Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS00965 and LRK55_RS00970 are separated by 145 nucleotides LRK55_RS00970 and LRK55_RS00975 are separated by 161 nucleotides LRK55_RS00975 and LRK55_RS00980 are separated by 83 nucleotides
LRK55_RS00965: LRK55_RS00965 - ACP S-malonyltransferase, at 214,416 to 215,363
_RS00965
LRK55_RS00970: LRK55_RS00970 - beta-ketoacyl-ACP synthase III, at 215,509 to 216,483
_RS00970
LRK55_RS00975: LRK55_RS00975 - 50S ribosomal protein L32, at 216,645 to 216,839
_RS00975
LRK55_RS00980: LRK55_RS00980 - YceD family protein, at 216,923 to 217,396
_RS00980
Position (kb) 215
216
217 Strain fitness (log2 ratio) -2
-1
0
1 at 215.419 kb on - strand at 215.419 kb on - strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.428 kb on + strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 215.429 kb on - strand at 216.502 kb on - strand at 216.502 kb on - strand at 216.502 kb on - strand at 216.502 kb on - strand at 216.502 kb on - strand at 216.502 kb on - strand at 216.502 kb on - strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.555 kb on + strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.556 kb on - strand at 216.563 kb on + strand at 216.563 kb on + strand at 216.563 kb on + strand at 216.563 kb on + strand at 216.563 kb on + strand at 216.564 kb on - strand at 216.564 kb on - strand at 216.564 kb on - strand at 216.564 kb on - strand at 216.925 kb on - strand at 216.925 kb on - strand at 216.925 kb on - strand at 216.925 kb on - strand at 216.925 kb on - strand at 216.925 kb on - strand at 216.925 kb on - strand at 217.436 kb on - strand at 217.436 kb on - strand at 217.436 kb on - strand at 217.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 215,419 - -0.5 215,419 - -1.3 215,428 + -0.3 215,428 + -0.5 215,428 + -2.5 215,428 + +0.7 215,428 + -2.1 215,428 + -0.6 215,429 - -0.7 215,429 - +1.0 215,429 - -2.5 215,429 - -0.5 215,429 - -0.9 215,429 - -0.5 215,429 - +0.9 215,429 - -0.6 215,429 - +1.1 216,502 - -0.5 216,502 - +1.5 216,502 - +0.2 216,502 - -1.0 216,502 - -1.4 216,502 - -0.0 216,502 - +0.3 216,555 + -0.5 216,555 + -0.3 216,555 + +1.0 216,555 + +0.4 216,555 + -1.1 216,555 + +0.4 216,555 + -0.9 216,555 + +0.4 216,555 + -2.3 216,555 + +0.5 216,555 + -0.9 216,555 + -1.2 216,555 + -0.3 216,555 + -2.5 216,555 + -1.3 216,555 + -0.6 216,555 + -0.2 216,555 + +0.9 216,555 + -1.4 216,555 + -0.6 216,555 + +0.3 216,556 - -2.6 216,556 - -0.1 216,556 - +0.1 216,556 - +0.6 216,556 - -0.4 216,556 - +0.4 216,556 - -0.9 216,556 - +0.3 216,556 - -0.2 216,556 - +0.4 216,556 - -0.5 216,556 - +0.4 216,556 - -1.0 216,556 - -0.0 216,556 - +0.4 216,556 - -0.9 216,556 - +0.6 216,556 - +0.2 216,556 - -1.6 216,556 - +0.5 216,556 - -0.4 216,556 - -0.2 216,563 + -0.5 216,563 + +1.5 216,563 + -0.5 216,563 + -0.5 216,563 + -1.3 216,564 - -0.2 216,564 - +0.9 216,564 - -1.3 216,564 - -0.2 216,925 - +1.2 216,925 - -0.5 216,925 - +0.0 216,925 - +0.7 216,925 - -0.5 216,925 - +0.0 216,925 - -1.9 217,436 - +1.3 217,436 - +0.5 217,436 - +0.2 217,450 - -1.3
Or see this region's nucleotide sequence