Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS16595

Experiment: R2A_PIPES with Aluminum chloride 0.140625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Aluminum chloride 0.140625 mM
3,603,718	+				-0.2
3,603,719	-				-0.6
3,603,719	-				-1.2
3,603,719	-				+4.0
3,603,784	+				-1.3
3,603,784	+				+0.2
3,603,785	-				+2.8
3,603,785	-				-1.7
3,603,785	-				-0.1
3,603,785	-				+0.4
3,603,819	+				+0.7
3,603,861	+				+0.0
3,603,861	+				-0.4
3,603,861	+				-1.4
3,603,861	+				+0.2
3,603,861	+				-0.1
3,603,861	+				-0.8
3,603,861	+				+0.5
3,603,861	+				+0.7
3,603,861	+				+0.1
3,603,861	+				-0.5
3,603,861	+				-0.5
3,603,861	+				-0.3
3,603,861	+				+0.0
3,603,861	+				-0.5
3,603,861	+				+0.8
3,603,861	+				+1.1
3,603,861	+				+0.0
3,603,861	+				-0.8
3,603,861	+				-1.7
3,603,861	+				-0.5
3,603,861	+				-1.9
3,603,861	+				-0.6
3,603,861	+				-0.3
3,603,861	+				-1.5
3,603,862	-				-2.3
3,603,862	-				-0.4
3,603,862	-				-0.2
3,603,862	-				+1.4
3,603,862	-				-0.5
3,603,862	-				-2.2
3,603,862	-				+0.5
3,603,862	-				-1.4
3,603,862	-				-0.2
3,603,862	-				+0.7
3,603,862	-				+0.8
3,603,862	-				-1.9
3,603,862	-				-0.7
3,603,862	-				+0.6
3,603,862	-				-1.2
3,603,862	-				+0.9
3,603,862	-				-0.7
3,604,030	+		LRK55_RS16590	0.21	+1.1
3,604,030	+		LRK55_RS16590	0.21	-1.9
3,604,030	+		LRK55_RS16590	0.21	+1.2
3,604,030	+		LRK55_RS16590	0.21	+0.1
3,604,030	+		LRK55_RS16590	0.21	-0.2
3,604,030	+		LRK55_RS16590	0.21	+0.1
3,604,030	+		LRK55_RS16590	0.21	-0.9
3,604,030	+		LRK55_RS16590	0.21	+1.4
3,604,030	+		LRK55_RS16590	0.21	-0.3
3,604,030	+		LRK55_RS16590	0.21	-1.4
3,604,030	+		LRK55_RS16590	0.21	+0.3
3,604,030	+		LRK55_RS16590	0.21	+0.1
3,604,030	+		LRK55_RS16590	0.21	-0.3
3,604,030	+		LRK55_RS16590	0.21	+1.2
3,604,030	+		LRK55_RS16590	0.21	+1.3
3,604,030	+		LRK55_RS16590	0.21	-0.2
3,604,031	-		LRK55_RS16590	0.21	-2.7
3,604,031	-		LRK55_RS16590	0.21	-2.7
3,604,031	-		LRK55_RS16590	0.21	-0.2
3,604,031	-		LRK55_RS16590	0.21	-1.4
3,604,031	-		LRK55_RS16590	0.21	-0.6
3,604,031	-		LRK55_RS16590	0.21	-0.7
3,604,031	-		LRK55_RS16590	0.21	-2.2
3,604,031	-		LRK55_RS16590	0.21	+0.6
3,604,031	-		LRK55_RS16590	0.21	+0.3
3,604,031	-		LRK55_RS16590	0.21	+0.8
3,604,222	+		LRK55_RS16590	0.44	-2.3
