Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02102 and MPMX20_02103 are separated by 631 nucleotides MPMX20_02103 and MPMX20_02104 are separated by 184 nucleotides
MPMX20_02102: MPMX20_02102 - hypothetical protein, at 2,196,594 to 2,198,408
_02102
MPMX20_02103: MPMX20_02103 - hypothetical protein, at 2,199,040 to 2,199,216
_02103
MPMX20_02104: MPMX20_02104 - hypothetical protein, at 2,199,401 to 2,199,811
_02104
Position (kb)
2196
2197
2198
2199 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2196.679 kb on + strand at 2197.119 kb on + strand, within MPMX20_02102 at 2197.878 kb on + strand, within MPMX20_02102 at 2198.624 kb on - strand at 2198.801 kb on - strand at 2198.814 kb on - strand at 2198.846 kb on - strand at 2198.846 kb on - strand at 2198.858 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.882 kb on - strand at 2198.882 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.907 kb on - strand at 2198.911 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.924 kb on - strand at 2198.927 kb on + strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.946 kb on + strand at 2198.954 kb on - strand at 2198.954 kb on - strand at 2198.954 kb on - strand at 2199.011 kb on - strand at 2199.023 kb on - strand at 2199.028 kb on - strand at 2199.046 kb on - strand at 2199.064 kb on - strand, within MPMX20_02103 at 2199.065 kb on - strand, within MPMX20_02103 at 2199.071 kb on - strand, within MPMX20_02103 at 2199.071 kb on - strand, within MPMX20_02103 at 2199.075 kb on - strand, within MPMX20_02103 at 2199.076 kb on + strand, within MPMX20_02103 at 2199.079 kb on - strand, within MPMX20_02103 at 2199.089 kb on - strand, within MPMX20_02103 at 2199.089 kb on - strand, within MPMX20_02103 at 2199.089 kb on - strand, within MPMX20_02103 at 2199.096 kb on - strand, within MPMX20_02103 at 2199.114 kb on - strand, within MPMX20_02103 at 2199.118 kb on + strand, within MPMX20_02103 at 2199.121 kb on - strand, within MPMX20_02103 at 2199.132 kb on + strand, within MPMX20_02103 at 2199.135 kb on - strand, within MPMX20_02103 at 2199.137 kb on - strand, within MPMX20_02103 at 2199.142 kb on - strand, within MPMX20_02103 at 2199.190 kb on + strand, within MPMX20_02103 at 2199.193 kb on - strand, within MPMX20_02103 at 2199.196 kb on + strand, within MPMX20_02103 at 2199.196 kb on + strand, within MPMX20_02103 at 2199.201 kb on + strand at 2199.204 kb on - strand at 2199.204 kb on - strand at 2199.206 kb on + strand at 2199.214 kb on - strand at 2199.318 kb on + strand at 2199.318 kb on + strand at 2199.321 kb on - strand at 2199.326 kb on - strand at 2199.326 kb on - strand at 2199.326 kb on - strand at 2199.326 kb on - strand at 2199.335 kb on + strand at 2199.352 kb on + strand at 2199.352 kb on + strand at 2199.360 kb on - strand at 2199.360 kb on - strand at 2199.362 kb on - strand at 2199.399 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 remove 2,196,679 + -1.4 2,197,119 + MPMX20_02102 0.29 -0.9 2,197,878 + MPMX20_02102 0.71 -1.4 2,198,624 - +1.6 2,198,801 - -0.9 2,198,814 - -1.3 2,198,846 - -0.4 2,198,846 - -1.1 2,198,858 - +0.6 2,198,877 - -0.9 2,198,877 - +1.0 2,198,877 - +0.4 2,198,877 - -0.6 2,198,877 - +1.6 2,198,882 - +0.5 2,198,882 - +1.2 2,198,887 - +1.0 2,198,887 - +0.2 2,198,887 - -0.5 2,198,887 - -0.1 2,198,887 - +0.2 2,198,887 - -1.4 2,198,887 - -0.0 2,198,887 - -1.2 2,198,887 - +0.2 2,198,887 - -0.3 2,198,887 - -0.2 2,198,887 - -0.1 2,198,887 - +0.5 2,198,887 - +1.0 2,198,887 - +0.6 2,198,887 - +0.7 2,198,887 - -1.4 2,198,887 - +0.6 2,198,887 - -1.3 2,198,887 - +1.4 2,198,887 - -0.7 2,198,887 - +1.4 2,198,887 - +0.9 2,198,887 - -0.7 2,198,887 - +0.3 2,198,887 - +0.8 2,198,887 - -0.5 2,198,887 - -0.4 2,198,892 - -0.6 2,198,892 - -3.0 2,198,892 - -0.7 2,198,892 - +0.4 2,198,892 - +0.5 2,198,892 - -0.5 2,198,892 - -1.0 2,198,892 - -0.2 2,198,892 - -1.5 2,198,892 - +0.5 2,198,892 - +0.0 2,198,892 - +0.6 2,198,892 - +1.1 2,198,892 - +0.7 2,198,892 - -0.2 2,198,892 - -0.0 2,198,892 - +0.0 2,198,892 - -0.8 2,198,892 - +0.0 2,198,892 - +0.2 2,198,892 - +0.0 2,198,892 - +2.8 2,198,892 - +0.7 2,198,892 - -0.1 2,198,892 - +0.4 2,198,892 - +1.1 2,198,892 - +0.4 2,198,892 - -3.2 2,198,892 - -0.9 2,198,892 - -0.7 2,198,892 - +0.1 2,198,892 - +0.7 2,198,892 - -1.0 2,198,892 - +0.2 2,198,892 - -1.5 2,198,892 - +0.7 2,198,892 - -0.8 2,198,892 - -0.3 2,198,892 - +1.7 2,198,892 - +0.4 2,198,892 - +1.0 2,198,892 - +0.9 2,198,892 - +0.4 2,198,892 - -0.0 2,198,892 - +1.3 2,198,892 - -0.7 2,198,892 - +0.7 2,198,892 - -1.7 2,198,892 - +1.7 2,198,892 - -0.0 2,198,892 - -0.8 2,198,892 - +1.1 2,198,892 - +0.3 2,198,892 - +0.4 2,198,897 - +0.8 2,198,897 - -0.2 2,198,897 - -0.9 2,198,897 - -1.1 2,198,897 - +0.6 2,198,897 - +1.0 2,198,897 - +0.4 2,198,897 - -0.5 2,198,897 - +1.0 2,198,897 - +0.5 2,198,897 - -0.3 2,198,897 - +0.2 2,198,897 - +0.4 2,198,897 - +0.4 2,198,897 - -0.9 2,198,897 - +2.0 2,198,897 - -2.1 2,198,897 - -0.0 2,198,897 - +0.2 2,198,897 - -1.8 2,198,897 - -1.8 2,198,897 - +0.3 2,198,897 - +0.7 2,198,897 - +0.9 2,198,897 - -0.1 2,198,897 - -1.1 2,198,897 - -0.8 2,198,897 - -1.0 2,198,897 - -0.8 2,198,897 - -1.0 2,198,897 - -0.2 2,198,897 - -0.9 2,198,897 - +0.2 2,198,897 - +0.7 2,198,897 - -0.6 2,198,897 - -0.2 2,198,897 - +0.9 2,198,897 - +1.6 2,198,897 - +0.6 2,198,897 - +1.4 2,198,897 - +0.5 2,198,897 - +0.2 2,198,897 - +1.2 2,198,897 - -0.5 2,198,897 - -0.8 2,198,897 - -1.1 2,198,897 - +0.0 2,198,897 - +3.0 2,198,897 - -0.7 2,198,897 - -0.0 2,198,897 - -1.7 2,198,897 - +0.3 2,198,897 - -0.0 2,198,897 - -0.7 2,198,897 - -1.2 2,198,897 - -2.9 2,198,897 - +1.2 2,198,897 - +0.6 2,198,897 - -0.8 