Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS10835

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
2,390,771	+				-0.3
2,390,771	+				+0.3
2,390,771	+				-0.5
2,390,771	+				+0.9
2,390,771	+				-0.7
2,390,771	+				-1.6
2,390,771	+				-1.7
2,390,772	-				+2.5
2,390,772	-				-0.4
2,391,006	+		LRK55_RS10835	0.21	-1.3
2,391,006	+		LRK55_RS10835	0.21	-0.0
2,391,006	+		LRK55_RS10835	0.21	+0.5
2,391,007	-		LRK55_RS10835	0.21	-0.3
2,391,117	+		LRK55_RS10835	0.28	+0.1
2,391,117	+		LRK55_RS10835	0.28	-0.0
2,391,117	+		LRK55_RS10835	0.28	+1.0
2,391,118	-		LRK55_RS10835	0.28	+0.4
2,391,118	-		LRK55_RS10835	0.28	-0.7
2,391,118	-		LRK55_RS10835	0.28	-0.8
2,391,118	-		LRK55_RS10835	0.28	-0.5
2,391,189	+		LRK55_RS10835	0.33	-0.7
2,391,190	-		LRK55_RS10835	0.33	-0.9
2,391,190	-		LRK55_RS10835	0.33	-0.3
2,391,190	-		LRK55_RS10835	0.33	-2.5
2,391,281	+		LRK55_RS10835	0.39	-0.5
2,391,282	-		LRK55_RS10835	0.39	+0.5
2,391,282	-		LRK55_RS10835	0.39	-0.4
2,391,282	-		LRK55_RS10835	0.39	-0.4
2,391,282	-		LRK55_RS10835	0.39	-0.0
2,391,472	-		LRK55_RS10835	0.51	-2.3
2,391,546	+		LRK55_RS10835	0.55	-0.5
2,391,595	+		LRK55_RS10835	0.58	-1.8
2,391,596	-		LRK55_RS10835	0.59	-0.2
2,391,738	+		LRK55_RS10835	0.68	+0.2
2,391,739	-		LRK55_RS10835	0.68	-0.0
2,391,866	+		LRK55_RS10835	0.76	-0.6
2,391,866	+		LRK55_RS10835	0.76	-0.3
2,391,866	+		LRK55_RS10835	0.76	-0.1
2,391,867	-		LRK55_RS10835	0.76	-1.9
2,391,867	-		LRK55_RS10835	0.76	-0.4
2,391,897	+		LRK55_RS10835	0.78	-0.6
2,391,898	-		LRK55_RS10835	0.78	+0.2
2,391,898	-		LRK55_RS10835	0.78	-0.1
2,391,898	-		LRK55_RS10835	0.78	-0.8
2,391,898	-		LRK55_RS10835	0.78	-0.0
2,391,898	-		LRK55_RS10835	0.78	-2.7
2,391,898	-		LRK55_RS10835	0.78	-0.3
2,391,898	-		LRK55_RS10835	0.78	+0.5
2,391,898	-		LRK55_RS10835	0.78	-0.6
2,391,898	-		LRK55_RS10835	0.78	-0.0
2,391,898	-		LRK55_RS10835	0.78	+0.0
2,391,964	-		LRK55_RS10835	0.82	+0.3
2,392,005	+		LRK55_RS10835	0.84	+1.4
2,392,005	+		LRK55_RS10835	0.84	-0.1
2,392,005	+		LRK55_RS10835	0.84	+0.5
2,392,005	+		LRK55_RS10835	0.84	-1.1
2,392,005	+		LRK55_RS10835	0.84	+0.3
2,392,005	+		LRK55_RS10835	0.84	+0.0
2,392,005	+		LRK55_RS10835	0.84	+0.7
2,392,005	+		LRK55_RS10835	0.84	+0.3
2,392,005	+		LRK55_RS10835	0.84	+1.7
2,392,005	+		LRK55_RS10835	0.84	+0.7
2,392,005	+		LRK55_RS10835	0.84	-1.1
