Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00747

Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00745 and MPMX20_00746 are separated by 4 nucleotidesMPMX20_00746 and MPMX20_00747 are separated by 3 nucleotidesMPMX20_00747 and MPMX20_00748 overlap by 4 nucleotidesMPMX20_00748 and MPMX20_00749 overlap by 1 nucleotides MPMX20_00745: MPMX20_00745 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical, at 771,036 to 771,884 _00745 MPMX20_00746: MPMX20_00746 - Protein ApaG, at 771,889 to 772,266 _00746 MPMX20_00747: MPMX20_00747 - Ribosomal RNA small subunit methyltransferase A, at 772,270 to 773,091 _00747 MPMX20_00748: MPMX20_00748 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 773,088 to 774,074 _00748 MPMX20_00749: MPMX20_00749 - Chaperone SurA, at 774,074 to 775,360 _00749 Position (kb) 772 773 774Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 771.372 kb on + strand, within MPMX20_00745at 771.380 kb on - strand, within MPMX20_00745at 771.471 kb on - strand, within MPMX20_00745at 771.596 kb on - strand, within MPMX20_00745at 771.622 kb on + strand, within MPMX20_00745at 771.693 kb on + strand, within MPMX20_00745at 771.701 kb on - strand, within MPMX20_00745at 771.701 kb on - strand, within MPMX20_00745at 771.720 kb on - strand, within MPMX20_00745at 771.814 kb on - strandat 771.821 kb on + strandat 771.842 kb on - strandat 771.870 kb on - strandat 771.976 kb on + strand, within MPMX20_00746at 771.994 kb on - strand, within MPMX20_00746at 771.994 kb on - strand, within MPMX20_00746at 771.994 kb on - strand, within MPMX20_00746at 772.046 kb on + strand, within MPMX20_00746at 772.132 kb on + strand, within MPMX20_00746at 772.268 kb on + strandat 772.276 kb on - strandat 772.321 kb on + strandat 772.329 kb on - strandat 772.329 kb on - strandat 772.442 kb on - strand, within MPMX20_00747at 772.442 kb on - strand, within MPMX20_00747at 772.459 kb on - strand, within MPMX20_00747at 772.473 kb on + strand, within MPMX20_00747at 772.506 kb on + strand, within MPMX20_00747at 772.506 kb on + strand, within MPMX20_00747at 772.526 kb on - strand, within MPMX20_00747at 772.528 kb on + strand, within MPMX20_00747at 772.553 kb on - strand, within MPMX20_00747at 772.573 kb on - strand, within MPMX20_00747at 772.626 kb on - strand, within MPMX20_00747at 772.626 kb on - strand, within MPMX20_00747at 772.724 kb on - strand, within MPMX20_00747at 772.877 kb on - strand, within MPMX20_00747at 772.920 kb on - strand, within MPMX20_00747at 772.939 kb on - strand, within MPMX20_00747at 772.944 kb on - strand, within MPMX20_00747at 772.953 kb on - strand, within MPMX20_00747at 772.980 kb on - strand, within MPMX20_00747at 773.071 kb on - strandat 773.076 kb on - strandat 773.152 kb on + strandat 773.155 kb on - strandat 773.157 kb on + strandat 773.157 kb on + strandat 773.157 kb on + strandat 773.157 kb on + strandat 773.177 kb on + strandat 773.180 kb on - strandat 773.182 kb on + strandat 773.249 kb on - strand, within MPMX20_00748at 773.249 kb on - strand, within MPMX20_00748at 773.255 kb on - strand, within MPMX20_00748at 773.335 kb