Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS06890

Experiment: Anaerobic; FW104 COMM 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; FW104 COMM 1 X
1,483,054	+				-1.0
1,483,054	+				-1.4
1,483,054	+				-1.7
1,483,055	-				-3.1
1,483,055	-				-2.5
1,483,057	-				-2.0
1,483,098	+				-3.3
1,483,098	+				-1.4
1,483,098	+				-2.0
1,483,098	+				-0.6
1,483,098	+				-0.5
1,483,099	-				-1.2
1,483,099	-				-2.0
1,483,123	+				-0.0
1,483,123	+				-1.8
1,483,123	+				-1.4
1,483,123	+				-2.4
1,483,124	-				-1.8
1,483,124	-				-2.0
1,483,203	+		ABCV34_RS06885	0.13	-0.9
1,483,203	+		ABCV34_RS06885	0.13	-3.4
1,483,204	-		ABCV34_RS06885	0.13	-1.0
1,483,204	-		ABCV34_RS06885	0.13	-2.1
1,483,204	-		ABCV34_RS06885	0.13	-0.4
1,483,204	-		ABCV34_RS06885	0.13	-0.5
1,483,204	-		ABCV34_RS06885	0.13	-1.2
1,483,204	-		ABCV34_RS06885	0.13	-0.9
1,483,204	-		ABCV34_RS06885	0.13	-1.8
1,483,204	-		ABCV34_RS06885	0.13	-1.4
1,483,274	-		ABCV34_RS06885	0.22	-2.2
1,483,369	-		ABCV34_RS06885	0.33	-0.4
1,483,585	+		ABCV34_RS06885	0.60	-0.9
1,483,684	-		ABCV34_RS06885	0.72	-2.9
1,484,110	+				-0.4
1,484,110	+				-1.5
1,484,111	-				-1.4
1,484,278	+		ABCV34_RS06890	0.11	-1.5
1,484,279	-		ABCV34_RS06890	0.11	-0.9
1,484,284	+		ABCV34_RS06890	0.11	+2.0
1,484,365	+		ABCV34_RS06890	0.14	-1.0
1,485,046	+		ABCV34_RS06890	0.37	-1.5
1,485,046	+		ABCV34_RS06890	0.37	-0.8
1,485,046	+		ABCV34_RS06890	0.37	-1.0
1,485,047	-		ABCV34_RS06890	0.37	-2.0
1,485,047	-		ABCV34_RS06890	0.37	-0.7
1,485,059	+		ABCV34_RS06890	0.37	-1.6
1,485,136	+		ABCV34_RS06890	0.40	-1.8
1,485,136	+		ABCV34_RS06890	0.40	-1.2
1,485,136	+		ABCV34_RS06890	0.40	-2.4
1,485,137	-		ABCV34_RS06890	0.40	-1.8
1,485,137	-		ABCV34_RS06890	0.40	-1.6
1,485,278	+		ABCV34_RS06890	0.45	-2.2
1,485,278	+		ABCV34_RS06890	0.45	-2.0
1,485,278	+		ABCV34_RS06890	0.45	-1.2
1,485,278	+		ABCV34_RS06890	0.45	-1.8
1,485,279	-		ABCV34_RS06890	0.45	-2.0
1,485,279	-		ABCV34_RS06890	0.45	-1.2
1,485,279	-		ABCV34_RS06890	0.45	-1.5
1,485,279	-		ABCV34_RS06890	0.45	-1.8
1,485,304	-		ABCV34_RS06890	0.46	+1.3
1,485,463	+		ABCV34_RS06890	0.51	-1.1
1,485,463	+		ABCV34_RS06890	0.51	-1.1
1,485,463	+		ABCV34_RS06890	0.51	-0.5
1,485,463	+		ABCV34_RS06890	0.51	-0.9
1,485,463	+		ABCV34_RS06890	0.51	-1.4
1,485,464	-		ABCV34_RS06890	0.51	-2.0
