Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS03155 and LRK55_RS03160 are separated by 153 nucleotides LRK55_RS03160 and LRK55_RS03165 overlap by 23 nucleotides LRK55_RS03165 and LRK55_RS03170 are separated by 105 nucleotides
LRK55_RS03155: LRK55_RS03155 - ribonuclease G, at 683,952 to 685,424
_RS03155
LRK55_RS03160: LRK55_RS03160 - ATP-binding protein, at 685,578 to 686,297
_RS03160
LRK55_RS03165: LRK55_RS03165 - mismatch-specific DNA-glycosylase, at 686,275 to 686,802
_RS03165
LRK55_RS03170: LRK55_RS03170 - cytochrome c, at 686,908 to 688,197
_RS03170
Position (kb) 685
686
687 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 684.594 kb on + strand, within LRK55_RS03155 at 684.594 kb on + strand, within LRK55_RS03155 at 684.594 kb on + strand, within LRK55_RS03155 at 684.594 kb on + strand, within LRK55_RS03155 at 684.594 kb on + strand, within LRK55_RS03155 at 684.595 kb on - strand, within LRK55_RS03155 at 684.595 kb on - strand, within LRK55_RS03155 at 684.595 kb on - strand, within LRK55_RS03155 at 684.595 kb on - strand, within LRK55_RS03155 at 684.613 kb on + strand, within LRK55_RS03155 at 684.613 kb on + strand, within LRK55_RS03155 at 684.613 kb on + strand, within LRK55_RS03155 at 684.613 kb on + strand, within LRK55_RS03155 at 684.614 kb on - strand, within LRK55_RS03155 at 684.614 kb on - strand, within LRK55_RS03155 at 684.614 kb on - strand, within LRK55_RS03155 at 684.614 kb on - strand, within LRK55_RS03155 at 684.614 kb on - strand, within LRK55_RS03155 at 684.614 kb on - strand, within LRK55_RS03155 at 684.643 kb on + strand, within LRK55_RS03155 at 684.793 kb on + strand, within LRK55_RS03155 at 684.794 kb on - strand, within LRK55_RS03155 at 684.859 kb on + strand, within LRK55_RS03155 at 684.859 kb on + strand, within LRK55_RS03155 at 684.859 kb on + strand, within LRK55_RS03155 at 684.860 kb on - strand, within LRK55_RS03155 at 684.860 kb on - strand, within LRK55_RS03155 at 684.919 kb on + strand, within LRK55_RS03155 at 684.919 kb on + strand, within LRK55_RS03155 at 684.920 kb on - strand, within LRK55_RS03155 at 684.920 kb on - strand, within LRK55_RS03155 at 684.920 kb on - strand, within LRK55_RS03155 at 684.920 kb on - strand, within LRK55_RS03155 at 684.920 kb on - strand, within LRK55_RS03155 at 684.954 kb on + strand, within LRK55_RS03155 at 684.955 kb on - strand, within LRK55_RS03155 at 684.955 kb on - strand, within LRK55_RS03155 at 684.955 kb on - strand, within LRK55_RS03155 at 685.039 kb on + strand, within LRK55_RS03155 at 685.039 kb on + strand, within LRK55_RS03155 at 685.300 kb on + strand at 685.300 kb on + strand at 685.300 kb on + strand at 685.300 kb on + strand at 685.301 kb on - strand at 685.301 kb on - strand at 685.301 kb on - strand at 685.301 kb on - strand at 685.301 kb on - strand at 685.301 kb on - strand at 685.301 kb on - strand at 685.316 kb on - strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.344 kb on + strand at 685.345 kb on - strand at 685.345 kb on - strand at 685.345 kb on - strand at 685.345 kb on - strand at 685.345 kb on - strand at 685.345 kb on - strand at 685.429 kb on + strand at 685.429 kb on + strand at 685.429 kb on + strand at 685.430 kb on - strand at 685.430 kb on - strand at 685.453 kb on - strand at 685.453 kb on - strand at 685.453 kb on - strand at 685.454 kb on + strand at 685.454 kb on + strand at 685.454 kb on + strand at 685.455 kb on - strand at 685.455 kb on - strand at 685.595 kb