Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS09390

Experiment: Anaerobic; FW104 COMM 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; FW104 COMM 1 X
2,009,262	+		ABCV34_RS09385	0.44	-1.0
2,009,262	+		ABCV34_RS09385	0.44	-1.8
2,009,262	+		ABCV34_RS09385	0.44	-2.1
2,009,262	+		ABCV34_RS09385	0.44	-1.2
2,009,262	+		ABCV34_RS09385	0.44	-1.3
2,009,262	+		ABCV34_RS09385	0.44	-0.6
2,009,263	-		ABCV34_RS09385	0.44	-0.6
2,009,263	-		ABCV34_RS09385	0.44	-1.5
2,009,263	-		ABCV34_RS09385	0.44	-2.4
2,009,263	-		ABCV34_RS09385	0.44	-2.7
2,009,263	-		ABCV34_RS09385	0.44	-1.1
2,009,263	-		ABCV34_RS09385	0.44	-1.0
2,009,263	-		ABCV34_RS09385	0.44	-1.9
2,009,263	-		ABCV34_RS09385	0.44	-0.1
2,009,334	+		ABCV34_RS09385	0.53	-2.0
2,009,334	+		ABCV34_RS09385	0.53	-2.2
2,009,334	+		ABCV34_RS09385	0.53	-1.7
2,009,334	+		ABCV34_RS09385	0.53	-1.7
2,009,334	+		ABCV34_RS09385	0.53	-2.9
2,009,334	+		ABCV34_RS09385	0.53	-2.2
2,009,335	-		ABCV34_RS09385	0.53	-1.9
2,009,335	-		ABCV34_RS09385	0.53	-2.3
2,009,335	-		ABCV34_RS09385	0.53	-2.2
2,009,336	+		ABCV34_RS09385	0.53	-2.1
2,009,337	-		ABCV34_RS09385	0.53	-2.1
2,009,337	-		ABCV34_RS09385	0.53	-0.1
2,009,532	+		ABCV34_RS09385	0.78	-1.3
2,009,532	+		ABCV34_RS09385	0.78	-1.3
2,009,532	+		ABCV34_RS09385	0.78	-1.5
2,009,532	+		ABCV34_RS09385	0.78	-1.2
2,009,532	+		ABCV34_RS09385	0.78	-0.1
2,009,532	+		ABCV34_RS09385	0.78	-1.8
2,009,532	+		ABCV34_RS09385	0.78	-1.1
2,009,532	+		ABCV34_RS09385	0.78	-1.6
2,009,532	+		ABCV34_RS09385	0.78	-1.8
2,009,532	+		ABCV34_RS09385	0.78	-1.4
2,009,532	+		ABCV34_RS09385	0.78	-1.9
2,009,532	+		ABCV34_RS09385	0.78	-1.6
2,009,532	+		ABCV34_RS09385	0.78	-2.3
2,009,532	+		ABCV34_RS09385	0.78	-1.9
2,009,532	+		ABCV34_RS09385	0.78	-2.7
2,009,532	+		ABCV34_RS09385	0.78	-2.9
2,009,532	+		ABCV34_RS09385	0.78	-1.4
2,009,532	+		ABCV34_RS09385	0.78	-2.4
2,009,532	+		ABCV34_RS09385	0.78	-0.8
2,009,532	+		ABCV34_RS09385	0.78	-1.5
2,009,532	+		ABCV34_RS09385	0.78	-2.0
2,009,532	+		ABCV34_RS09385	0.78	-3.1
2,009,532	+		ABCV34_RS09385	0.78	-1.6
2,009,532	+		ABCV34_RS09385	0.78	-0.8
2,009,532	+		ABCV34_RS09385	0.78	-2.2
2,009,532	+		ABCV34_RS09385	0.78	-1.7
