Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS08240

Experiment: Anaerobic; FW104 COMM 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; FW104 COMM 1 X
1,758,854	-				-2.1
1,758,854	-				-3.3
1,758,854	-				-0.9
1,758,854	-				-1.7
1,758,854	-				-0.9
1,758,854	-				-2.1
1,758,881	+				-3.2
1,758,881	+				-2.4
1,758,905	-				-2.1
1,759,004	+				-4.3
1,759,005	-				-1.9
1,759,288	+		ABCV34_RS08235	0.37	-3.1
1,759,288	+		ABCV34_RS08235	0.37	-1.6
1,759,288	+		ABCV34_RS08235	0.37	-1.6
1,759,288	+		ABCV34_RS08235	0.37	-1.9
1,759,288	+		ABCV34_RS08235	0.37	-1.4
1,759,288	+		ABCV34_RS08235	0.37	-2.1
1,759,288	+		ABCV34_RS08235	0.37	-5.6
1,759,288	+		ABCV34_RS08235	0.37	-3.2
1,759,289	-		ABCV34_RS08235	0.37	-3.6
1,759,289	-		ABCV34_RS08235	0.37	-2.4
1,759,289	-		ABCV34_RS08235	0.37	-3.1
1,759,289	-		ABCV34_RS08235	0.37	-4.1
1,759,289	-		ABCV34_RS08235	0.37	-3.4
1,759,454	+		ABCV34_RS08235	0.56	-0.1
1,759,626	-		ABCV34_RS08235	0.75	-3.4
1,759,694	+		ABCV34_RS08235	0.83	-4.6
1,759,695	-		ABCV34_RS08235	0.83	-2.6
1,759,695	-		ABCV34_RS08235	0.83	-2.4
1,759,706	+		ABCV34_RS08235	0.84	-2.1
1,759,882	+				-1.8
1,759,882	+				-2.6
1,759,882	+				-2.4
1,759,882	+				-2.9
1,759,882	+				-1.5
1,759,882	+				-1.3
1,759,882	+				-2.2
1,759,882	+				-2.9
1,759,882	+				-2.2
1,759,882	+				-1.4
1,759,882	+				-0.1
1,759,882	+				-2.1
1,759,882	+				-2.1
1,759,882	+				-2.2
1,759,882	+				-2.3
1,759,882	+				-3.1
1,759,882	+				-2.1
1,759,882	+				-1.1
1,759,882	+				-1.4
1,759,882	+				-1.1
1,759,882	+				-1.1
1,759,882	+				-3.5
1,759,883	-				-3.4
1,759,883	-				-2.4
1,759,883	-				-2.4
1,759,883	-				+0.5
1,759,883	-				-2.6
1,759,883	-				+0.2
1,759,883	-				-1.9
1,759,883	-				-2.4
1,759,883	-				-1.4
1,759,883	-				-1.6
1,759,883	-				-0.8
1,759,936	+		ABCV34_RS08240	0.11	-2.9
1,759,936	+		ABCV34_RS08240	0.11	-3.2
1,759,936	+		ABCV34_RS08240	0.11	-2.6
1,759,936	+		ABCV34_RS08240	0.11	-2.4
1,759,936	+		ABCV34_RS08240	0.11	-4.4
1,759,936	+		ABCV34_RS08240	0.11	-1.7
1,759,936	+		ABCV34_RS08240	0.11	-3.1
1,759,936	+		ABCV34_RS08240	0.11	-1.6
1,759,936	+		ABCV34_RS08240	0.11	-2.1
1,759,936	+		ABCV34_RS08240	0.11	-3.0
1,759,936	+		ABCV34_RS08240	0.11	-2.1
1,759,936	+		ABCV34_RS08240	0.11	-2.6
1,759,936	+		ABCV34_RS08240	0.11	-1.3
1,759,937	-		ABCV34_RS08240	0.12	-2.4
1,759,937	-		ABCV34_RS08240	0.12	-2.5
1,759,937	-		ABCV34_RS08240	0.12	+1.9
1,759,937	-		ABCV34_RS08240	0.12	-1.8
1,759,937	-		ABCV34_RS08240	0.12	-1.4
1,759,937	-		ABCV34_RS08240	0.12	-1.4
1,759,937	-		ABCV34_RS08240	0.12	-1.1
1,759,937	-		ABCV34_RS08240	0.12	-1.9
1,759,937	-		ABCV34_RS08240	0.12	-2.1
1,759,937	-		ABCV34_RS08240	0.12	-1.6
1,759,937	-		ABCV34_RS08240	0.12	-0.8
1,759,937	-		ABCV34_RS08240	0.12	-2.4
1,759,937	-		ABCV34_RS08240	0.12	-0.6
1,759,937	-		ABCV34_RS08240	0.12	-1.4
1,759,937	-		ABCV34_RS08240	0.12	-2.2
1,759,937	-		ABCV34_RS08240	0.12	-2.1
1,760,054	+		ABCV34_RS08240	0.28	-0.8
1,760,054	+		ABCV34_RS08240	0.28	-1.9
1,760,054	+		ABCV34_RS08240	0.28	-2.4
1,760,054	+		ABCV34_RS08240	0.28	-1.4
1,760,054	+		ABCV34_RS08240	0.28	-1.6
