Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01570
Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 |
---|---|---|---|---|---|
remove | |||||
1,651,522 | + | -0.1 | |||
1,651,769 | + | MPMX20_01570 | 0.15 | -1.9 | |
1,651,777 | - | MPMX20_01570 | 0.17 | -1.9 | |
1,651,833 | + | MPMX20_01570 | 0.37 | -3.0 | |
1,651,833 | + | MPMX20_01570 | 0.37 | -2.3 | |
1,651,833 | + | MPMX20_01570 | 0.37 | -0.7 | |
1,652,195 | + | -0.4 | |||
1,652,209 | + | -0.2 | |||
1,652,209 | + | +1.5 | |||
1,652,211 | - | -0.8 | |||
1,652,217 | - | -1.0 | |||
1,652,219 | + | +0.7 | |||
1,652,227 | - | +1.0 | |||
1,652,275 | + | -1.9 | |||
1,652,304 | + | +0.5 | |||
1,652,336 | + | -0.4 | |||
1,652,512 | - | MPMX20_01571 | 0.12 | +0.5 | |
1,652,536 | + | MPMX20_01571 | 0.14 | -1.3 | |
1,652,541 | + | MPMX20_01571 | 0.14 | -0.0 | |
1,652,610 | + | MPMX20_01571 | 0.17 | +0.6 | |
1,652,610 | + | MPMX20_01571 | 0.17 | +0.3 | |
1,652,618 | - | MPMX20_01571 | 0.17 | +1.4 | |
1,652,686 | + | MPMX20_01571 | 0.20 | -1.1 | |
1,652,813 | + | MPMX20_01571 | 0.26 | -0.8 | |
1,652,842 | + | MPMX20_01571 | 0.27 | +0.3 | |
1,652,842 | + | MPMX20_01571 | 0.27 | -0.7 | |
1,652,843 | + | MPMX20_01571 | 0.27 | +0.2 | |
1,652,850 | - | MPMX20_01571 | 0.27 | -1.1 | |
1,652,851 | - | MPMX20_01571 | 0.27 | +1.3 |
Or see this region's nucleotide sequence