3,604,222	+		LRK55_RS16590	0.44	+0.3
3,604,222	+		LRK55_RS16590	0.44	-0.4
3,604,222	+		LRK55_RS16590	0.44	+1.1
3,604,222	+		LRK55_RS16590	0.44	+0.2
3,604,222	+		LRK55_RS16590	0.44	-0.4
3,604,222	+		LRK55_RS16590	0.44	+1.6
3,604,222	+		LRK55_RS16590	0.44	-0.6
3,604,222	+		LRK55_RS16590	0.44	-0.9
3,604,222	+		LRK55_RS16590	0.44	+0.6
3,604,222	+		LRK55_RS16590	0.44	-0.2
3,604,222	+		LRK55_RS16590	0.44	+1.0
3,604,222	+		LRK55_RS16590	0.44	-1.3
3,604,223	-		LRK55_RS16590	0.44	-1.2
3,604,223	-		LRK55_RS16590	0.44	+0.3
3,604,223	-		LRK55_RS16590	0.44	-1.2
3,604,223	-		LRK55_RS16590	0.44	+0.7
3,604,223	-		LRK55_RS16590	0.44	-0.9
3,604,223	-		LRK55_RS16590	0.44	-1.2
3,604,223	-		LRK55_RS16590	0.44	-0.7
3,604,249	+		LRK55_RS16590	0.47	-0.6
3,604,249	+		LRK55_RS16590	0.47	-0.4
3,604,249	+		LRK55_RS16590	0.47	-0.1
3,604,249	+		LRK55_RS16590	0.47	+0.3
3,604,249	+		LRK55_RS16590	0.47	+0.1
3,604,249	+		LRK55_RS16590	0.47	-0.4
3,604,249	+		LRK55_RS16590	0.47	-1.4
3,604,249	+		LRK55_RS16590	0.47	+0.7
3,604,249	+		LRK55_RS16590	0.47	-0.1
3,604,249	+		LRK55_RS16590	0.47	+0.0
3,604,249	+		LRK55_RS16590	0.47	+2.0
3,604,249	+		LRK55_RS16590	0.47	-2.0
3,604,249	+		LRK55_RS16590	0.47	-1.7
3,604,249	+		LRK55_RS16590	0.47	-0.8
3,604,249	+		LRK55_RS16590	0.47	+1.1
3,604,249	+		LRK55_RS16590	0.47	-1.9
3,604,249	+		LRK55_RS16590	0.47	-2.3
3,604,249	+		LRK55_RS16590	0.47	+1.4
3,604,249	+		LRK55_RS16590	0.47	-0.3
3,604,249	+		LRK55_RS16590	0.47	-1.5
3,604,249	+		LRK55_RS16590	0.47	+0.0
3,604,249	+		LRK55_RS16590	0.47	-2.3
3,604,249	+		LRK55_RS16590	0.47	-0.4
3,604,249	+		LRK55_RS16590	0.47	-0.4
3,604,249	+		LRK55_RS16590	0.47	+0.7
3,604,250	-		LRK55_RS16590	0.48	+0.3
3,604,250	-		LRK55_RS16590	0.48	-0.4
3,604,250	-		LRK55_RS16590	0.48	+0.7
3,604,250	-		LRK55_RS16590	0.48	-0.3
3,604,250	-		LRK55_RS16590	0.48	+3.0
3,604,250	-		LRK55_RS16590	0.48	-0.5
3,604,250	-		LRK55_RS16590	0.48	+0.1
3,604,250	-		LRK55_RS16590	0.48	-0.5
3,604,250	-		LRK55_RS16590	0.48	-1.5
3,604,250	-		LRK55_RS16590	0.48	-1.7
3,604,250	-		LRK55_RS16590	0.48	+0.2
3,604,250	-		LRK55_RS16590	0.48	+0.7
3,604,250	-		LRK55_RS16590	0.48	-1.6
3,604,285	+		LRK55_RS16590	0.52	-0.7
3,604,285	+		LRK55_RS16590	0.52	-1.0
3,604,285	+		LRK55_RS16590	0.52	+0.1
