Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00743 and MPMX20_00744 are separated by 114 nucleotides MPMX20_00744 and MPMX20_00745 are separated by 39 nucleotides MPMX20_00745 and MPMX20_00746 are separated by 4 nucleotides MPMX20_00746 and MPMX20_00747 are separated by 3 nucleotides
MPMX20_00743: MPMX20_00743 - Glutathione-regulated potassium-efflux system protein KefC, at 768,537 to 770,402
_00743
MPMX20_00744: MPMX20_00744 - IS1595 family transposase ISSsu9, at 770,517 to 770,996
_00744
MPMX20_00745: MPMX20_00745 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical, at 771,036 to 771,884
_00745
MPMX20_00746: MPMX20_00746 - Protein ApaG, at 771,889 to 772,266
_00746
MPMX20_00747: MPMX20_00747 - Ribosomal RNA small subunit methyltransferase A, at 772,270 to 773,091
_00747
Position (kb) 771
772 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 770.067 kb on - strand, within MPMX20_00743 at 770.073 kb on - strand, within MPMX20_00743 at 770.098 kb on - strand, within MPMX20_00743 at 770.102 kb on + strand, within MPMX20_00743 at 770.199 kb on + strand, within MPMX20_00743 at 770.215 kb on - strand, within MPMX20_00743 at 770.319 kb on - strand at 770.346 kb on - strand at 770.456 kb on - strand at 771.024 kb on + strand at 771.123 kb on + strand, within MPMX20_00745 at 771.123 kb on + strand, within MPMX20_00745 at 771.123 kb on + strand, within MPMX20_00745 at 771.131 kb on - strand, within MPMX20_00745 at 771.131 kb on - strand, within MPMX20_00745 at 771.178 kb on - strand, within MPMX20_00745 at 771.234 kb on - strand, within MPMX20_00745 at 771.372 kb on + strand, within MPMX20_00745 at 771.380 kb on - strand, within MPMX20_00745 at 771.471 kb on - strand, within MPMX20_00745 at 771.596 kb on - strand, within MPMX20_00745 at 771.622 kb on + strand, within MPMX20_00745 at 771.693 kb on + strand, within MPMX20_00745 at 771.701 kb on - strand, within MPMX20_00745 at 771.701 kb on - strand, within MPMX20_00745 at 771.720 kb on - strand, within MPMX20_00745 at 771.814 kb on - strand at 771.821 kb on + strand at 771.842 kb on - strand at 771.870 kb on - strand at 771.976 kb on + strand, within MPMX20_00746 at 771.994 kb on - strand, within MPMX20_00746 at 771.994 kb on - strand, within MPMX20_00746 at 771.994 kb on - strand, within MPMX20_00746 at 772.046 kb on + strand, within MPMX20_00746 at 772.132 kb on + strand, within MPMX20_00746 at 772.268 kb on + strand at 772.276 kb on - strand at 772.321 kb on + strand at 772.329 kb on - strand at 772.329 kb on - strand at 772.442 kb on - strand, within MPMX20_00747 at 772.442 kb on - strand, within MPMX20_00747 at 772.459 kb on - strand, within MPMX20_00747 at 772.473 kb on + strand, within MPMX20_00747 at 772.506 kb on + strand, within MPMX20_00747 at 772.506 kb on + strand, within MPMX20_00747 at 772.526 kb on - strand, within MPMX20_00747 at 772.528 kb on + strand, within MPMX20_00747 at 772.553 kb on - strand, within MPMX20_00747 at 772.573 kb on - strand, within MPMX20_00747 at 772.626 kb on - strand, within MPMX20_00747 at 772.626 kb on - strand, within MPMX20_00747 at 772.724 kb on - strand, within MPMX20_00747 at 772.877 kb on - strand, within MPMX20_00747
Per-strain Table
Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 remove 770,067 - MPMX20_00743 0.82 +0.2 770,073 - MPMX20_00743 0.82 -0.0 770,098 - MPMX20_00743 0.84 +0.3 770,102 + MPMX20_00743 0.84 -0.7 770,199 + MPMX20_00743 0.89 +0.3 770,215 - MPMX20_00743 0.90 -1.1 770,319 - +3.6 770,346 - +0.1 770,456 - -2.2 771,024 + -0.1 771,123 + MPMX20_00745 0.10 -1.6 771,123 + MPMX20_00745 0.10 -0.6 771,123 + MPMX20_00745 0.10 -2.3 771,131 - MPMX20_00745 0.11 +0.1 771,131 - MPMX20_00745 0.11 +0.8 771,178 - MPMX20_00745 0.17 -0.6 771,234 - MPMX20_00745 0.23 -0.8 771,372 + MPMX20_00745 0.40 -0.1 771,380 - MPMX20_00745 0.41 -0.3 771,471 - MPMX20_00745 0.51 -1.8 771,596 - MPMX20_00745 0.66 +1.0 771,622 + MPMX20_00745 0.69 -0.0 771,693 + MPMX20_00745 0.77 -2.4 771,701 - MPMX20_00745 0.78 -0.7 771,701 - MPMX20_00745 0.78 -1.6 771,720 - MPMX20_00745 0.81 -1.0 771,814 - -2.2 771,821 + +1.1 771,842 - -1.8 771,870 - -1.2 771,976 + MPMX20_00746 0.23 -1.3 771,994 - MPMX20_00746 0.28 +0.4 771,994 - MPMX20_00746 0.28 -1.1 771,994 - MPMX20_00746 0.28 +4.3 772,046 + MPMX20_00746 0.42 +0.5 772,132 + MPMX20_00746 0.64 +2.2 772,268 + -1.8 772,276 - +1.4 772,321 + +1.0 772,329 - +0.2 772,329 - +2.0 772,442 - MPMX20_00747 0.21 +1.8 772,442 - MPMX20_00747 0.21 -0.8 772,459 - MPMX20_00747 0.23 -2.3 772,473 + MPMX20_00747 0.25 -1.3 772,506 + MPMX20_00747 0.29 +1.0 772,506 + MPMX20_00747 0.29 -1.7 772,526 - MPMX20_00747 0.31 +0.8 772,528 + MPMX20_00747 0.31 -2.8 772,553 - MPMX20_00747 0.34 -1.9 772,573 - MPMX20_00747 0.37 -0.8 772,626 - MPMX20_00747 0.43 -1.7 772,626 - MPMX20_00747 0.43 -0.4 772,724 - MPMX20_00747 0.55 -0.0 772,877 - MPMX20_00747 0.74 -1.7
Or see this region's nucleotide sequence