on + strand at 685.596 kb on - strand at 685.601 kb on + strand at 685.601 kb on + strand at 685.602 kb on - strand at 685.710 kb on + strand, within LRK55_RS03160 at 685.710 kb on + strand, within LRK55_RS03160 at 685.710 kb on + strand, within LRK55_RS03160 at 685.710 kb on + strand, within LRK55_RS03160 at 685.711 kb on - strand, within LRK55_RS03160 at 685.711 kb on - strand, within LRK55_RS03160 at 685.711 kb on - strand, within LRK55_RS03160 at 685.824 kb on + strand, within LRK55_RS03160 at 685.825 kb on - strand, within LRK55_RS03160 at 685.825 kb on - strand, within LRK55_RS03160 at 685.825 kb on - strand, within LRK55_RS03160 at 685.825 kb on - strand, within LRK55_RS03160 at 686.166 kb on + strand, within LRK55_RS03160 at 686.167 kb on - strand, within LRK55_RS03160 at 686.167 kb on - strand, within LRK55_RS03160 at 686.167 kb on - strand, within LRK55_RS03160 at 686.218 kb on + strand, within LRK55_RS03160 at 686.389 kb on + strand, within LRK55_RS03165 at 686.389 kb on + strand, within LRK55_RS03165 at 686.389 kb on + strand, within LRK55_RS03165 at 686.392 kb on + strand, within LRK55_RS03165 at 686.392 kb on + strand, within LRK55_RS03165 at 686.392 kb on + strand, within LRK55_RS03165 at 686.392 kb on + strand, within LRK55_RS03165 at 686.392 kb on + strand, within LRK55_RS03165 at 686.392 kb on + strand, within LRK55_RS03165 at 686.392 kb on + strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.393 kb on - strand, within LRK55_RS03165 at 686.776 kb on + strand at 686.776 kb on + strand at 686.777 kb on - strand at 686.777 kb on - strand at 686.777 kb on - strand at 686.777 kb on - strand at 686.777 kb on - strand at 686.777 kb on - strand at 686.777 kb on - strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.800 kb on + strand at 686.801 kb on - strand at 686.801 kb on - strand at 686.801 kb on - strand at 686.801 kb on - strand at 686.858 kb on - strand at 686.858 kb on - strand at 686.891 kb on + strand at 686.891 kb on + strand at 686.931 kb on - strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.990 kb on + strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 686.991 kb on - strand at 687.161 kb on + strand, within LRK55_RS03170 at 687.219 kb on - strand, within LRK55_RS03170 at 687.228 kb on + strand, within LRK55_RS03170 at 687.229 kb on - strand, within LRK55_RS03170 at 687.229 kb on - strand, within LRK55_RS03170
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 684,594 + LRK55_RS03155 0.44 -2.0 684,594 + LRK55_RS03155 0.44 -2.0 684,594 + LRK55_RS03155 0.44 -0.5 684,594 + LRK55_RS03155 0.44 -0.4 684,594 + LRK55_RS03155 0.44 -2.2 684,595 - LRK55_RS03155 0.44 -1.0 684,595 - LRK55_RS03155 0.44 -2.9 684,595 - LRK55_RS03155 0.44 -2.0 684,595 - LRK55_RS03155 0.44 -2.1 684,613 + LRK55_RS03155 0.45 -1.6 684,613 + LRK55_RS03155 0.45 -3.7 684,613 + LRK55_RS03155 0.45 -0.4 684,613 + LRK55_RS03155 0.45 -0.9 684,614 - LRK55_RS03155 0.45 -2.2 684,614 - LRK55_RS03155 0.45 -3.1 684,614 - LRK55_RS03155 0.45 -0.2 684,614 - LRK55_RS03155 0.45 -1.7 684,614 - LRK55_RS03155 0.45 -2.9 684,614 - LRK55_RS03155 0.45 -3.2 684,643 + LRK55_RS03155 0.47 -3.4 684,793 + LRK55_RS03155 0.57 -1.3 684,794 - LRK55_RS03155 0.57 +0.6 684,859 + LRK55_RS03155 0.62 +0.6 684,859 + LRK55_RS03155 0.62 -1.6 684,859 + LRK55_RS03155 0.62 +0.3 684,860 - LRK55_RS03155 0.62 -2.0 684,860 - LRK55_RS03155 0.62 -2.6 684,919 + LRK55_RS03155 0.66 -1.2 684,919 + LRK55_RS03155 0.66 -2.6 684,920 - LRK55_RS03155 0.66 -2.2 684,920 - LRK55_RS03155 0.66 -1.7 684,920 - LRK55_RS03155 0.66 -0.1 684,920 - LRK55_RS03155 0.66 -3.4 684,920 - LRK55_RS03155 0.66 -2.0 684,954 + LRK55_RS03155 0.68 -1.7 684,955 - LRK55_RS03155 0.68 -2.5 684,955 - LRK55_RS03155 0.68 +0.2 684,955 - LRK55_RS03155 0.68 -0.5 685,039 + LRK55_RS03155 0.74 -1.3 685,039 + LRK55_RS03155 0.74 -1.5 685,300 + +1.6 685,300 + -0.4 685,300 + -1.6 685,300 + -2.4 685,301 - -3.0 685,301 - -0.7 685,301 - -0.9 685,301 - -0.0 685,301 - -1.7 685,301 - -2.5 685,301 - -2.7 685,316 - -0.7 685,344 + -2.2 685,344 + -2.1 685,344 + -2.4 685,344 + -2.2 685,344 + -2.0 685,344 + -2.7 685,344 + -2.0 685,344 + -1.4 685,344 + -2.0 685,344 + -3.5 685,344 + -0.4 685,344 + -3.0 685,344 + -1.0 685,344 + -0.0 685,345 - +1.0 685,345 - -2.2 685,345 - -0.4 685,345 - -2.2 685,345 - +1.0 685,345 - +0.6 685,429 + -1.5 685,429 + -0.7 685,429 + -1.7 685,430 - +2.8 685,430 - -2.1 685,453 - +0.3 685,453 - -3.0 685,453 - -0.2 685,454 + -0.6 685,454 + -3.0 685,454 + -0.4 685,455 - -0.9 685,455 - -1.2 685,595 + +0.2 685,596 - -0.7 685,601 + +1.0 685,601 + -0.3 685,602 - +0.8 685,710 + LRK55_RS03160 0.18 -0.7 685,710 + LRK55_RS03160 0.18 +1.0 685,710 + LRK55_RS03160 0.18 -0.7 685,710 + LRK55_RS03160 0.18 +0.2 685,711 - LRK55_RS03160 0.18 -0.6 685,711 - LRK55_RS03160 0.18 +1.5 685,711 - LRK55_RS03160 0.18 -2.1 685,824 + LRK55_RS03160 0.34 +0.6 685,825 - LRK55_RS03160 0.34 +0.6 685,825 - LRK55_RS03160 0.34 -1.7 685,825 - LRK55_RS03160 0.34 -1.0 685,825 - LRK55_RS03160 0.34 -0.7 686,166 + LRK55_RS03160 0.82 +0.3 686,167 - LRK55_RS03160 0.82 +1.6 686,167 - LRK55_RS03160 0.82 +0.6 686,167 - LRK55_RS03160 0.82 +1.1 686,218 + LRK55_RS03160 0.89 -1.3 686,389 + LRK55_RS03165 0.22 -0.4 686,389 + LRK55_RS03165 0.22 +0.5 686,389 + LRK55_RS03165 0.22 +1.6 686,392 + LRK55_RS03165 0.22 -1.0 686,392 + LRK55_RS03165 0.22 +0.1 686,392 + LRK55_RS03165 0.22 -0.6 686,392 + LRK55_RS03165 0.22 -0.6 686,392 + LRK55_RS03165 0.22 +0.3 686,392 + LRK55_RS03165 0.22 -1.5 686,392 + LRK55_RS03165 0.22 +0.9 686,393 - LRK55_RS03165 0.22 +0.0 686,393 - LRK55_RS03165 0.22 -0.1 686,393 - LRK55_RS03165 0.22 +0.9 686,393 - LRK55_RS03165 0.22 -0.4 686,393 - LRK55_RS03165 0.22 +0.9 686,393 - LRK55_RS03165 0.22 -2.2 686,393 - LRK55_RS03165 0.22 -1.4 686,393 - LRK55_RS03165 0.22 -0.3 686,393 - LRK55_RS03165 0.22 +0.4 686,393 - LRK55_RS03165 0.22 +0.3 686,393 - LRK55_RS03165 0.22 -0.6 686,776 + -1.7 686,776 + -0.4 686,777 - +2.3 686,777 - +1.0 686,777 - -1.3 686,777 - +0.5 686,777 - -0.1 686,777 - +0.2 686,777 - -0.2 686,800 + +1.3 686,800 + +1.2 686,800 + -1.6 686,800 + +0.0 686,800 + -0.0 686,800 + -0.3 686,800 + +0.4 686,800 + +0.2 686,800 + -0.0 686,801 - -2.6 686,801 - +0.6 686,801 - +0.1 686,801 - -1.4 686,858 - -0.9 686,858 - -0.1 686,891 + -0.8 686,891 + -0.0 686,931 - -0.2 686,990 + -0.1 686,990 + -1.3 686,990 + +0.7 686,990 + -0.4 686,990 + -0.2 686,990 + -0.2 686,990 + +0.5 686,990 + -0.7 686,990 + +0.6 686,990 + -0.5 686,990 + -0.3 686,990 + -0.8 686,990 + -0.4 686,990 + -1.5 686,990 + -1.1 686,990 + +0.2 686,991 - +1.2 686,991 - +0.9 686,991 - +0.1 686,991 - -0.6 686,991 - -2.5 686,991 - -1.0 686,991 - -0.2 686,991 - -0.8 686,991 - +1.6 686,991 - -0.1 686,991 - -1.0 686,991 - -1.6 686,991 - -0.0 687,161 + LRK55_RS03170 0.20 -0.6 687,219 - LRK55_RS03170 0.24 -0.7 687,228 + LRK55_RS03170 0.25 -1.0 687,229 - LRK55_RS03170 0.25 -1.1 687,229 - LRK55_RS03170 0.25 +0.4
Or see this region's nucleotide sequence