Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02770
Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 |
---|---|---|---|---|---|
remove | |||||
2,923,783 | - | MPMX20_02768 | 0.74 | -1.5 | |
2,923,783 | - | MPMX20_02768 | 0.74 | -1.0 | |
2,923,902 | - | -2.0 | |||
2,923,928 | + | -0.3 | |||
2,924,203 | - | MPMX20_02769 | 0.34 | -0.8 | |
2,924,317 | + | MPMX20_02769 | 0.49 | -0.2 | |
2,924,414 | + | MPMX20_02769 | 0.62 | -1.7 | |
2,924,421 | + | MPMX20_02769 | 0.63 | -0.7 | |
2,924,527 | + | MPMX20_02769 | 0.77 | -1.0 | |
2,924,535 | - | MPMX20_02769 | 0.79 | -0.1 | |
2,924,577 | + | MPMX20_02769 | 0.84 | -0.6 | |
2,924,577 | + | MPMX20_02769 | 0.84 | -0.3 | |
2,924,650 | + | +0.8 | |||
2,924,658 | - | -1.1 | |||
2,924,668 | - | -0.5 | |||
2,924,668 | - | +0.7 | |||
2,924,780 | + | MPMX20_02770 | 0.13 | -0.6 | |
2,924,783 | - | MPMX20_02770 | 0.14 | -0.3 | |
2,924,788 | - | MPMX20_02770 | 0.15 | +1.5 | |
2,924,788 | - | MPMX20_02770 | 0.15 | -1.7 | |
2,924,944 | - | MPMX20_02770 | 0.50 | -2.8 | |
2,924,962 | - | MPMX20_02770 | 0.54 | -0.7 | |
2,924,989 | - | MPMX20_02770 | 0.60 | -0.6 | |
2,925,041 | + | MPMX20_02770 | 0.72 | -1.9 | |
2,925,041 | + | MPMX20_02770 | 0.72 | -1.0 | |
2,925,049 | - | MPMX20_02770 | 0.74 | -2.3 | |
2,925,049 | - | MPMX20_02770 | 0.74 | -2.3 | |
2,925,151 | + | +0.6 |
Or see this region's nucleotide sequence