3,604,285	+		LRK55_RS16590	0.52	-0.7
3,604,285	+		LRK55_RS16590	0.52	-0.6
3,604,285	+		LRK55_RS16590	0.52	-0.5
3,604,285	+		LRK55_RS16590	0.52	+0.2
3,604,286	-		LRK55_RS16590	0.52	-0.3
3,604,286	-		LRK55_RS16590	0.52	-1.7
3,604,286	-		LRK55_RS16590	0.52	-0.5
3,604,286	-		LRK55_RS16590	0.52	+0.2
3,604,286	-		LRK55_RS16590	0.52	-0.4
3,604,286	-		LRK55_RS16590	0.52	-1.4
3,604,286	-		LRK55_RS16590	0.52	-1.5
3,604,286	-		LRK55_RS16590	0.52	-0.3
3,604,316	+		LRK55_RS16590	0.56	-0.2
3,604,316	+		LRK55_RS16590	0.56	+0.9
3,604,348	+		LRK55_RS16590	0.60	+0.3
3,604,348	+		LRK55_RS16590	0.60	+1.1
3,604,348	+		LRK55_RS16590	0.60	-0.3
3,604,348	+		LRK55_RS16590	0.60	-0.9
3,604,348	+		LRK55_RS16590	0.60	-1.4
3,604,348	+		LRK55_RS16590	0.60	+0.1
3,604,348	+		LRK55_RS16590	0.60	-0.5
3,604,348	+		LRK55_RS16590	0.60	+1.4
3,604,349	-		LRK55_RS16590	0.60	+0.4
3,604,349	-		LRK55_RS16590	0.60	-2.0
3,604,349	-		LRK55_RS16590	0.60	-2.2
3,604,349	-		LRK55_RS16590	0.60	-0.7
3,604,349	-		LRK55_RS16590	0.60	+1.0
3,604,349	-		LRK55_RS16590	0.60	-2.2
3,604,349	-		LRK55_RS16590	0.60	-1.6
3,604,349	-		LRK55_RS16590	0.60	-0.2
3,604,349	-		LRK55_RS16590	0.60	-1.2
3,604,363	+		LRK55_RS16590	0.61	-0.0
3,604,364	-		LRK55_RS16590	0.62	-1.0
3,604,364	-		LRK55_RS16590	0.62	-3.2
3,604,370	+		LRK55_RS16590	0.62	+0.8
3,604,370	+		LRK55_RS16590	0.62	+0.8
3,604,371	-		LRK55_RS16590	0.62	+0.6
3,604,371	-		LRK55_RS16590	0.62	-0.7
3,604,385	-		LRK55_RS16590	0.64	+1.0
3,604,456	+		LRK55_RS16590	0.73	-0.7
3,604,456	+		LRK55_RS16590	0.73	-0.1
3,604,456	+		LRK55_RS16590	0.73	-0.9
3,604,456	+		LRK55_RS16590	0.73	+0.4
3,604,456	+		LRK55_RS16590	0.73	+0.4
3,604,457	-		LRK55_RS16590	0.73	-0.3
3,604,457	-		LRK55_RS16590	0.73	-2.2
3,604,457	-		LRK55_RS16590	0.73	-0.3
3,604,457	-		LRK55_RS16590	0.73	-1.2
3,604,457	-		LRK55_RS16590	0.73	+0.1
3,604,457	-		LRK55_RS16590	0.73	-0.1
3,604,457	-		LRK55_RS16590	0.73	-1.6
3,604,457	-		LRK55_RS16590	0.73	+1.1
3,604,457	-		LRK55_RS16590	0.73	-1.4
3,604,457	-		LRK55_RS16590	0.73	-0.1
3,604,457	-		LRK55_RS16590	0.73	+0.3
3,604,457	-		LRK55_RS16590	0.73	-0.6
3,604,457	-		LRK55_RS16590	0.73	-0.3
3,604,522	+		LRK55_RS16590	0.81	-1.4
3,604,522	+		LRK55_RS16590	0.81	+1.7
3,604,706	+				+2.6