2,392,006	-		LRK55_RS10835	0.85	-1.1
2,392,006	-		LRK55_RS10835	0.85	-0.2
2,392,006	-		LRK55_RS10835	0.85	-0.1
2,392,006	-		LRK55_RS10835	0.85	-1.4
2,392,006	-		LRK55_RS10835	0.85	+0.5
2,392,006	-		LRK55_RS10835	0.85	-0.1
2,392,006	-		LRK55_RS10835	0.85	-0.6
2,392,006	-		LRK55_RS10835	0.85	-0.5
2,392,006	-		LRK55_RS10835	0.85	+0.1
2,392,006	-		LRK55_RS10835	0.85	+1.1
2,392,269	+				+0.8
2,392,295	+				+0.6
2,392,295	+				+0.1
2,392,296	-				+0.7
2,392,298	+				+0.8
2,392,298	+				+0.3
2,392,298	+				+0.4
2,392,298	+				-0.1
2,392,298	+				+0.7
2,392,298	+				+0.9
2,392,298	+				-1.8
2,392,298	+				+0.3
2,392,298	+				-0.1
2,392,298	+				-1.3
2,392,298	+				-0.5
2,392,298	+				+0.3
2,392,298	+				+0.7
2,392,298	+				+0.6
2,392,299	-				-0.6
2,392,299	-				-0.5
2,392,299	-				+0.0
2,392,299	-				+0.5
2,392,299	-				+0.0
2,392,299	-				-0.1
2,392,299	-				-1.5
2,392,299	-				+0.2
2,392,299	-				-0.5
2,392,299	-				-0.3
2,392,299	-				+1.2
2,392,383	-				-1.5
2,392,465	-				-1.2
2,392,558	+		LRK55_RS10840	0.14	-1.1
2,392,558	+		LRK55_RS10840	0.14	-0.2
2,392,559	-		LRK55_RS10840	0.14	-0.1
2,392,770	+		LRK55_RS10840	0.30	+0.6
2,392,770	+		LRK55_RS10840	0.30	-0.5
2,392,770	+		LRK55_RS10840	0.30	+0.1
2,392,771	-		LRK55_RS10840	0.30	+0.8
2,392,771	-		LRK55_RS10840	0.30	-0.3
2,392,771	-		LRK55_RS10840	0.30	-0.8
2,392,857	+		LRK55_RS10840	0.37	+0.2
2,392,857	+		LRK55_RS10840	0.37	+1.2
2,392,857	+		LRK55_RS10840	0.37	-0.6
2,392,857	+		LRK55_RS10840	0.37	+3.7
2,392,857	+		LRK55_RS10840	0.37	+0.7
2,392,857	+		LRK55_RS10840	0.37	-0.0
2,392,857	+		LRK55_RS10840	0.37	-0.9
2,392,858	-		LRK55_RS10840	0.37	+1.0
2,392,858	-		LRK55_RS10840	0.37	+1.3
2,392,869	+		LRK55_RS10840	0.38	+0.7
2,392,869	+		LRK55_RS10840	0.38	-0.3
2,392,869	+		LRK55_RS10840	0.38	+0.1
2,392,869	+		LRK55_RS10840	0.38	-0.6
2,392,869	+		LRK55_RS10840	0.38	-1.6
2,392,869	+		LRK55_RS10840	0.38	+0.7
2,392,869	+		LRK55_RS10840	0.38	-0.1
2,392,869	+		LRK55_RS10840	0.38	+0.5
2,392,869	+		LRK55_RS10840	0.38	+0.1
2,392,869	+		LRK55_RS10840	0.38	+0.7
2,392,869	+		LRK55_RS10840	0.38	-0.3
2,392,869	+		LRK55_RS10840	0.38	+0.4
2,392,869	+		LRK55_RS10840	0.38	-0.1
2,392,870	-		LRK55_RS10840	0.38	-1.6
2,392,870	-		LRK55_RS10840	0.38	+0.1
2,392,870	-		LRK55_RS10840	0.38	-0.5
2,392,870	-		LRK55_RS10840	0.38	-0.6
2,392,870	-		LRK55_RS10840	0.38	+1.2
