Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS14225

Experiment: Anaerobic; FW104 COMM 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; FW104 COMM 1 X
3,017,296	+		ABCV34_RS14215	0.88	-2.2
3,017,296	+		ABCV34_RS14215	0.88	-1.8
3,017,296	+		ABCV34_RS14215	0.88	-2.1
3,017,296	+		ABCV34_RS14215	0.88	-2.7
3,017,296	+		ABCV34_RS14215	0.88	-2.9
3,017,296	+		ABCV34_RS14215	0.88	-1.7
3,017,296	+		ABCV34_RS14215	0.88	-1.6
3,017,296	+		ABCV34_RS14215	0.88	-2.1
3,017,296	+		ABCV34_RS14215	0.88	-2.3
3,017,296	+		ABCV34_RS14215	0.88	-2.1
3,017,297	-		ABCV34_RS14215	0.88	-2.7
3,017,297	-		ABCV34_RS14215	0.88	-1.7
3,017,297	-		ABCV34_RS14215	0.88	-2.7
3,017,297	-		ABCV34_RS14215	0.88	-2.8
3,017,297	-		ABCV34_RS14215	0.88	-0.8
3,017,297	-		ABCV34_RS14215	0.88	-1.9
3,017,297	-		ABCV34_RS14215	0.88	-2.6
3,017,297	-		ABCV34_RS14215	0.88	-2.1
3,017,297	-		ABCV34_RS14215	0.88	-1.7
3,017,297	-		ABCV34_RS14215	0.88	-2.7
3,017,335	+		ABCV34_RS14215	0.90	-1.7
3,017,335	+		ABCV34_RS14215	0.90	-1.7
3,017,335	+		ABCV34_RS14215	0.90	-3.4
3,017,335	+		ABCV34_RS14215	0.90	-1.7
3,017,336	-		ABCV34_RS14215	0.90	-2.6
3,017,470	+				-1.7
3,017,470	+				-3.2
3,017,470	+				-1.9
3,017,470	+				-2.4
3,017,825	+		ABCV34_RS14220	0.43	-1.0
3,017,825	+		ABCV34_RS14220	0.43	-1.7
3,017,958	+		ABCV34_RS14220	0.67	-2.8
3,017,958	+		ABCV34_RS14220	0.67	-2.7
3,017,958	+		ABCV34_RS14220	0.67	-2.3
3,017,958	+		ABCV34_RS14220	0.67	-2.0
3,017,958	+		ABCV34_RS14220	0.67	-2.5
3,017,958	+		ABCV34_RS14220	0.67	-1.9
3,017,959	-		ABCV34_RS14220	0.67	-3.0
3,017,959	-		ABCV34_RS14220	0.67	-2.7
3,017,959	-		ABCV34_RS14220	0.67	-2.4
3,017,959	-		ABCV34_RS14220	0.67	-1.2
3,017,959	-		ABCV34_RS14220	0.67	-2.6
3,018,181	+				-1.3
3,018,427	+		ABCV34_RS14225	0.13	-1.5
3,018,427	+		ABCV34_RS14225	0.13	-1.4
3,018,427	+		ABCV34_RS14225	0.13	-1.6
3,018,427	+		ABCV34_RS14225	0.13	-1.4
3,018,428	-		ABCV34_RS14225	0.13	-1.5
3,018,428	-		ABCV34_RS14225	0.13	-2.8
3,018,428	-		ABCV34_RS14225	0.13	-0.1
3,018,428	-		ABCV34_RS14225	0.13	-2.4
3,018,549	+		ABCV34_RS14225	0.23	-2.7
3,018,595	+		ABCV34_RS14225	0.26	-1.9
3,018,595	+		ABCV34_RS14225	0.26	-1.9
3,018,595	+		ABCV34_RS14225	0.26	-1.4
3,018,595	+		ABCV34_RS14225	0.26	-1.5
3,018,596	-		ABCV34_RS14225	0.26	-1.7
3,018,596	-		ABCV34_RS14225	0.26	-0.4
3,018,672	+		ABCV34_RS14225	0.32	-0.5
3,018,672	+		ABCV34_RS14225	0.32	-1.0
3,019,259	+		ABCV34_RS14225	0.78	-0.1
3,019,259	+		ABCV34_RS14225	0.78	-1.7