1,760,054	+		ABCV34_RS08240	0.28	-4.1
1,760,054	+		ABCV34_RS08240	0.28	-2.3
1,760,055	-		ABCV34_RS08240	0.28	-0.8
1,760,055	-		ABCV34_RS08240	0.28	-1.1
1,760,055	-		ABCV34_RS08240	0.28	-1.5
1,760,055	-		ABCV34_RS08240	0.28	-1.6
1,760,055	-		ABCV34_RS08240	0.28	-1.6
1,760,055	-		ABCV34_RS08240	0.28	-1.6
1,760,056	+		ABCV34_RS08240	0.28	-3.9
1,760,056	+		ABCV34_RS08240	0.28	-0.5
1,760,056	+		ABCV34_RS08240	0.28	-1.8
1,760,056	+		ABCV34_RS08240	0.28	-0.8
1,760,056	+		ABCV34_RS08240	0.28	-1.9
1,760,056	+		ABCV34_RS08240	0.28	-2.6
1,760,056	+		ABCV34_RS08240	0.28	-2.7
1,760,056	+		ABCV34_RS08240	0.28	-2.1
1,760,056	+		ABCV34_RS08240	0.28	-1.6
1,760,056	+		ABCV34_RS08240	0.28	-1.2
1,760,056	+		ABCV34_RS08240	0.28	-1.9
1,760,056	+		ABCV34_RS08240	0.28	-0.1
1,760,057	-		ABCV34_RS08240	0.28	-1.8
1,760,057	-		ABCV34_RS08240	0.28	-2.6
1,760,057	-		ABCV34_RS08240	0.28	-1.5
1,760,057	-		ABCV34_RS08240	0.28	-2.6
1,760,057	-		ABCV34_RS08240	0.28	-0.5
1,760,057	-		ABCV34_RS08240	0.28	-0.4
1,760,057	-		ABCV34_RS08240	0.28	+1.2
1,760,057	-		ABCV34_RS08240	0.28	-2.4
1,760,057	-		ABCV34_RS08240	0.28	-1.9
1,760,057	-		ABCV34_RS08240	0.28	-3.1
1,760,584	+				-4.1
1,760,584	+				-3.7
1,760,584	+				-1.2
1,760,584	+				-2.5
1,760,584	+				-1.6
1,760,584	+				-2.4
1,760,585	-				-1.1
1,760,585	-				-1.5
1,760,585	-				-2.8
1,760,585	-				-3.5
1,760,585	-				-1.6
1,760,585	-				-2.0
1,760,585	-				-1.5
1,760,585	-				-1.5
1,760,585	-				-1.1
1,760,585	-				-2.2
1,760,639	+				-2.4
1,760,640	-				-2.6
1,760,640	-				-2.2
1,760,908	-		ABCV34_RS08245	0.30	-1.7
1,760,908	-		ABCV34_RS08245	0.30	-2.3
1,760,917	+		ABCV34_RS08245	0.31	-0.8
1,760,917	+		ABCV34_RS08245	0.31	-1.9
1,760,917	+		ABCV34_RS08245	0.31	-1.6
1,760,917	+		ABCV34_RS08245	0.31	-2.4
1,760,917	+		ABCV34_RS08245	0.31	+0.9
1,760,917	+		ABCV34_RS08245	0.31	-2.6
1,760,917	+		ABCV34_RS08245	0.31	-2.9
1,760,917	+		ABCV34_RS08245	0.31	-1.5
1,760,917	+		ABCV34_RS08245	0.31	-1.7
1,760,917	+		ABCV34_RS08245	0.31	-2.2
1,760,918	-		ABCV34_RS08245	0.31	-2.5
1,760,918	-		ABCV34_RS08245	0.31	-1.7
1,760,918	-		ABCV34_RS08245	0.31	-1.1
1,760,918	-		ABCV34_RS08245	0.31	-1.9
1,760,918	-		ABCV34_RS08245	0.31	-2.4
1,760,918	-		ABCV34_RS08245	0.31	-2.3
1,760,918	-		ABCV34_RS08245	0.31	-1.4
1,760,956	-		ABCV34_RS08245	0.35	-2.4
1,760,956	-		ABCV34_RS08245	0.35	-1.6
1,760,956	-		ABCV34_RS08245	0.35	-2.9
1,760,969	+		ABCV34_RS08245	0.36	-2.7
1,760,969	+		ABCV34_RS08245	0.36	-1.5
1,761,264	+		ABCV34_RS08245	0.62	-2.9
1,761,264	+		ABCV34_RS08245	0.62	-1.1
1,761,264	+		ABCV34_RS08245	0.62	-1.4
1,761,264	+		ABCV34_RS08245	0.62	-0.6
1,761,265	-		ABCV34_RS08245	0.62	-1.1
1,761,265	-		ABCV34_RS08245	0.62	-1.3
1,761,265	-		ABCV34_RS08245	0.62	-1.1
1,761,265	-		ABCV34_RS08245	0.62	-2.1
1,761,501	+		ABCV34_RS08245	0.83	-2.1
1,761,501	+		ABCV34_RS08245	0.83	-1.6
1,761,501	+		ABCV34_RS08245	0.83	+0.9
1,761,501	+		ABCV34_RS08245	0.83	-1.9
1,761,501	+		ABCV34_RS08245	0.83	-3.5
1,761,502	-		ABCV34_RS08245	0.83	-1.1
1,761,502	-		ABCV34_RS08245	0.83	-0.8
1,761,502	-		ABCV34_RS08245	0.83	-1.7
1,761,502	-		ABCV34_RS08245	0.83	-0.7