Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00720 and MPMX20_00721 are separated by 87 nucleotides MPMX20_00721 and MPMX20_00722 are separated by 182 nucleotides
MPMX20_00720: MPMX20_00720 - Chaperone protein DnaK, at 742,837 to 744,750
_00720
MPMX20_00721: MPMX20_00721 - Chaperone protein DnaJ, at 744,838 to 745,983
_00721
MPMX20_00722: MPMX20_00722 - Na(+)/H(+) antiporter NhaA, at 746,166 to 747,341
_00722
Position (kb) 744
745
746 Strain fitness (log2 ratio) -2
-1
0
1 at 744.347 kb on + strand, within MPMX20_00720 at 744.347 kb on + strand, within MPMX20_00720 at 744.533 kb on + strand, within MPMX20_00720 at 744.609 kb on + strand at 744.666 kb on + strand at 744.783 kb on + strand at 745.235 kb on - strand, within MPMX20_00721 at 745.409 kb on + strand, within MPMX20_00721 at 745.412 kb on - strand, within MPMX20_00721 at 745.445 kb on - strand, within MPMX20_00721 at 745.456 kb on + strand, within MPMX20_00721 at 745.554 kb on - strand, within MPMX20_00721 at 745.636 kb on + strand, within MPMX20_00721 at 745.644 kb on - strand, within MPMX20_00721 at 745.737 kb on - strand, within MPMX20_00721 at 745.816 kb on - strand, within MPMX20_00721 at 745.977 kb on - strand at 746.122 kb on + strand at 746.123 kb on + strand at 746.154 kb on + strand at 746.156 kb on - strand at 746.162 kb on - strand at 746.162 kb on - strand at 746.209 kb on + strand at 746.252 kb on - strand at 746.345 kb on + strand, within MPMX20_00722 at 746.399 kb on + strand, within MPMX20_00722 at 746.587 kb on - strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.685 kb on + strand, within MPMX20_00722 at 746.692 kb on - strand, within MPMX20_00722 at 746.692 kb on - strand, within MPMX20_00722 at 746.692 kb on - strand, within MPMX20_00722 at 746.800 kb on + strand, within MPMX20_00722 at 746.923 kb on - strand, within MPMX20_00722
Per-strain Table
Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 remove 744,347 + MPMX20_00720 0.79 +1.0 744,347 + MPMX20_00720 0.79 -2.1 744,533 + MPMX20_00720 0.89 -0.6 744,609 + +0.1 744,666 + -0.0 744,783 + +0.1 745,235 - MPMX20_00721 0.35 -0.3 745,409 + MPMX20_00721 0.50 -1.5 745,412 - MPMX20_00721 0.50 -0.0 745,445 - MPMX20_00721 0.53 -1.0 745,456 + MPMX20_00721 0.54 -0.8 745,554 - MPMX20_00721 0.62 -1.2 745,636 + MPMX20_00721 0.70 -0.8 745,644 - MPMX20_00721 0.70 +1.1 745,737 - MPMX20_00721 0.78 -1.2 745,816 - MPMX20_00721 0.85 -1.3 745,977 - +1.0 746,122 + -0.1 746,123 + +0.7 746,154 + -0.2 746,156 - -0.4 746,162 - +0.4 746,162 - +0.6 746,209 + -0.8 746,252 - -1.5 746,345 + MPMX20_00722 0.15 -1.6 746,399 + MPMX20_00722 0.20 -0.0 746,587 - MPMX20_00722 0.36 +0.2 746,684 + MPMX20_00722 0.44 -0.2 746,684 + MPMX20_00722 0.44 +0.3 746,684 + MPMX20_00722 0.44 +0.4 746,684 + MPMX20_00722 0.44 -0.7 746,684 + MPMX20_00722 0.44 -1.6 746,684 + MPMX20_00722 0.44 -2.1 746,685 + MPMX20_00722 0.44 -1.2 746,692 - MPMX20_00722 0.45 -0.3 746,692 - MPMX20_00722 0.45 -1.5 746,692 - MPMX20_00722 0.45 -1.1 746,800 + MPMX20_00722 0.54 -2.0 746,923 - MPMX20_00722 0.64 -1.2
Or see this region's nucleotide sequence