3,604,707	-				-0.2
3,604,762	+		LRK55_RS16595	0.13	+0.0
3,604,762	+		LRK55_RS16595	0.13	+0.1
3,604,762	+		LRK55_RS16595	0.13	-1.4
3,604,762	+		LRK55_RS16595	0.13	+0.5
3,604,762	+		LRK55_RS16595	0.13	-0.3
3,604,762	+		LRK55_RS16595	0.13	-0.3
3,604,762	+		LRK55_RS16595	0.13	+1.8
3,604,762	+		LRK55_RS16595	0.13	+0.6
3,604,763	-		LRK55_RS16595	0.14	+1.7
3,604,763	-		LRK55_RS16595	0.14	+0.3
3,604,774	+		LRK55_RS16595	0.16	+1.4
3,604,774	+		LRK55_RS16595	0.16	-0.3
3,604,774	+		LRK55_RS16595	0.16	-0.2
3,604,775	-		LRK55_RS16595	0.16	+0.4
3,604,775	-		LRK55_RS16595	0.16	+1.8
3,604,825	+		LRK55_RS16595	0.26	+0.4
3,604,825	+		LRK55_RS16595	0.26	-1.3
3,604,826	-		LRK55_RS16595	0.27	-0.2
3,604,826	-		LRK55_RS16595	0.27	+1.6
3,604,826	-		LRK55_RS16595	0.27	-0.9
3,604,826	-		LRK55_RS16595	0.27	-0.3
3,604,826	-		LRK55_RS16595	0.27	-1.2
3,604,826	-		LRK55_RS16595	0.27	-0.1
3,604,826	-		LRK55_RS16595	0.27	-0.5
3,604,885	+		LRK55_RS16595	0.39	-1.0
3,604,885	+		LRK55_RS16595	0.39	-0.6
3,604,885	+		LRK55_RS16595	0.39	-0.2
3,604,885	+		LRK55_RS16595	0.39	-0.9
3,604,885	+		LRK55_RS16595	0.39	+1.1
3,604,886	-		LRK55_RS16595	0.39	-0.6
3,604,886	-		LRK55_RS16595	0.39	-0.3
3,604,886	-		LRK55_RS16595	0.39	+0.1
3,604,909	+		LRK55_RS16595	0.44	+1.4
3,604,909	+		LRK55_RS16595	0.44	+2.7
3,604,909	+		LRK55_RS16595	0.44	+1.0
3,604,910	-		LRK55_RS16595	0.44	+0.2
3,604,910	-		LRK55_RS16595	0.44	-1.3
3,604,910	-		LRK55_RS16595	0.44	-1.8
3,604,910	-		LRK55_RS16595	0.44	+0.1
3,604,910	-		LRK55_RS16595	0.44	+0.1
3,604,910	-		LRK55_RS16595	0.44	-0.2
3,604,966	+		LRK55_RS16595	0.55	-1.4
3,604,966	+		LRK55_RS16595	0.55	-0.4
3,604,966	+		LRK55_RS16595	0.55	-0.7
3,604,966	+		LRK55_RS16595	0.55	+1.4
3,604,966	+		LRK55_RS16595	0.55	+0.2
3,604,966	+		LRK55_RS16595	0.55	+1.4
3,604,966	+		LRK55_RS16595	0.55	-0.1
3,604,966	+		LRK55_RS16595	0.55	+0.2
3,604,966	+		LRK55_RS16595	0.55	-0.2
3,604,966	+		LRK55_RS16595	0.55	-1.4
3,604,966	+		LRK55_RS16595	0.55	-1.1
3,604,966	+		LRK55_RS16595	0.55	-1.3
3,604,966	+		LRK55_RS16595	0.55	-3.5
3,604,966	+		LRK55_RS16595	0.55	+1.6
3,604,966	+		LRK55_RS16595	0.55	+0.7
3,604,966	+		LRK55_RS16595	0.55	+1.1
3,604,966	+		LRK55_RS16595	0.55	-0.7
3,604,966	+		LRK55_RS16595	0.55	+0.4