2,198,897 - -1.8 2,198,897 - +0.8 2,198,897 - -0.2 2,198,897 - -0.3 2,198,897 - -1.2 2,198,897 - +0.7 2,198,897 - -0.2 2,198,897 - +0.3 2,198,897 - -0.1 2,198,897 - -0.4 2,198,897 - -0.4 2,198,897 - +1.7 2,198,897 - -0.7 2,198,897 - -0.5 2,198,897 - +0.1 2,198,897 - +3.7 2,198,897 - +1.7 2,198,897 - +0.2 2,198,897 - -1.2 2,198,897 - -2.0 2,198,897 - +0.5 2,198,897 - +1.2 2,198,897 - +0.6 2,198,897 - -0.5 2,198,897 - +0.3 2,198,897 - +1.0 2,198,897 - -0.7 2,198,897 - +0.3 2,198,897 - -1.6 2,198,897 - +0.1 2,198,897 - -1.9 2,198,897 - -0.5 2,198,897 - -0.7 2,198,897 - -1.4 2,198,902 - +0.3 2,198,902 - -2.0 2,198,902 - -1.6 2,198,902 - +0.9 2,198,902 - -0.0 2,198,902 - +0.3 2,198,902 - +0.6 2,198,902 - -1.0 2,198,902 - +0.1 2,198,902 - +1.6 2,198,902 - -1.0 2,198,902 - -0.2 2,198,902 - +0.9 2,198,902 - +2.0 2,198,902 - -1.5 2,198,902 - +0.6 2,198,902 - -2.2 2,198,902 - +0.9 2,198,902 - -0.7 2,198,902 - +0.3 2,198,902 - +0.6 2,198,902 - -0.3 2,198,902 - +1.5 2,198,902 - +0.1 2,198,902 - +0.8 2,198,902 - -1.0 2,198,902 - +1.1 2,198,902 - +0.2 2,198,902 - +0.2 2,198,902 - +0.5 2,198,902 - +0.2 2,198,902 - -0.4 2,198,902 - -0.1 2,198,902 - -3.1 2,198,902 - +0.7 2,198,902 - +0.8 2,198,902 - -0.7 2,198,907 - +0.9 2,198,911 - -0.8 2,198,919 - -2.4 2,198,919 - +3.3 2,198,919 - -0.3 2,198,919 - +1.3 2,198,919 - -0.2 2,198,919 - -0.7 2,198,919 - -0.0 2,198,924 - -2.3 2,198,927 + +0.5 2,198,935 - -1.0 2,198,935 - -1.6 2,198,935 - +0.6 2,198,935 - -0.8 2,198,935 - -1.6 2,198,935 - -2.0 2,198,935 - +1.2 2,198,935 - +1.3 2,198,935 - -1.0 2,198,946 + -0.8 2,198,954 - -1.6 2,198,954 - +0.4 2,198,954 - +0.8 2,199,011 - +2.0 2,199,023 - +0.1 2,199,028 - -0.5 2,199,046 - -1.7 2,199,064 - MPMX20_02103 0.14 -2.6 2,199,065 - MPMX20_02103 0.14 +0.7 2,199,071 - MPMX20_02103 0.18 +0.8 2,199,071 - MPMX20_02103 0.18 -1.3 2,199,075 - MPMX20_02103 0.20 -0.7 2,199,076 + MPMX20_02103 0.20 +0.7 2,199,079 - MPMX20_02103 0.22 +1.0 2,199,089 - MPMX20_02103 0.28 +1.2 2,199,089 - MPMX20_02103 0.28 +0.3 2,199,089 - MPMX20_02103 0.28 +0.4 2,199,096 - MPMX20_02103 0.32 +0.7 2,199,114 - MPMX20_02103 0.42 +1.1 2,199,118 + MPMX20_02103 0.44 -1.6 2,199,121 - MPMX20_02103 0.46 +0.6 2,199,132 + MPMX20_02103 0.52 -0.5 2,199,135 - MPMX20_02103 0.54 +0.3 2,199,137 - MPMX20_02103 0.55 +0.1 2,199,142 - MPMX20_02103 0.58 +0.5 2,199,190 + MPMX20_02103 0.85 -0.9 2,199,193 - MPMX20_02103 0.86 -2.4 2,199,196 + MPMX20_02103 0.88 -0.2 2,199,196 + MPMX20_02103 0.88 -0.3 2,199,201 + -1.0 2,199,204 - +0.2 2,199,204 - +0.1 2,199,206 + -0.8 2,199,214 - +0.2 2,199,318 + +0.3 2,199,318 + +0.4 2,199,321 - -0.4 2,199,326 - +0.8 2,199,326 - +2.0 2,199,326 - +0.2 2,199,326 - -1.1 2,199,335 + -0.2 2,199,352 + +0.2 2,199,352 + +0.0 2,199,360 - +0.5 2,199,360 - -1.1 2,199,362 - +0.1 2,199,399 - -0.6
Or see this region's nucleotide sequence