3,019,259	+		ABCV34_RS14225	0.78	-1.7
3,019,259	+		ABCV34_RS14225	0.78	-2.6
3,019,259	+		ABCV34_RS14225	0.78	-1.2
3,019,259	+		ABCV34_RS14225	0.78	-2.3
3,019,259	+		ABCV34_RS14225	0.78	-0.7
3,019,259	+		ABCV34_RS14225	0.78	-0.7
3,019,259	+		ABCV34_RS14225	0.78	-1.2
3,019,260	-		ABCV34_RS14225	0.78	-2.5
3,019,260	-		ABCV34_RS14225	0.78	-1.1
3,019,260	-		ABCV34_RS14225	0.78	-1.8
3,019,260	-		ABCV34_RS14225	0.78	-1.3
3,019,260	-		ABCV34_RS14225	0.78	-2.9
3,019,260	-		ABCV34_RS14225	0.78	-2.0
3,019,260	-		ABCV34_RS14225	0.78	-0.8
3,019,260	-		ABCV34_RS14225	0.78	-2.4
3,019,260	-		ABCV34_RS14225	0.78	-1.3
3,019,562	+				-1.7
3,019,710	+				-2.1
3,019,710	+				-1.8
3,019,710	+				-1.1
3,019,710	+				-1.4
3,019,710	+				-2.4
3,019,711	-				-2.5
3,019,711	-				-1.1
3,019,725	-				-2.1
3,019,856	+				-3.0
3,019,856	+				-2.4
3,019,857	-				-2.7
3,019,857	-				-1.1
3,019,858	+				-2.4
3,019,858	+				-0.1
3,019,858	+				-0.7
3,019,858	+				-2.2
3,019,858	+				-1.1
3,019,859	-				-1.1
3,019,859	-				-2.3
3,019,859	-				-1.7
3,019,859	-				-1.3
3,019,859	-				-1.3
3,019,875	-				-1.7
3,019,875	-				-0.7
3,019,875	-				-1.9
3,020,066	+		ABCV34_RS14230	0.23	-1.1
3,020,066	+		ABCV34_RS14230	0.23	-2.3
3,020,066	+		ABCV34_RS14230	0.23	-3.8
3,020,066	+		ABCV34_RS14230	0.23	-2.8
3,020,127	-		ABCV34_RS14230	0.28	-2.6
3,020,127	-		ABCV34_RS14230	0.28	-3.4
3,020,174	+		ABCV34_RS14230	0.31	-2.5
3,020,174	+		ABCV34_RS14230	0.31	-0.1
3,020,174	+		ABCV34_RS14230	0.31	-2.7
3,020,175	-		ABCV34_RS14230	0.31	-1.5
3,020,180	+		ABCV34_RS14230	0.32	-1.7
3,020,180	+		ABCV34_RS14230	0.32	-1.9
3,020,181	-		ABCV34_RS14230	0.32	-2.9
3,020,181	-		ABCV34_RS14230	0.32	-1.8
3,020,325	+		ABCV34_RS14230	0.43	-2.1
3,020,326	-		ABCV34_RS14230	0.43	-2.2
3,020,349	-		ABCV34_RS14230	0.45	-3.6
3,020,366	+		ABCV34_RS14230	0.46	-2.6
3,020,462	+		ABCV34_RS14230	0.53	-2.4
3,020,462	+		ABCV34_RS14230	0.53	-2.9
3,020,462	+		ABCV34_RS14230	0.53	-1.1
3,020,462	+		ABCV34_RS14230	0.53	-3.1
3,020,462	+		ABCV34_RS14230	0.53	-2.4
3,020,462	+		ABCV34_RS14230	0.53	-1.5
3,020,462	+		ABCV34_RS14230	0.53	-2.4
3,020,462	+		ABCV34_RS14230	0.53	-1.8
3,020,462	+		ABCV34_RS14230	0.53	-2.9
3,020,462	+		ABCV34_RS14230	0.53	-2.3
3,020,463	-		ABCV34_RS14230	0.53	-2.7
3,020,463	-		ABCV34_RS14230	0.53	-1.5
3,020,463	-		ABCV34_RS14230	0.53	-1.3
3,020,463	-		ABCV34_RS14230	0.53	-1.1
3,020,469	-		ABCV34_RS14230	0.54	-3.4
3,020,469	-		ABCV34_RS14230	0.54	-2.1
3,020,529	-		ABCV34_RS14230	0.58	+0.2