3,604,966	+		LRK55_RS16595	0.55	-0.3
3,604,966	+		LRK55_RS16595	0.55	-0.7
3,604,966	+		LRK55_RS16595	0.55	+0.2
3,604,966	+		LRK55_RS16595	0.55	+0.0
3,604,966	+		LRK55_RS16595	0.55	-0.4
3,604,966	+		LRK55_RS16595	0.55	-0.5
3,604,966	+		LRK55_RS16595	0.55	+0.1
3,604,966	+		LRK55_RS16595	0.55	+0.3
3,604,966	+		LRK55_RS16595	0.55	-1.2
3,604,966	+		LRK55_RS16595	0.55	-0.8
3,604,966	+		LRK55_RS16595	0.55	+2.2
3,604,967	-		LRK55_RS16595	0.55	+1.0
3,604,967	-		LRK55_RS16595	0.55	-0.2
3,604,967	-		LRK55_RS16595	0.55	+0.9
3,604,967	-		LRK55_RS16595	0.55	-0.2
3,604,967	-		LRK55_RS16595	0.55	+0.7
3,604,967	-		LRK55_RS16595	0.55	+0.1
3,604,967	-		LRK55_RS16595	0.55	+0.0
3,604,967	-		LRK55_RS16595	0.55	+0.1
3,604,967	-		LRK55_RS16595	0.55	-0.9
3,604,967	-		LRK55_RS16595	0.55	+1.7
3,604,967	-		LRK55_RS16595	0.55	-0.1
3,604,967	-		LRK55_RS16595	0.55	+0.1
3,604,967	-		LRK55_RS16595	0.55	-0.1
3,604,967	-		LRK55_RS16595	0.55	-0.0
3,604,967	-		LRK55_RS16595	0.55	+0.8
3,604,967	-		LRK55_RS16595	0.55	+0.3
3,604,967	-		LRK55_RS16595	0.55	-1.1
3,604,967	-		LRK55_RS16595	0.55	-1.5
3,604,967	-		LRK55_RS16595	0.55	+0.3
3,604,967	-		LRK55_RS16595	0.55	-0.8
3,604,967	-		LRK55_RS16595	0.55	+0.4
3,604,967	-		LRK55_RS16595	0.55	+0.2
3,604,967	-		LRK55_RS16595	0.55	-1.7
3,604,967	-		LRK55_RS16595	0.55	-1.4
3,604,967	-		LRK55_RS16595	0.55	-1.5
3,604,967	-		LRK55_RS16595	0.55	-2.7
3,604,967	-		LRK55_RS16595	0.55	-2.3
3,604,967	-		LRK55_RS16595	0.55	-0.8
3,604,967	-		LRK55_RS16595	0.55	+0.7
3,604,967	-		LRK55_RS16595	0.55	+0.4
3,604,967	-		LRK55_RS16595	0.55	-0.4
3,604,967	-		LRK55_RS16595	0.55	-3.0
3,604,967	-		LRK55_RS16595	0.55	+0.1
3,604,967	-		LRK55_RS16595	0.55	+0.8
3,604,968	+		LRK55_RS16595	0.56	+0.3
3,604,968	+		LRK55_RS16595	0.56	+1.1
3,604,968	+		LRK55_RS16595	0.56	+0.9
3,604,968	+		LRK55_RS16595	0.56	-0.1
3,604,969	-		LRK55_RS16595	0.56	+0.4
3,604,969	-		LRK55_RS16595	0.56	-0.1
3,604,969	-		LRK55_RS16595	0.56	+1.0
3,604,969	-		LRK55_RS16595	0.56	+0.2
3,604,969	-		LRK55_RS16595	0.56	-1.3
3,605,107	+		LRK55_RS16595	0.84	-1.4
3,605,107	+		LRK55_RS16595	0.84	-0.7
3,605,107	+		LRK55_RS16595	0.84	-0.6
3,605,107	+		LRK55_RS16595	0.84	+0.4
3,605,107	+		LRK55_RS16595	0.84	+0.9
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