Experiment: R2A_PIPES with Aluminum chloride 0.140625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS01495 and LRK55_RS01500 are separated by 41 nucleotides LRK55_RS01500 and LRK55_RS01505 are separated by 154 nucleotides
LRK55_RS01495: LRK55_RS01495 - aspartate-semialdehyde dehydrogenase, at 320,513 to 321,544
_RS01495
LRK55_RS01500: LRK55_RS01500 - hydroxyacid dehydrogenase, at 321,586 to 321,801
_RS01500
LRK55_RS01505: LRK55_RS01505 - chorismate synthase, at 321,956 to 323,044
_RS01505
Position (kb) 321
322 Strain fitness (log2 ratio) -2
-1
0
1 at 321.717 kb on + strand, within LRK55_RS01500 at 321.718 kb on - strand, within LRK55_RS01500 at 322.378 kb on - strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.470 kb on + strand, within LRK55_RS01505 at 322.471 kb on - strand, within LRK55_RS01505 at 322.471 kb on - strand, within LRK55_RS01505 at 322.471 kb on - strand, within LRK55_RS01505 at 322.471 kb on - strand, within LRK55_RS01505 at 322.471 kb on - strand, within LRK55_RS01505 at 322.701 kb on + strand, within LRK55_RS01505 at 322.701 kb on + strand, within LRK55_RS01505 at 322.701 kb on + strand, within LRK55_RS01505 at 322.702 kb on - strand, within LRK55_RS01505 at 322.702 kb on - strand, within LRK55_RS01505 at 322.713 kb on + strand, within LRK55_RS01505 at 322.713 kb on + strand, within LRK55_RS01505 at 322.713 kb on + strand, within LRK55_RS01505 at 322.713 kb on + strand, within LRK55_RS01505 at 322.714 kb on - strand, within LRK55_RS01505 at 322.714 kb on - strand, within LRK55_RS01505 at 322.714 kb on - strand, within LRK55_RS01505 at 322.714 kb on - strand, within LRK55_RS01505 at 322.720 kb on - strand, within LRK55_RS01505 at 322.720 kb on - strand, within LRK55_RS01505 at 322.761 kb on + strand, within LRK55_RS01505 at 322.761 kb on + strand, within LRK55_RS01505 at 322.762 kb on - strand, within LRK55_RS01505
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.140625 mM remove 321,717 + LRK55_RS01500 0.61 -0.8 321,718 - LRK55_RS01500 0.61 -0.4 322,378 - LRK55_RS01505 0.39 -1.0 322,470 + LRK55_RS01505 0.47 -1.7 322,470 + LRK55_RS01505 0.47 -1.0 322,470 + LRK55_RS01505 0.47 -1.7 322,470 + LRK55_RS01505 0.47 -1.7 322,470 + LRK55_RS01505 0.47 -2.4 322,470 + LRK55_RS01505 0.47 -1.0 322,470 + LRK55_RS01505 0.47 -1.9 322,470 + LRK55_RS01505 0.47 -2.2 322,470 + LRK55_RS01505 0.47 +0.3 322,471 - LRK55_RS01505 0.47 -0.3 322,471 - LRK55_RS01505 0.47 -1.9 322,471 - LRK55_RS01505 0.47 -0.3 322,471 - LRK55_RS01505 0.47 -2.4 322,471 - LRK55_RS01505 0.47 -0.3 322,701 + LRK55_RS01505 0.68 +1.3 322,701 + LRK55_RS01505 0.68 -1.3 322,701 + LRK55_RS01505 0.68 +0.8 322,702 - LRK55_RS01505 0.69 -0.7 322,702 - LRK55_RS01505 0.69 +0.3 322,713 + LRK55_RS01505 0.70 +0.3 322,713 + LRK55_RS01505 0.70 -0.7 322,713 + LRK55_RS01505 0.70 +0.6 322,713 + LRK55_RS01505 0.70 -2.4 322,714 - LRK55_RS01505 0.70 -0.7 322,714 - LRK55_RS01505 0.70 -0.1 322,714 - LRK55_RS01505 0.70 -0.3 322,714 - LRK55_RS01505 0.70 -1.3 322,720 - LRK55_RS01505 0.70 -1.3 322,720 - LRK55_RS01505 0.70 -0.3 322,761 + LRK55_RS01505 0.74 -0.7 322,761 + LRK55_RS01505 0.74 -1.3 322,762 - LRK55_RS01505 0.74 -1.0
Or see this region's nucleotide sequence