Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03479

Experiment: Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03477 and MPMX20_03478 are separated by 31 nucleotidesMPMX20_03478 and MPMX20_03479 are separated by 18 nucleotidesMPMX20_03479 and MPMX20_03480 are separated by 190 nucleotides MPMX20_03477: MPMX20_03477 - tRNA (guanine-N(1)-)-methyltransferase, at 3,667,157 to 3,667,924 _03477 MPMX20_03478: MPMX20_03478 - Ribosome maturation factor RimM, at 3,667,956 to 3,668,492 _03478 MPMX20_03479: MPMX20_03479 - 30S ribosomal protein S16, at 3,668,511 to 3,668,759 _03479 MPMX20_03480: MPMX20_03480 - Signal recognition particle protein, at 3,668,950 to 3,670,311 _03480 Position (kb) 3668 3669Strain fitness (log2 ratio) -3 -2 -1 0 1at 3668.538 kb on - strand, within MPMX20_03479at 3668.538 kb on - strand, within MPMX20_03479at 3668.538 kb on - strand, within MPMX20_03479at 3668.900 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048
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3,668,538 - MPMX20_03479 0.11 -0.7
3,668,538 - MPMX20_03479 0.11 -3.0
3,668,538 - MPMX20_03479 0.11 -2.5
3,668,900 - +0.3

Or see this region's nucleotide sequence