Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02764

Experiment: Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02762 and MPMX20_02763 are separated by 84 nucleotidesMPMX20_02763 and MPMX20_02764 are separated by 131 nucleotidesMPMX20_02764 and MPMX20_02765 overlap by 4 nucleotidesMPMX20_02765 and MPMX20_02766 are separated by 39 nucleotides MPMX20_02762: MPMX20_02762 - High-affinity zinc uptake system protein ZnuA, at 2,919,087 to 2,919,767 _02762 MPMX20_02763: MPMX20_02763 - hypothetical protein, at 2,919,852 to 2,919,977 _02763 MPMX20_02764: MPMX20_02764 - Zinc import ATP-binding protein ZnuC, at 2,920,109 to 2,920,864 _02764 MPMX20_02765: MPMX20_02765 - High-affinity zinc uptake system membrane protein ZnuB, at 2,920,861 to 2,921,646 _02765 MPMX20_02766: MPMX20_02766 - Holliday junction ATP-dependent DNA helicase RuvB, at 2,921,686 to 2,922,696 _02766 Position (kb) 2920 2921Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2919.182 kb on + strand, within MPMX20_02762at 2919.182 kb on + strand, within MPMX20_02762at 2919.182 kb on + strand, within MPMX20_02762at 2919.190 kb on - strand, within MPMX20_02762at 2919.190 kb on - strand, within MPMX20_02762at 2919.190 kb on - strand, within MPMX20_02762at 2919.190 kb on - strand, within MPMX20_02762at 2919.190 kb on - strand, within MPMX20_02762at 2919.190 kb on - strand, within MPMX20_02762at 2919.190 kb on - strand, within MPMX20_02762at 2919.238 kb on + strand, within MPMX20_02762at 2919.238 kb on + strand, within MPMX20_02762at 2919.246 kb on - strand, within MPMX20_02762at 2919.312 kb on - strand, within MPMX20_02762at 2919.324 kb on - strand, within MPMX20_02762at 2919.367 kb on - strand, within MPMX20_02762at 2919.367 kb on - strand, within MPMX20_02762at 2919.373 kb on - strand, within MPMX20_02762at 2919.442 kb on + strand, within MPMX20_02762at 2919.460 kb on - strand, within MPMX20_02762at 2919.465 kb on + strand, within MPMX20_02762at 2919.473 kb on - strand, within MPMX20_02762at 2919.571 kb on + strand, within MPMX20_02762at 2919.657 kb on + strand, within MPMX20_02762at 2919.947 kb on + strand, within MPMX20_02763at 2919.987 kb on - strandat 2919.993 kb on + strandat 2920.154 kb on - strandat 2920.154 kb on - strandat 2920.325 kb on - strand, within MPMX20_02764at 2920.428 kb on - strand, within MPMX20_02764at 2920.519 kb on - strand, within MPMX20_02764at 2920.519 kb on - strand, within MPMX20_02764at 2920.519 kb on - strand, within MPMX20_02764at 2920.521 kb on + strand, within MPMX20_02764at 2920.529 kb on - strand, within MPMX20_02764at 2920.540 kb on + strand, within MPMX20_02764at 2920.563 kb on - strand, within MPMX20_02764at 2920.565 kb on - strand, within MPMX20_02764at 2920.565 kb on - strand, within MPMX20_02764at 2920.565 kb on - strand, within MPMX20_02764at 2920.621 kb on - strand, within MPMX20_02764at 2920.623 kb on + strand, within MPMX20_02764at 2920.631 kb on - strand, within MPMX20_02764at 2920.663 kb on + strand, within MPMX20_02764at 2920.687 kb on - strand, within MPMX20_02764at 