Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS07660

Experiment: Anaerobic no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic no stress control
1,640,776	+		ABCV34_RS07655	0.40	-1.6
1,640,777	-		ABCV34_RS07655	0.40	-2.8
1,640,887	+		ABCV34_RS07655	0.49	-1.2
1,640,888	-		ABCV34_RS07655	0.49	-1.4
1,641,004	-		ABCV34_RS07655	0.59	-2.3
1,641,019	+		ABCV34_RS07655	0.60	-1.8
1,641,019	+		ABCV34_RS07655	0.60	-1.6
1,641,019	+		ABCV34_RS07655	0.60	-1.1
1,641,019	+		ABCV34_RS07655	0.60	-1.6
1,641,019	+		ABCV34_RS07655	0.60	-1.7
1,641,020	-		ABCV34_RS07655	0.60	-1.3
1,641,020	-		ABCV34_RS07655	0.60	-0.8
1,641,020	-		ABCV34_RS07655	0.60	-1.3
1,641,020	-		ABCV34_RS07655	0.60	-1.3
1,641,020	-		ABCV34_RS07655	0.60	-1.9
1,641,020	-		ABCV34_RS07655	0.60	-1.2
1,641,111	+		ABCV34_RS07655	0.68	-1.8
1,641,111	+		ABCV34_RS07655	0.68	-1.9
1,641,111	+		ABCV34_RS07655	0.68	-0.7
1,641,111	+		ABCV34_RS07655	0.68	-0.3
1,641,112	-		ABCV34_RS07655	0.68	-1.3
1,641,112	-		ABCV34_RS07655	0.68	-0.7
1,641,112	-		ABCV34_RS07655	0.68	-2.3
1,641,126	+		ABCV34_RS07655	0.69	-1.8
1,641,126	+		ABCV34_RS07655	0.69	-3.1
1,641,126	+		ABCV34_RS07655	0.69	-2.9
1,641,127	-		ABCV34_RS07655	0.69	-1.3
1,641,127	-		ABCV34_RS07655	0.69	-0.8
1,641,279	+		ABCV34_RS07655	0.82	-1.4
1,641,279	+		ABCV34_RS07655	0.82	-1.7
1,641,279	+		ABCV34_RS07655	0.82	-2.1
1,641,279	+		ABCV34_RS07655	0.82	-1.4
1,641,279	+		ABCV34_RS07655	0.82	-0.7
1,641,279	+		ABCV34_RS07655	0.82	-2.0
1,641,280	-		ABCV34_RS07655	0.82	-0.6
1,641,280	-		ABCV34_RS07655	0.82	-1.3
1,641,338	+		ABCV34_RS07655	0.86	-0.1
1,641,339	-		ABCV34_RS07655	0.87	-1.4
1,641,339	-		ABCV34_RS07655	0.87	-1.9
1,641,414	+				-1.3
1,641,414	+				-1.4
1,641,414	+				-3.5
1,641,414	+				-1.7
1,641,414	+				-2.2
1,641,415	-				-2.4
1,641,415	-				-2.1
1,641,415	-				-2.4
1,641,415	-				-1.9
1,641,415	-				-2.5
1,641,415	-				-1.8
1,641,415	-				-1.4
1,641,499	-				-2.1
1,641,517	+				-2.0
1,641,517	+				-1.6
1,641,517	+				-2.2
1,641,518	-				-0.1
1,641,518	-				-1.6
1,641,518	-				-0.1
1,641,518	-				-0.1
1,641,518	-				-2.2
1,641,518	-				-1.1
1,641,520	+				-2.6
1,641,520	+				-0.9
1,641,520	+				-1.6
1,641,520	+				-0.8
1,641,520	+				-2.4
1,641,520	+				-3.1
1,641,520	+				-2.5
1,641,521	-				-2.6
1,641,521	-				-2.4
1,641,521	-				-1.6
1,641,521	-				-1.3
1,641,529	+				-1.9
1,641,529	+				-1.5
1,641,530	-				-0.6
1,641,547	+				-1.8
1,641,547	+				-1.3
1,641,547	+				-2.6