on - strand, within MPMX20_00748at 773.360 kb on + strand, within MPMX20_00748at 773.369 kb on - strand, within MPMX20_00748at 773.450 kb on + strand, within MPMX20_00748at 773.463 kb on + strand, within MPMX20_00748at 773.546 kb on + strand, within MPMX20_00748at 773.554 kb on - strand, within MPMX20_00748at 773.561 kb on + strand, within MPMX20_00748at 773.633 kb on + strand, within MPMX20_00748at 773.641 kb on - strand, within MPMX20_00748at 773.694 kb on - strand, within MPMX20_00748at 773.806 kb on + strand, within MPMX20_00748at 773.855 kb on + strand, within MPMX20_00748at 773.855 kb on + strand, within MPMX20_00748at 773.899 kb on - strand, within MPMX20_00748at 773.907 kb on - strand, within MPMX20_00748at 773.914 kb on + strand, within MPMX20_00748at 773.933 kb on + strand, within MPMX20_00748at 774.061 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
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771,372 + MPMX20_00745 0.40 -0.1
771,380 - MPMX20_00745 0.41 -0.3
771,471 - MPMX20_00745 0.51 -1.8
771,596 - MPMX20_00745 0.66 +1.0
771,622 + MPMX20_00745 0.69 -0.0
771,693 + MPMX20_00745 0.77 -2.4
771,701 - MPMX20_00745 0.78 -0.7
771,701 - MPMX20_00745 0.78 -1.6
771,720 - MPMX20_00745 0.81 -1.0
771,814 - -2.2
771,821 + +1.1
771,842 - -1.8
771,870 - -1.2
771,976 + MPMX20_00746 0.23 -1.3
771,994 - MPMX20_00746 0.28 +0.4
771,994 - MPMX20_00746 0.28 -1.1
771,994 - MPMX20_00746 0.28 +4.3
772,046 + MPMX20_00746 0.42 +0.5
772,132 + MPMX20_00746 0.64 +2.2
772,268 + -1.8
772,276 - +1.4
772,321 + +1.0
772,329 - +0.2
772,329 - +2.0
772,442 - MPMX20_00747 0.21 +1.8
772,442 - MPMX20_00747 0.21 -0.8
772,459 - MPMX20_00747 0.23 -2.3
772,473 + MPMX20_00747 0.25 -1.3
772,506 + MPMX20_00747 0.29 +1.0
772,506 + MPMX20_00747 0.29 -1.7
772,526 - MPMX20_00747 0.31 +0.8
772,528 + MPMX20_00747 0.31 -2.8
772,553 - MPMX20_00747 0.34 -1.9
772,573 - MPMX20_00747 0.37 -0.8
772,626 - MPMX20_00747 0.43 -1.7
772,626 - MPMX20_00747 0.43 -0.4
772,724 - MPMX20_00747 0.55 -0.0
772,877 - MPMX20_00747 0.74 -1.7
772,920 - MPMX20_00747 0.79 -1.8
772,939 - MPMX20_00747 0.81 -1.6
772,944 - MPMX20_00747 0.82 -1.2
772,953 - MPMX20_00747 0.83 -1.0
772,980 - MPMX20_00747 0.86 -0.5
773,071 - -3.3
773,076 - -0.4
773,152 + -2.7
773,155 - -0.8
773,157 + -0.5
773,157 + -0.8
773,157 + -0.7
773,157 + +0.4
773,177 + -0.5
773,180 - -0.0
773,182 + -0.5
773,249 - MPMX20_00748 0.16 +0.5
773,249 - MPMX20_00748 0.16 -0.5
773,255 - MPMX20_00748 0.17 -0.3
773,335 - MPMX20_00748 0.25 +0.6
773,360 + MPMX20_00748 0.28 +0.3
773,369 - MPMX20_00748 0.28 -0.2
773,450 + MPMX20_00748 0.37 +0.8
773,463 + MPMX20_00748 0.38 +0.0
773,546 + MPMX20_00748 0.46 +0.7
773,554 - MPMX20_00748 0.47 +2.3
773,561 + MPMX20_00748 0.48 -1.7
773,633 + MPMX20_00748 0.55 -0.2
773,641 - MPMX20_00748 0.56 +0.3
773,694 - MPMX20_00748 0.61 -1.4
773,806 + MPMX20_00748 0.73 -2.8
773,855 + MPMX20_00748 0.78 +2.0
773,855 + MPMX20_00748 0.78 -1.0
773,899 - MPMX20_00748 0.82 -0.1
773,907 - MPMX20_00748 0.83 +0.6
773,914 + MPMX20_00748 0.84 -1.3
773,933 + MPMX20_00748 0.86 -0.5
774,061 - -0.1

Or see this region's nucleotide sequence