2,392,870	-		LRK55_RS10840	0.38	+1.0
2,392,870	-		LRK55_RS10840	0.38	+1.7
2,392,929	+		LRK55_RS10840	0.42	+0.8
2,392,929	+		LRK55_RS10840	0.42	-0.9
2,393,031	+		LRK55_RS10840	0.50	-0.7
2,393,031	+		LRK55_RS10840	0.50	+0.9
2,393,032	-		LRK55_RS10840	0.50	+0.1
2,393,032	-		LRK55_RS10840	0.50	+0.7
2,393,032	-		LRK55_RS10840	0.50	-0.4
2,393,032	-		LRK55_RS10840	0.50	+0.5
2,393,032	-		LRK55_RS10840	0.50	+0.7
2,393,032	-		LRK55_RS10840	0.50	+1.3
2,393,032	-		LRK55_RS10840	0.50	-0.1
2,393,032	-		LRK55_RS10840	0.50	+0.9
2,393,044	+		LRK55_RS10840	0.51	+0.6
2,393,044	+		LRK55_RS10840	0.51	-0.4
2,393,044	+		LRK55_RS10840	0.51	-0.9
2,393,044	+		LRK55_RS10840	0.51	+0.1
2,393,044	+		LRK55_RS10840	0.51	+0.4
2,393,044	+		LRK55_RS10840	0.51	+0.5
2,393,044	+		LRK55_RS10840	0.51	+0.9
2,393,044	+		LRK55_RS10840	0.51	+1.8
2,393,045	-		LRK55_RS10840	0.51	-0.2
2,393,045	-		LRK55_RS10840	0.51	+0.8
2,393,045	-		LRK55_RS10840	0.51	+0.7
2,393,045	-		LRK55_RS10840	0.51	+1.3
2,393,062	-		LRK55_RS10840	0.52	-0.1
2,393,062	-		LRK55_RS10840	0.52	+0.7
2,393,062	-		LRK55_RS10840	0.52	-1.9
2,393,244	+		LRK55_RS10840	0.66	-0.1
2,393,244	+		LRK55_RS10840	0.66	-1.4
2,393,244	+		LRK55_RS10840	0.66	+0.5
2,393,244	+		LRK55_RS10840	0.66	+0.6
2,393,244	+		LRK55_RS10840	0.66	+0.9
2,393,244	+		LRK55_RS10840	0.66	-3.2
2,393,244	+		LRK55_RS10840	0.66	-0.2
2,393,244	+		LRK55_RS10840	0.66	+0.6
2,393,244	+		LRK55_RS10840	0.66	-0.4
2,393,244	+		LRK55_RS10840	0.66	+0.3
2,393,244	+		LRK55_RS10840	0.66	-0.5
2,393,244	+		LRK55_RS10840	0.66	-0.3
2,393,244	+		LRK55_RS10840	0.66	+0.2
2,393,244	+		LRK55_RS10840	0.66	-0.1
2,393,244	+		LRK55_RS10840	0.66	+0.3
2,393,244	+		LRK55_RS10840	0.66	+0.2
2,393,245	-		LRK55_RS10840	0.66	+1.2
2,393,245	-		LRK55_RS10840	0.66	+0.7
2,393,245	-		LRK55_RS10840	0.66	-0.5
2,393,245	-		LRK55_RS10840	0.66	+0.9
2,393,245	-		LRK55_RS10840	0.66	-0.6
2,393,245	-		LRK55_RS10840	0.66	-1.3
2,393,245	-		LRK55_RS10840	0.66	+1.3
2,393,245	-		LRK55_RS10840	0.66	-0.6
2,393,245	-		LRK55_RS10840	0.66	-0.7
2,393,245	-		LRK55_RS10840	0.66	+0.7
2,393,245	-		LRK55_RS10840	0.66	+0.6
2,393,245	-		LRK55_RS10840	0.66	-0.2
2,393,245	-		LRK55_RS10840	0.66	-1.1
2,393,245	-		LRK55_RS10840	0.66	-1.6
2,393,245	-		LRK55_RS10840	0.66	+0.2
2,393,245	-		LRK55_RS10840	0.66	+0.3
2,393,245	-		LRK55_RS10840	0.66	+0.8