1,641,548	-				-2.9
1,641,548	-				-1.2
1,641,601	+				-0.7
1,641,601	+				-1.2
1,641,601	+				-1.1
1,641,601	+				-2.1
1,641,601	+				-3.4
1,641,602	-				-1.5
1,641,602	-				-1.9
1,641,608	+				-1.9
1,641,608	+				-0.7
1,642,465	+		ABCV34_RS07660	0.31	-1.6
1,642,465	+		ABCV34_RS07660	0.31	-2.6
1,642,465	+		ABCV34_RS07660	0.31	-1.4
1,642,465	+		ABCV34_RS07660	0.31	-1.5
1,642,465	+		ABCV34_RS07660	0.31	-0.8
1,642,466	-		ABCV34_RS07660	0.31	-0.4
1,642,466	-		ABCV34_RS07660	0.31	-1.8
1,642,719	+		ABCV34_RS07660	0.42	-3.0
1,642,720	-		ABCV34_RS07660	0.42	-0.6
1,642,720	-		ABCV34_RS07660	0.42	-1.8
1,642,720	-		ABCV34_RS07660	0.42	-2.7
1,642,830	+		ABCV34_RS07660	0.47	-2.0
1,642,831	-		ABCV34_RS07660	0.47	-0.9
1,642,846	+		ABCV34_RS07660	0.48	-2.3
1,642,846	+		ABCV34_RS07660	0.48	-2.0
1,642,846	+		ABCV34_RS07660	0.48	-2.4
1,642,846	+		ABCV34_RS07660	0.48	-3.8
1,642,846	+		ABCV34_RS07660	0.48	-1.9
1,642,846	+		ABCV34_RS07660	0.48	-1.9
1,642,846	+		ABCV34_RS07660	0.48	-0.9
1,642,846	+		ABCV34_RS07660	0.48	-1.6
1,642,846	+		ABCV34_RS07660	0.48	-3.1
1,642,846	+		ABCV34_RS07660	0.48	-0.9
1,642,847	-		ABCV34_RS07660	0.48	-1.8
1,642,847	-		ABCV34_RS07660	0.48	-2.3
1,642,847	-		ABCV34_RS07660	0.48	-1.1
1,642,847	-		ABCV34_RS07660	0.48	-0.4
1,642,847	-		ABCV34_RS07660	0.48	-2.6
1,642,847	-		ABCV34_RS07660	0.48	-1.5
1,642,847	-		ABCV34_RS07660	0.48	-1.1
1,642,847	-		ABCV34_RS07660	0.48	-1.8
1,642,847	-		ABCV34_RS07660	0.48	-1.8
1,642,847	-		ABCV34_RS07660	0.48	-1.4
1,642,847	-		ABCV34_RS07660	0.48	-2.1
1,642,847	-		ABCV34_RS07660	0.48	-1.5
1,642,847	-		ABCV34_RS07660	0.48	-0.1
1,642,847	-		ABCV34_RS07660	0.48	-0.8
1,643,331	+		ABCV34_RS07660	0.69	-1.9
1,643,331	+		ABCV34_RS07660	0.69	-1.6
1,643,331	+		ABCV34_RS07660	0.69	-2.0
1,643,331	+		ABCV34_RS07660	0.69	-1.9
1,643,332	-		ABCV34_RS07660	0.69	-1.1
1,643,367	+		ABCV34_RS07660	0.71	-1.9
1,643,367	+		ABCV34_RS07660	0.71	-3.1
1,643,367	+		ABCV34_RS07660	0.71	-1.8
1,643,367	+		ABCV34_RS07660	0.71	-2.6
1,643,367	+		ABCV34_RS07660	0.71	+0.4
1,643,368	-		ABCV34_RS07660	0.71	-2.2
1,643,368	-		ABCV34_RS07660	0.71	-1.3
1,643,368	-		ABCV34_RS07660	0.71	-0.8
1,643,368	-		ABCV34_RS07660	0.71	-1.1
1,643,368	-		ABCV34_RS07660	0.71	-2.1
1,643,368	-		ABCV34_RS07660	0.71	-0.6
1,643,368	-		ABCV34_RS07660	0.71	-1.2
1,643,368	-		ABCV34_RS07660	0.71	-1.7
1,643,368	-		ABCV34_RS07660	0.71	-0.9
1,643,368	-		ABCV34_RS07660	0.71	-0.1
1,643,460	+		ABCV34_RS07660	0.75	-0.3