2,009,532	+		ABCV34_RS09385	0.78	-1.8
2,009,532	+		ABCV34_RS09385	0.78	-1.8
2,009,532	+		ABCV34_RS09385	0.78	-2.1
2,009,532	+		ABCV34_RS09385	0.78	-1.6
2,009,532	+		ABCV34_RS09385	0.78	-2.5
2,009,532	+		ABCV34_RS09385	0.78	-1.6
2,009,532	+		ABCV34_RS09385	0.78	-2.3
2,009,532	+		ABCV34_RS09385	0.78	+0.5
2,009,533	-		ABCV34_RS09385	0.78	-0.7
2,009,533	-		ABCV34_RS09385	0.78	-1.9
2,009,533	-		ABCV34_RS09385	0.78	-1.7
2,009,533	-		ABCV34_RS09385	0.78	-1.7
2,009,533	-		ABCV34_RS09385	0.78	-1.7
2,009,533	-		ABCV34_RS09385	0.78	-0.8
2,009,533	-		ABCV34_RS09385	0.78	-1.1
2,009,533	-		ABCV34_RS09385	0.78	-1.7
2,009,533	-		ABCV34_RS09385	0.78	-2.7
2,009,533	-		ABCV34_RS09385	0.78	-0.7
2,009,533	-		ABCV34_RS09385	0.78	-2.4
2,009,533	-		ABCV34_RS09385	0.78	-2.9
2,009,533	-		ABCV34_RS09385	0.78	-1.8
2,009,533	-		ABCV34_RS09385	0.78	-2.4
2,009,533	-		ABCV34_RS09385	0.78	-1.6
2,009,533	-		ABCV34_RS09385	0.78	-2.4
2,009,533	-		ABCV34_RS09385	0.78	-3.1
2,009,533	-		ABCV34_RS09385	0.78	-1.4
2,009,533	-		ABCV34_RS09385	0.78	-1.1
2,009,533	-		ABCV34_RS09385	0.78	-1.4
2,009,533	-		ABCV34_RS09385	0.78	-1.3
2,009,533	-		ABCV34_RS09385	0.78	+0.9
2,009,533	-		ABCV34_RS09385	0.78	-0.5
2,009,533	-		ABCV34_RS09385	0.78	-0.7
2,009,533	-		ABCV34_RS09385	0.78	-1.1
2,009,533	-		ABCV34_RS09385	0.78	-1.5
2,009,538	+		ABCV34_RS09385	0.79	-1.7
2,009,539	-		ABCV34_RS09385	0.79	+0.9
2,009,704	-				-1.9
2,009,704	-				+0.3
2,009,704	-				-2.1
2,009,737	-				-1.7
2,009,737	-				-0.1
2,009,737	-				-2.1
2,009,865	+				-0.1
2,009,866	-				-4.1
2,009,868	-				-2.2
2,009,923	+				-3.0
2,010,642	+				-0.9
2,010,643	-				-2.4
2,010,756	+		ABCV34_RS09395	0.17	-0.1
2,010,756	+		ABCV34_RS09395	0.17	-0.9
2,010,757	-		ABCV34_RS09395	0.17	-1.7
2,010,757	-		ABCV34_RS09395	0.17	-0.4
2,010,757	-		ABCV34_RS09395	0.17	-1.4
2,010,757	-		ABCV34_RS09395	0.17	-0.1
2,010,757	-		ABCV34_RS09395	0.17	-0.3
2,010,757	-		ABCV34_RS09395	0.17	+0.0
2,010,757	-		ABCV34_RS09395	0.17	-2.4
2,010,763	+		ABCV34_RS09395	0.18	-1.2
2,010,763	+		ABCV34_RS09395	0.18	-0.2
2,010,763	+		ABCV34_RS09395	0.18	-2.4
2,010,764	-		ABCV34_RS09395	0.18	-0.1
2,010,764	-		ABCV34_RS09395	0.18	-1.1