1,485,464	-		ABCV34_RS06890	0.51	-1.2
1,485,464	-		ABCV34_RS06890	0.51	-2.2
1,485,566	+		ABCV34_RS06890	0.55	-0.9
1,485,566	+		ABCV34_RS06890	0.55	-1.0
1,485,567	-		ABCV34_RS06890	0.55	-1.4
1,485,567	-		ABCV34_RS06890	0.55	-0.9
1,485,567	-		ABCV34_RS06890	0.55	-1.1
1,485,567	-		ABCV34_RS06890	0.55	-1.5
1,485,589	+		ABCV34_RS06890	0.55	-1.2
1,485,589	+		ABCV34_RS06890	0.55	-1.8
1,485,590	-		ABCV34_RS06890	0.55	-2.0
1,485,590	-		ABCV34_RS06890	0.55	-0.2
1,485,590	-		ABCV34_RS06890	0.55	-0.7
1,485,590	-		ABCV34_RS06890	0.55	-2.1
1,485,638	-		ABCV34_RS06890	0.57	-1.0
1,485,667	+		ABCV34_RS06890	0.58	-0.6
1,485,667	+		ABCV34_RS06890	0.58	-1.7
1,485,667	+		ABCV34_RS06890	0.58	-0.5
1,485,667	+		ABCV34_RS06890	0.58	-1.2
1,485,667	+		ABCV34_RS06890	0.58	-1.1
1,485,667	+		ABCV34_RS06890	0.58	-1.8
1,485,667	+		ABCV34_RS06890	0.58	-1.6
1,485,667	+		ABCV34_RS06890	0.58	-2.2
1,485,668	-		ABCV34_RS06890	0.58	-1.8
1,485,668	-		ABCV34_RS06890	0.58	-1.9
1,485,668	-		ABCV34_RS06890	0.58	-1.7
1,485,668	-		ABCV34_RS06890	0.58	-1.5
1,485,668	-		ABCV34_RS06890	0.58	-1.8
1,485,668	-		ABCV34_RS06890	0.58	-1.6
1,485,745	+		ABCV34_RS06890	0.61	-1.5
1,485,746	-		ABCV34_RS06890	0.61	-1.7
1,485,746	-		ABCV34_RS06890	0.61	-1.8
1,485,746	-		ABCV34_RS06890	0.61	-1.4
1,485,754	+		ABCV34_RS06890	0.61	-2.4
1,485,754	+		ABCV34_RS06890	0.61	-1.5
1,485,754	+		ABCV34_RS06890	0.61	-1.3
1,485,755	-		ABCV34_RS06890	0.61	-1.2
1,485,755	-		ABCV34_RS06890	0.61	-0.8
1,485,755	-		ABCV34_RS06890	0.61	-1.4
1,485,755	-		ABCV34_RS06890	0.61	-1.8
1,485,755	-		ABCV34_RS06890	0.61	-1.1
1,485,755	-		ABCV34_RS06890	0.61	-1.5
1,485,755	-		ABCV34_RS06890	0.61	-1.3
1,485,865	+		ABCV34_RS06890	0.65	-1.4
1,485,871	-		ABCV34_RS06890	0.65	-3.0
1,485,871	-		ABCV34_RS06890	0.65	-2.0
1,485,871	-		ABCV34_RS06890	0.65	-2.1
1,485,871	-		ABCV34_RS06890	0.65	-1.3
1,486,085	+		ABCV34_RS06890	0.72	-2.2
1,486,085	+		ABCV34_RS06890	0.72	-1.3
1,486,086	-		ABCV34_RS06890	0.72	-0.8
1,486,087	+		ABCV34_RS06890	0.72	-2.5
1,486,087	+		ABCV34_RS06890	0.72	+1.0
1,486,087	+		ABCV34_RS06890	0.72	-1.1
1,486,088	-		ABCV34_RS06890	0.72	-1.6
1,486,088	-		ABCV34_RS06890	0.72	-1.7
1,486,088	-		ABCV34_RS06890	0.72	-1.7
1,486,088	-		ABCV34_RS06890	0.72	-1.5
1,486,192	+		ABCV34_RS06890	0.76	-1.8
1,486,192	+		ABCV34_RS06890	0.76	-2.6
1,486,192	+		ABCV34_RS06890	0.76	-0.7