1,643,460	+		ABCV34_RS07660	0.75	-1.1
1,643,460	+		ABCV34_RS07660	0.75	-2.2
1,643,460	+		ABCV34_RS07660	0.75	-2.1
1,643,460	+		ABCV34_RS07660	0.75	-1.9
1,643,460	+		ABCV34_RS07660	0.75	-1.3
1,643,460	+		ABCV34_RS07660	0.75	-2.1
1,643,461	-		ABCV34_RS07660	0.75	-2.0
1,643,461	-		ABCV34_RS07660	0.75	-1.8
1,643,461	-		ABCV34_RS07660	0.75	-0.9
1,643,461	-		ABCV34_RS07660	0.75	-1.4
1,643,461	-		ABCV34_RS07660	0.75	-1.2
1,643,461	-		ABCV34_RS07660	0.75	-0.1
1,643,461	-		ABCV34_RS07660	0.75	-1.5
1,643,547	+		ABCV34_RS07660	0.79	-0.9
1,643,627	+		ABCV34_RS07660	0.82	-2.2
1,643,706	+		ABCV34_RS07660	0.85	-2.0
1,643,706	+		ABCV34_RS07660	0.85	-2.2
1,643,706	+		ABCV34_RS07660	0.85	-1.8
1,643,707	-		ABCV34_RS07660	0.86	-1.1
1,643,832	+				-1.6
1,643,833	-				-1.2
1,643,833	-				-2.6
1,643,833	-				-1.8
1,643,833	-				-1.2
1,643,886	-				-1.5
1,643,886	-				-1.0
1,643,935	+				-1.8
1,643,935	+				-0.6
1,643,935	+				-1.1
1,643,936	-				-0.9
1,643,936	-				-2.3
1,643,936	-				-0.6
1,643,964	+				-1.9
1,644,042	+				-1.0
1,644,042	+				-2.9
1,644,042	+				-1.2
1,644,042	+				-1.5
1,644,042	+				-1.0
1,644,042	+				-1.8
1,644,042	+				-2.1
1,644,042	+				-2.4
1,644,043	-				-3.5
1,644,043	-				-1.8
1,644,043	-				-3.0
1,644,043	-				-3.2
1,644,043	-				-1.7
1,644,043	-				-0.8
1,644,043	-				-1.3
1,644,043	-				-0.1
1,644,043	-				-0.3
1,644,043	-				-1.4
1,644,043	-				-1.7
1,644,097	+				-1.4
1,644,097	+				-2.4
1,644,097	+				-1.9
1,644,097	+				-2.4
1,644,097	+				-1.6
1,644,097	+				-2.1
1,644,097	+				-1.2
1,644,097	+				-2.5
1,644,097	+				-2.7
1,644,098	-				-1.6
1,644,098	-				-1.1
1,644,098	-				-2.4
1,644,098	-				-4.3
1,644,098	-				-2.4
1,644,218	+		ABCV34_RS07665	0.30	-1.5
1,644,218	+		ABCV34_RS07665	0.30	-2.9
1,644,219	-		ABCV34_RS07665	0.31	-1.9
1,644,219	-		ABCV34_RS07665	0.31	-2.2
1,644,219	-		ABCV34_RS07665	0.31	-1.7
1,644,249	-		ABCV34_RS07665	0.40	-1.4
1,644,336	+		ABCV34_RS07665	0.67	-2.6
1,644,336	+		ABCV34_RS07665	0.67	-1.0
1,644,336	+		ABCV34_RS07665	0.67	-2.6
1,644,336	+		ABCV34_RS07665	0.67	-2.4
1,644,336	+		ABCV34_RS07665	0.67	-2.8
1,644,337	-		ABCV34_RS07665	0.67	-2.0
1,644,337	-		ABCV34_RS07665	0.67	-1.6
1,644,337	-		ABCV34_RS07665	0.67	-1.7
1,644,337	-		ABCV34_RS07665	0.67	-1.8
1,644,337	-		ABCV34_RS07665	0.67	-0.9
1,644,337	-		ABCV34_RS07665	0.67	-0.9
1,644,337	-		ABCV34_RS07665	0.67	-1.8
1,644,338	+		ABCV34_RS07665	0.68	-1.3
1,644,338	+		ABCV34_RS07665	0.68	-2.5