2,010,764	-		ABCV34_RS09395	0.18	-1.0
2,010,764	-		ABCV34_RS09395	0.18	-0.3
2,010,764	-		ABCV34_RS09395	0.18	-1.3
2,010,764	-		ABCV34_RS09395	0.18	-0.8
2,010,764	-		ABCV34_RS09395	0.18	-1.8
2,010,789	+		ABCV34_RS09395	0.21	-0.4
2,010,789	+		ABCV34_RS09395	0.21	+1.1
2,010,789	+		ABCV34_RS09395	0.21	+0.9
2,010,790	-		ABCV34_RS09395	0.22	-1.9
2,010,790	-		ABCV34_RS09395	0.22	-0.8
2,010,909	+		ABCV34_RS09395	0.39	-1.5
2,010,909	+		ABCV34_RS09395	0.39	-0.4
2,010,909	+		ABCV34_RS09395	0.39	-0.6
2,010,909	+		ABCV34_RS09395	0.39	-0.9
2,010,909	+		ABCV34_RS09395	0.39	-0.9
2,010,910	-		ABCV34_RS09395	0.39	-0.4
2,010,910	-		ABCV34_RS09395	0.39	-1.1
2,010,910	-		ABCV34_RS09395	0.39	-0.7
2,011,023	+		ABCV34_RS09395	0.55	-0.9
2,011,023	+		ABCV34_RS09395	0.55	+0.9
2,011,023	+		ABCV34_RS09395	0.55	-0.1
2,011,023	+		ABCV34_RS09395	0.55	-2.4
2,011,023	+		ABCV34_RS09395	0.55	-0.3
2,011,023	+		ABCV34_RS09395	0.55	-0.8
2,011,023	+		ABCV34_RS09395	0.55	-1.5
2,011,023	+		ABCV34_RS09395	0.55	-0.6
2,011,023	+		ABCV34_RS09395	0.55	-1.3
2,011,023	+		ABCV34_RS09395	0.55	-0.4
2,011,024	-		ABCV34_RS09395	0.56	-0.6
2,011,024	-		ABCV34_RS09395	0.56	-0.8
2,011,024	-		ABCV34_RS09395	0.56	-2.1
2,011,024	-		ABCV34_RS09395	0.56	-1.1
2,011,024	-		ABCV34_RS09395	0.56	-1.4
2,011,024	-		ABCV34_RS09395	0.56	-3.2
2,011,024	-		ABCV34_RS09395	0.56	-1.8
2,011,024	-		ABCV34_RS09395	0.56	-2.6
2,011,178	+		ABCV34_RS09395	0.78	-2.2
2,011,222	+		ABCV34_RS09395	0.84	-2.1
2,011,223	-		ABCV34_RS09395	0.84	-0.9
2,011,223	-		ABCV34_RS09395	0.84	-1.1
2,011,223	-		ABCV34_RS09395	0.84	-0.8
2,011,223	-		ABCV34_RS09395	0.84	-1.1
2,011,223	-		ABCV34_RS09395	0.84	-0.7
2,011,223	-		ABCV34_RS09395	0.84	-0.1
2,011,223	-		ABCV34_RS09395	0.84	-0.6
2,011,223	-		ABCV34_RS09395	0.84	-0.3
2,011,223	-		ABCV34_RS09395	0.84	+1.0
2,011,223	-		ABCV34_RS09395	0.84	-1.4
2,011,223	-		ABCV34_RS09395	0.84	-1.1
2,011,223	-		ABCV34_RS09395	0.84	-2.5
2,011,223	-		ABCV34_RS09395	0.84	-1.2
2,011,223	-		ABCV34_RS09395	0.84	-0.9
2,011,223	-		ABCV34_RS09395	0.84	+0.4
2,011,223	-		ABCV34_RS09395	0.84	-2.1
2,011,223	-		ABCV34_RS09395	0.84	+0.5
2,011,223	-		ABCV34_RS09395	0.84	-0.7