1,486,192	+		ABCV34_RS06890	0.76	-1.5
1,486,192	+		ABCV34_RS06890	0.76	-1.0
1,486,192	+		ABCV34_RS06890	0.76	-0.5
1,486,192	+		ABCV34_RS06890	0.76	-1.0
1,486,192	+		ABCV34_RS06890	0.76	-3.2
1,486,192	+		ABCV34_RS06890	0.76	-1.1
1,486,192	+		ABCV34_RS06890	0.76	-2.8
1,486,192	+		ABCV34_RS06890	0.76	-1.7
1,486,192	+		ABCV34_RS06890	0.76	-0.6
1,486,192	+		ABCV34_RS06890	0.76	-1.2
1,486,193	-		ABCV34_RS06890	0.76	-0.6
1,486,193	-		ABCV34_RS06890	0.76	-2.2
1,486,193	-		ABCV34_RS06890	0.76	-1.0
1,486,193	-		ABCV34_RS06890	0.76	-1.3
1,486,193	-		ABCV34_RS06890	0.76	-0.3
1,486,193	-		ABCV34_RS06890	0.76	-0.6
1,486,193	-		ABCV34_RS06890	0.76	-0.5
1,486,261	+		ABCV34_RS06890	0.78	-0.8
1,486,262	-		ABCV34_RS06890	0.78	-1.2
1,486,262	-		ABCV34_RS06890	0.78	-1.4
1,486,262	-		ABCV34_RS06890	0.78	+0.5
1,486,262	-		ABCV34_RS06890	0.78	-2.1
1,486,342	+		ABCV34_RS06890	0.81	-1.3
1,486,342	+		ABCV34_RS06890	0.81	-1.3
1,486,342	+		ABCV34_RS06890	0.81	-0.7
1,486,343	-		ABCV34_RS06890	0.81	-1.4
1,486,343	-		ABCV34_RS06890	0.81	-1.1
1,486,343	-		ABCV34_RS06890	0.81	-1.8
1,486,747	+				-1.0
1,486,747	+				-0.5
1,486,747	+				-1.1
1,486,747	+				-2.0
1,486,747	+				-1.0
1,486,747	+				-1.0
1,486,747	+				-1.6
1,486,747	+				+0.1
1,486,747	+				-1.0
1,486,747	+				-1.5
1,486,747	+				-1.5
1,486,747	+				-1.3
1,486,747	+				-0.9
1,486,747	+				-2.2
1,486,747	+				-2.1
1,486,748	-				-0.6
1,486,748	-				-1.2
1,486,748	-				-1.8
1,486,748	-				-1.0
1,486,748	-				-2.2
1,486,748	-				-1.8
1,486,748	-				-1.4
1,486,748	-				-2.5
1,486,748	-				-2.4
1,486,748	-				-1.6
1,486,748	-				-0.9
1,486,748	-				-1.7
1,486,748	-				-1.7
1,486,805	+				-1.8
1,486,805	+				-1.9
1,486,806	-				-0.8
1,487,477	+		ABCV34_RS06895	0.61	-2.0
1,487,478	-		ABCV34_RS06895	0.61	-0.3
1,487,478	-		ABCV34_RS06895	0.61	-0.0
1,487,478	-		ABCV34_RS06895	0.61	-0.0
1,487,478	-		ABCV34_RS06895	0.61	-1.1
1,487,478	-		ABCV34_RS06895	0.61	-1.3
1,487,478	-		ABCV34_RS06895	0.61	-1.1
1,487,569	+		ABCV34_RS06895	0.70	-1.9
1,487,569	+		ABCV34_RS06895	0.70	-1.4
1,487,570	-		ABCV34_RS06895	0.70	-1.1
1,487,570	-		ABCV34_RS06895	0.70	-1.6
1,487,570	-		ABCV34_RS06895	0.70	-1.1
1,487,570	-		ABCV34_RS06895	0.70	-2.2
1,487,570	-		ABCV34_RS06895	0.70	-1.7
1,487,570	-		ABCV34_RS06895	0.70	-0.9
1,487,788	-				-2.8