2920.707 kb on + strand, within MPMX20_02764at 2920.724 kb on - strand, within MPMX20_02764at 2920.778 kb on - strand, within MPMX20_02764at 2920.895 kb on + strandat 2920.903 kb on - strandat 2920.903 kb on - strandat 2920.982 kb on + strand, within MPMX20_02765at 2921.000 kb on + strand, within MPMX20_02765at 2921.000 kb on + strand, within MPMX20_02765at 2921.068 kb on + strand, within MPMX20_02765at 2921.078 kb on - strand, within MPMX20_02765at 2921.150 kb on + strand, within MPMX20_02765at 2921.430 kb on + strand, within MPMX20_02765at 2921.550 kb on - strand, within MPMX20_02765at 2921.593 kb on - strandat 2921.595 kb on - strandat 2921.650 kb on + strandat 2921.663 kb on - strandat 2921.675 kb on + strandat 2921.778 kb on + strandat 2921.778 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Achromobacter sp. TBS_048
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2,919,182 + MPMX20_02762 0.14 -1.1
2,919,182 + MPMX20_02762 0.14 +0.4
2,919,182 + MPMX20_02762 0.14 -1.0
2,919,190 - MPMX20_02762 0.15 +0.5
2,919,190 - MPMX20_02762 0.15 -1.2
2,919,190 - MPMX20_02762 0.15 +0.0
2,919,190 - MPMX20_02762 0.15 -0.7
2,919,190 - MPMX20_02762 0.15 +0.3
2,919,190 - MPMX20_02762 0.15 -0.0
2,919,190 - MPMX20_02762 0.15 -0.3
2,919,238 + MPMX20_02762 0.22 +0.2
2,919,238 + MPMX20_02762 0.22 -1.7
2,919,246 - MPMX20_02762 0.23 -0.7
2,919,312 - MPMX20_02762 0.33 +1.8
2,919,324 - MPMX20_02762 0.35 +0.2
2,919,367 - MPMX20_02762 0.41 -1.9
2,919,367 - MPMX20_02762 0.41 +0.5
2,919,373 - MPMX20_02762 0.42 -0.2
2,919,442 + MPMX20_02762 0.52 -1.1
2,919,460 - MPMX20_02762 0.55 +0.3
2,919,465 + MPMX20_02762 0.56 +0.4
2,919,473 - MPMX20_02762 0.57 -0.5
2,919,571 + MPMX20_02762 0.71 -0.1
2,919,657 + MPMX20_02762 0.84 +0.7
2,919,947 + MPMX20_02763 0.75 -1.2
2,919,987 - +0.6
2,919,993 + +2.8
2,920,154 - -0.4
2,920,154 - -1.4
2,920,325 - MPMX20_02764 0.29 -0.8
2,920,428 - MPMX20_02764 0.42 +1.7
2,920,519 - MPMX20_02764 0.54 -1.2
2,920,519 - MPMX20_02764 0.54 -0.1
2,920,519 - MPMX20_02764 0.54 -0.4
2,920,521 + MPMX20_02764 0.54 -0.9
2,920,529 - MPMX20_02764 0.56 +2.6
2,920,540 + MPMX20_02764 0.57 -1.0
2,920,563 - MPMX20_02764 0.60 +0.1
2,920,565 - MPMX20_02764 0.60 -1.4
2,920,565 - MPMX20_02764 0.60 +0.4
2,920,565 - MPMX20_02764 0.60 +0.9
2,920,621 - MPMX20_02764 0.68 +0.9
2,920,623 + MPMX20_02764 0.68 +0.7
2,920,631 - MPMX20_02764 0.69 -0.0
2,920,663 + MPMX20_02764 0.73 -2.8
2,920,687 - MPMX20_02764 0.76 -0.9
2,920,707 + MPMX20_02764 0.79 -0.8
2,920,724 - MPMX20_02764 0.81 -2.2
2,920,778 - MPMX20_02764 0.88 -3.0
2,920,895 + -0.2
2,920,903 - -0.1
2,920,903 - +1.1
2,920,982 + MPMX20_02765 0.15 +0.3
2,921,000 + MPMX20_02765 0.18 -1.4
2,921,000 + MPMX20_02765 0.18 +0.1
2,921,068 + MPMX20_02765 0.26 +2.3
2,921,078 - MPMX20_02765 0.28 -0.3
2,921,150 + MPMX20_02765 0.37 -1.4
2,921,430 + MPMX20_02765 0.72 -0.1
2,921,550 - MPMX20_02765 0.88 -0.7
2,921,593 - +1.0
2,921,595 - +0.5
2,921,650 + -0.1
2,921,663 - +0.8
2,921,675 + +0.0
2,921,778 + -1.3
2,921,778 + -0.5

Or see this region's nucleotide sequence