Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS10425

Experiment: Anaerobic; FW104 COMM 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; FW104 COMM 1 X
2,228,310	+				-1.2
2,228,310	+				-0.9
2,228,310	+				-1.8
2,228,310	+				-2.0
2,228,311	-				-2.8
2,228,335	+				-1.8
2,228,335	+				-1.7
2,228,335	+				-2.1
2,228,335	+				-0.5
2,228,335	+				-2.5
2,228,335	+				-2.5
2,228,335	+				-0.6
2,228,335	+				-1.8
2,228,336	-				-0.1
2,228,336	-				+0.9
2,228,336	-				-1.9
2,228,336	-				-0.5
2,228,336	-				-1.8
2,228,357	+				-1.3
2,228,358	-				-1.3
2,228,367	+				-0.4
2,228,367	+				-1.4
2,228,367	+				-1.4
2,228,367	+				+0.4
2,228,367	+				-2.2
2,228,367	+				-1.1
2,228,367	+				+0.2
2,228,367	+				-1.2
2,228,368	-				-0.6
2,228,368	-				-1.1
2,228,368	-				-2.0
2,228,368	-				-1.4
2,228,368	-				+0.2
2,228,368	-				-3.4
2,228,368	-				-2.0
2,228,368	-				-1.2
2,228,387	+				-1.6
2,228,397	+				-1.5
2,228,397	+				-0.4
2,228,397	+				-1.8
2,228,397	+				-1.6
2,228,398	-				-1.9
2,228,398	-				-2.2
2,228,398	-				-2.1
2,228,398	-				-1.0
2,228,398	-				-1.6
2,228,400	+				-2.3
2,228,400	+				-1.9
2,228,400	+				+0.3
2,228,400	+				-0.8
2,228,400	+				-0.1
2,228,400	+				-2.2
2,228,400	+				-1.5
2,228,401	-				-1.3
2,228,401	-				-1.3
2,228,401	-				-1.1
2,228,401	-				-2.6
2,228,401	-				-2.6
2,228,401	-				-1.4
2,228,401	-				-1.8
2,228,401	-				-1.6
2,228,401	-				-2.4
2,228,401	-				-2.1
2,228,401	-				-1.7
2,228,401	-				-1.4
2,228,473	+		ABCV34_RS10420	0.12	-1.7
2,228,473	+		ABCV34_RS10420	0.12	-1.2
2,228,474	-		ABCV34_RS10420	0.12	-1.5
2,228,474	-		ABCV34_RS10420	0.12	-2.1
2,228,474	-		ABCV34_RS10420	0.12	-1.6
2,228,545	+		ABCV34_RS10420	0.20	-0.7
2,228,587	+		ABCV34_RS10420	0.24	-1.3
2,228,588	-		ABCV34_RS10420	0.25	-3.1
2,228,636	-		ABCV34_RS10420	0.30	-0.7
2,228,636	-		ABCV34_RS10420	0.30	-1.5
2,228,671	+		ABCV34_RS10420	0.34	-1.2
2,228,671	+		ABCV34_RS10420	0.34	-1.8
2,228,671	+		ABCV34_RS10420	0.34	-1.9
2,228,671	+		ABCV34_RS10420	0.34	-1.4
2,228,672	-		ABCV34_RS10420	0.34	-0.9
2,228,672	-		ABCV34_RS10420	0.34	-1.9
2,228,672	-		ABCV34_RS10420	0.34	-2.2
2,228,672	-		ABCV34_RS10420	0.34	-0.7
2,228,683	+		ABCV34_RS10420	0.35	-2.2
2,228,683	+		ABCV34_RS10420	0.35	-1.5
2,228,683	+		ABCV34_RS10420	0.35	-2.2
2,228,683	+		ABCV34_RS10420	0.35	-1.0
2,228,684	-		ABCV34_RS10420	0.35	-2.3
2,228,684	-		ABCV34_RS10420	0.35	-1.2
2,228,684	-		ABCV34_RS10420	0.35	-1.7
2,228,831	-		ABCV34_RS10420	0.52	-1.9
2,228,994	+		ABCV34_RS10420	0.71	-2.6
2,229,038	-		ABCV34_RS10420	0.76	-2.2
2,229,038	-		ABCV34_RS10420	0.76	-0.1
2,229,044	+		ABCV34_RS10420	0.76	-2.0
2,229,044	+		ABCV34_RS10420	0.76	-1.9
2,229,044	+		ABCV34_RS10420	0.76	-1.6
