Experiment: R2A_PIPES with Aluminum chloride 0.140625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS02820 and LRK55_RS02825 are separated by 1 nucleotides LRK55_RS02825 and LRK55_RS02830 are separated by 74 nucleotides LRK55_RS02830 and LRK55_RS02835 are separated by 153 nucleotides
LRK55_RS02820: LRK55_RS02820 - 2-dehydropantoate 2-reductase, at 609,862 to 610,782
_RS02820
LRK55_RS02825: LRK55_RS02825 - acyltransferase, at 610,784 to 611,698
_RS02825
LRK55_RS02830: LRK55_RS02830 - cysteine desulfurase, at 611,773 to 613,017
_RS02830
LRK55_RS02835: LRK55_RS02835 - Fe-S cluster assembly protein SufD, at 613,171 to 614,490
_RS02835
Position (kb) 611
612
613
614 Strain fitness (log2 ratio) -1
0
1
2 at 610.776 kb on + strand at 610.776 kb on + strand at 610.776 kb on + strand at 610.777 kb on - strand at 610.777 kb on - strand at 610.777 kb on - strand at 610.777 kb on - strand at 610.905 kb on + strand, within LRK55_RS02825 at 610.905 kb on + strand, within LRK55_RS02825 at 610.905 kb on + strand, within LRK55_RS02825 at 610.906 kb on - strand, within LRK55_RS02825 at 611.347 kb on - strand, within LRK55_RS02825 at 611.433 kb on + strand, within LRK55_RS02825 at 611.433 kb on + strand, within LRK55_RS02825 at 611.433 kb on + strand, within LRK55_RS02825 at 611.433 kb on + strand, within LRK55_RS02825 at 611.434 kb on - strand, within LRK55_RS02825 at 611.434 kb on - strand, within LRK55_RS02825 at 611.434 kb on - strand, within LRK55_RS02825 at 611.434 kb on - strand, within LRK55_RS02825 at 611.635 kb on + strand at 611.731 kb on + strand at 611.731 kb on + strand at 611.732 kb on - strand at 611.732 kb on - strand at 611.732 kb on - strand at 613.125 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.140625 mM remove 610,776 + -0.1 610,776 + -0.9 610,776 + +0.2 610,777 - -1.0 610,777 - +1.2 610,777 - +0.2 610,777 - +0.8 610,905 + LRK55_RS02825 0.13 +0.4 610,905 + LRK55_RS02825 0.13 +1.8 610,905 + LRK55_RS02825 0.13 -0.3 610,906 - LRK55_RS02825 0.13 -0.1 611,347 - LRK55_RS02825 0.62 +0.3 611,433 + LRK55_RS02825 0.71 +0.6 611,433 + LRK55_RS02825 0.71 -0.7 611,433 + LRK55_RS02825 0.71 +0.3 611,433 + LRK55_RS02825 0.71 +0.7 611,434 - LRK55_RS02825 0.71 +0.7 611,434 - LRK55_RS02825 0.71 +0.5 611,434 - LRK55_RS02825 0.71 +0.7 611,434 - LRK55_RS02825 0.71 +1.0 611,635 + -1.0 611,731 + -0.0 611,731 + -0.3 611,732 - -1.3 611,732 - -1.4 611,732 - -1.5 613,125 + -0.3
Or see this region's nucleotide sequence