1,644,338	+		ABCV34_RS07665	0.68	-1.9
1,644,338	+		ABCV34_RS07665	0.68	-0.9
1,644,339	-		ABCV34_RS07665	0.68	-1.3
1,644,339	-		ABCV34_RS07665	0.68	-2.2
1,644,339	-		ABCV34_RS07665	0.68	-0.6
1,644,339	-		ABCV34_RS07665	0.68	-1.6
1,644,339	-		ABCV34_RS07665	0.68	-1.5
1,644,339	-		ABCV34_RS07665	0.68	-2.4
1,644,378	-		ABCV34_RS07665	0.80	-1.2
1,644,383	+		ABCV34_RS07665	0.82	-0.1
1,644,383	+		ABCV34_RS07665	0.82	-1.1
1,644,383	+		ABCV34_RS07665	0.82	-3.1
1,644,383	+		ABCV34_RS07665	0.82	-1.9
1,644,383	+		ABCV34_RS07665	0.82	-1.6
1,644,383	+		ABCV34_RS07665	0.82	-1.1
1,644,383	+		ABCV34_RS07665	0.82	-1.1
1,644,384	-		ABCV34_RS07665	0.82	-2.8
1,644,384	-		ABCV34_RS07665	0.82	-3.2
1,644,384	-		ABCV34_RS07665	0.82	-2.6
1,644,384	-		ABCV34_RS07665	0.82	-2.0
1,644,384	-		ABCV34_RS07665	0.82	-1.6
1,644,430	+				-1.9
1,644,430	+				-1.9
1,644,431	-				-2.1
1,644,431	-				-0.7
1,644,492	+		ABCV34_RS07670	0.18	-1.1
1,644,492	+		ABCV34_RS07670	0.18	-1.6
1,644,492	+		ABCV34_RS07670	0.18	-1.1
1,644,492	+		ABCV34_RS07670	0.18	-1.5
1,644,493	-		ABCV34_RS07670	0.18	-0.1
1,644,513	+		ABCV34_RS07670	0.26	-1.1
1,644,593	+		ABCV34_RS07670	0.56	-3.8
1,644,593	+		ABCV34_RS07670	0.56	-1.4
1,644,593	+		ABCV34_RS07670	0.56	-3.5
1,644,594	-		ABCV34_RS07670	0.57	-3.2
1,644,594	-		ABCV34_RS07670	0.57	-1.6
1,644,597	+		ABCV34_RS07670	0.58	-2.3
1,644,597	+		ABCV34_RS07670	0.58	-0.1
1,644,597	+		ABCV34_RS07670	0.58	-2.6
1,644,700	+				-1.6
1,644,700	+				-2.7
1,644,700	+				-2.9
1,644,736	+				-3.6
1,644,737	-				-1.8
1,644,738	+				-2.1
1,644,739	-				-1.6
1,644,743	-				-2.4
1,644,752	+				-0.4
1,644,788	+				-0.9
1,644,788	+				-1.5
1,644,788	+				-3.1
1,644,788	+				-1.6
1,644,788	+				-1.3
1,644,788	+				-2.1
1,644,788	+				-2.8
1,644,788	+				-1.9
1,644,789	-				-1.7
1,644,789	-				-1.5
1,644,789	-				-2.4
1,644,789	-				-1.3
1,644,789	-				-2.4
1,644,789	-				-1.9
1,644,830	+		ABCV34_RS07675	0.21	+0.4
1,644,830	+		ABCV34_RS07675	0.21	-1.1
1,644,830	+		ABCV34_RS07675	0.21	-1.9
1,644,831	-		ABCV34_RS07675	0.22	-0.5
1,644,831	-		ABCV34_RS07675	0.22	-1.4
1,644,831	-		ABCV34_RS07675	0.22	-1.6
1,644,834	-		ABCV34_RS07675	0.23	-0.7
1,644,905	+		ABCV34_RS07675	0.67	-2.6
1,644,906	-		ABCV34_RS07675	0.68	-2.6
1,644,948	+				-1.8
1,644,995	+				-1.6
1,644,995	+				-1.0
1,644,995	+				-1.1
1,644,995	+				-1.6
1,644,995	+				-2.4
1,644,995	+				-1.6
1,644,996	-				-1.1
1,644,996	-				-1.8
1,644,996	-				-0.9