2,229,045	-		ABCV34_RS10420	0.76	-1.1
2,229,045	-		ABCV34_RS10420	0.76	-1.8
2,229,045	-		ABCV34_RS10420	0.76	-0.9
2,229,045	-		ABCV34_RS10420	0.76	-1.0
2,229,045	-		ABCV34_RS10420	0.76	-1.3
2,229,045	-		ABCV34_RS10420	0.76	-1.9
2,229,045	-		ABCV34_RS10420	0.76	-2.3
2,229,127	-		ABCV34_RS10420	0.86	-0.4
2,229,139	+		ABCV34_RS10420	0.87	-3.3
2,229,139	+		ABCV34_RS10420	0.87	-2.1
2,229,139	+		ABCV34_RS10420	0.87	-1.6
2,229,139	+		ABCV34_RS10420	0.87	-1.4
2,229,140	-		ABCV34_RS10420	0.87	-0.6
2,229,178	+				-0.5
2,229,178	+				-0.9
2,229,178	+				-0.6
2,229,178	+				-1.4
2,229,178	+				-0.9
2,229,178	+				-1.9
2,229,178	+				-1.3
2,229,179	-				-1.8
2,229,180	+				-2.2
2,229,250	+				-0.7
2,229,250	+				-0.1
2,229,250	+				-1.0
2,229,381	+		ABCV34_RS10425	0.11	-2.0
2,229,381	+		ABCV34_RS10425	0.11	-4.2
2,229,381	+		ABCV34_RS10425	0.11	-0.6
2,229,382	-		ABCV34_RS10425	0.11	-1.7
2,229,382	-		ABCV34_RS10425	0.11	-1.3
2,229,382	-		ABCV34_RS10425	0.11	-2.5
2,229,402	+		ABCV34_RS10425	0.14	-1.8
2,229,402	+		ABCV34_RS10425	0.14	+0.5
2,229,402	+		ABCV34_RS10425	0.14	-1.0
2,229,402	+		ABCV34_RS10425	0.14	-0.6
2,229,402	+		ABCV34_RS10425	0.14	-2.0
2,229,403	-		ABCV34_RS10425	0.14	-1.5
2,229,435	+		ABCV34_RS10425	0.18	-1.8
2,229,435	+		ABCV34_RS10425	0.18	-0.7
2,229,436	-		ABCV34_RS10425	0.19	-1.6
2,229,439	+		ABCV34_RS10425	0.19	-2.1
2,229,439	+		ABCV34_RS10425	0.19	-0.1
2,229,439	+		ABCV34_RS10425	0.19	-1.0
2,229,439	+		ABCV34_RS10425	0.19	-1.3
2,229,439	+		ABCV34_RS10425	0.19	-1.1
2,229,439	+		ABCV34_RS10425	0.19	-1.3
2,229,439	+		ABCV34_RS10425	0.19	+0.2
2,229,439	+		ABCV34_RS10425	0.19	-1.8
2,229,439	+		ABCV34_RS10425	0.19	-1.7
2,229,439	+		ABCV34_RS10425	0.19	-1.3
2,229,439	+		ABCV34_RS10425	0.19	-0.5
2,229,439	+		ABCV34_RS10425	0.19	-1.7
2,229,439	+		ABCV34_RS10425	0.19	-3.9
2,229,439	+		ABCV34_RS10425	0.19	-2.0
2,229,439	+		ABCV34_RS10425	0.19	-1.9
2,229,439	+		ABCV34_RS10425	0.19	-1.5
2,229,440	-		ABCV34_RS10425	0.19	-0.1
2,229,440	-		ABCV34_RS10425	0.19	-1.4
2,229,440	-		ABCV34_RS10425	0.19	-2.0
2,229,440	-		ABCV34_RS10425	0.19	-1.1
2,229,440	-		ABCV34_RS10425	0.19	-1.9
2,229,440	-		ABCV34_RS10425	0.19	-1.5
2,229,440	-		ABCV34_RS10425	0.19	-0.8
2,229,440	-		ABCV34_RS10425	0.19	-1.4
2,229,440	-		ABCV34_RS10425	0.19	-1.0
2,229,440	-		ABCV34_RS10425	0.19	-0.9
2,229,440	-		ABCV34_RS10425	0.19	-1.7
2,229,440	-		ABCV34_RS10425	0.19	-1.1
2,229,440	-		ABCV34_RS10425	0.19	-1.0
2,230,185	+		ABCV34_RS10430	0.67	-1.2
2,230,185	+		ABCV34_RS10430	0.67	-1.9
2,230,185	+		ABCV34_RS10430	0.67	-1.6
2,230,185	+		ABCV34_RS10430	0.67	-1.1
2,230,185	+		ABCV34_RS10430	0.67	-0.4
2,230,266	+				-1.7
2,230,266	+				-1.8
2,230,267	-				-2.0
2,230,360	-				-1.3
2,230,360	-				-2.2