Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01097 and MPMX20_01098 overlap by 4 nucleotides MPMX20_01098 and MPMX20_01099 are separated by 212 nucleotides MPMX20_01099 and MPMX20_01100 are separated by 137 nucleotides
MPMX20_01097: MPMX20_01097 - N5-carboxyaminoimidazole ribonucleotide synthase, at 1,157,710 to 1,158,777
_01097
MPMX20_01098: MPMX20_01098 - N5-carboxyaminoimidazole ribonucleotide mutase, at 1,158,774 to 1,159,283
_01098
MPMX20_01099: MPMX20_01099 - hypothetical protein, at 1,159,496 to 1,159,705
_01099
MPMX20_01100: MPMX20_01100 - UDP-2,3-diacylglucosamine hydrolase, at 1,159,843 to 1,160,565
_01100
Position (kb)
1158
1159
1160 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1157.843 kb on - strand, within MPMX20_01097 at 1157.889 kb on + strand, within MPMX20_01097 at 1157.997 kb on + strand, within MPMX20_01097 at 1158.051 kb on - strand, within MPMX20_01097 at 1158.057 kb on + strand, within MPMX20_01097 at 1158.057 kb on + strand, within MPMX20_01097 at 1158.144 kb on - strand, within MPMX20_01097 at 1158.174 kb on + strand, within MPMX20_01097 at 1158.179 kb on + strand, within MPMX20_01097 at 1158.179 kb on + strand, within MPMX20_01097 at 1158.187 kb on - strand, within MPMX20_01097 at 1158.239 kb on - strand, within MPMX20_01097 at 1158.263 kb on - strand, within MPMX20_01097 at 1158.270 kb on - strand, within MPMX20_01097 at 1158.299 kb on + strand, within MPMX20_01097 at 1158.318 kb on + strand, within MPMX20_01097 at 1158.326 kb on - strand, within MPMX20_01097 at 1158.326 kb on - strand, within MPMX20_01097 at 1158.387 kb on + strand, within MPMX20_01097 at 1158.387 kb on + strand, within MPMX20_01097 at 1158.387 kb on + strand, within MPMX20_01097 at 1158.395 kb on - strand, within MPMX20_01097 at 1158.395 kb on - strand, within MPMX20_01097 at 1158.609 kb on - strand, within MPMX20_01097 at 1158.709 kb on - strand at 1158.801 kb on + strand at 1158.801 kb on + strand at 1158.816 kb on + strand at 1158.816 kb on + strand at 1158.816 kb on + strand at 1158.857 kb on - strand, within MPMX20_01098 at 1158.972 kb on - strand, within MPMX20_01098 at 1158.987 kb on + strand, within MPMX20_01098 at 1158.987 kb on + strand, within MPMX20_01098 at 1158.995 kb on - strand, within MPMX20_01098 at 1159.014 kb on + strand, within MPMX20_01098 at 1159.069 kb on - strand, within MPMX20_01098 at 1159.091 kb on + strand, within MPMX20_01098 at 1159.141 kb on + strand, within MPMX20_01098 at 1159.149 kb on - strand, within MPMX20_01098 at 1159.149 kb on - strand, within MPMX20_01098 at 1159.231 kb on + strand, within MPMX20_01098 at 1159.239 kb on - strand at 1159.515 kb on - strand at 1159.612 kb on + strand, within MPMX20_01099 at 1159.615 kb on - strand, within MPMX20_01099 at 1159.626 kb on + strand, within MPMX20_01099 at 1159.747 kb on + strand at 1159.781 kb on - strand at 1159.871 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 remove 1,157,843 - MPMX20_01097 0.12 -0.9 1,157,889 + MPMX20_01097 0.17 -0.9 1,157,997 + MPMX20_01097 0.27 +0.8 1,158,051 - MPMX20_01097 0.32 -2.4 1,158,057 + MPMX20_01097 0.32 -0.5 1,158,057 + MPMX20_01097 0.32 -0.5 1,158,144 - MPMX20_01097 0.41 -0.2 1,158,174 + MPMX20_01097 0.43 -1.8 1,158,179 + MPMX20_01097 0.44 +2.0 1,158,179 + MPMX20_01097 0.44 -0.8 1,158,187 - MPMX20_01097 0.45 -0.1 1,158,239 - MPMX20_01097 0.50 -2.0 1,158,263 - MPMX20_01097 0.52 +0.4 1,158,270 - MPMX20_01097 0.52 -0.1 1,158,299 + MPMX20_01097 0.55 -2.8 1,158,318 + MPMX20_01097 0.57 -2.6 1,158,326 - MPMX20_01097 0.58 -1.7 1,158,326 - MPMX20_01097 0.58 -0.4 1,158,387 + MPMX20_01097 0.63 -1.0 1,158,387 + MPMX20_01097 0.63 -3.7 1,158,387 + MPMX20_01097 0.63 -2.0 1,158,395 - MPMX20_01097 0.64 -3.1 1,158,395 - MPMX20_01097 0.64 +2.0 1,158,609 - MPMX20_01097 0.84 -2.0 1,158,709 - -0.8 1,158,801 + -2.3 1,158,801 + -0.6 1,158,816 + -0.5 1,158,816 + -1.2 1,158,816 + -1.3 1,158,857 - MPMX20_01098 0.16 +0.6 1,158,972 - MPMX20_01098 0.39 +0.3 1,158,987 + MPMX20_01098 0.42 -1.5 1,158,987 + MPMX20_01098 0.42 -0.6 1,158,995 - MPMX20_01098 0.43 -2.2 1,159,014 + MPMX20_01098 0.47 -2.4 1,159,069 - MPMX20_01098 0.58 -1.7 1,159,091 + MPMX20_01098 0.62 -1.9 1,159,141 + MPMX20_01098 0.72 +1.2 1,159,149 - MPMX20_01098 0.74 -1.8 1,159,149 - MPMX20_01098 0.74 -0.6 1,159,231 + MPMX20_01098 0.90 -0.4 1,159,239 - +2.0 1,159,515 - +0.7 1,159,612 + MPMX20_01099 0.55 -0.6 1,159,615 - MPMX20_01099 0.57 +3.0 1,159,626 + MPMX20_01099 0.62 -0.4 1,159,747 + -1.1 1,159,781 - +0.4 1,159,871 - -0.3
Or see this region's nucleotide sequence