Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS13980

Experiment: Anaerobic, pH7.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, pH7.5
2,961,890	+				-2.1
2,961,891	-				-2.7
2,961,912	+				-3.0
2,961,912	+				-1.6
2,961,912	+				-2.7
2,961,912	+				-2.8
2,961,912	+				-2.2
2,961,912	+				-2.5
2,961,912	+				-3.3
2,961,912	+				-2.2
2,961,913	-				-2.4
2,961,913	-				-1.9
2,961,913	-				-2.7
2,961,913	-				-1.6
2,961,913	-				-3.1
2,961,913	-				-3.3
2,961,913	-				-3.4
2,962,051	+				-2.3
2,962,051	+				-3.0
2,962,051	+				-1.1
2,962,052	-				-3.2
2,962,052	-				-2.2
2,962,052	-				-1.4
2,962,052	-				-1.3
2,962,052	-				-2.9
2,962,114	+				-3.7
2,962,114	+				-3.0
2,962,114	+				-3.3
2,962,115	-				-3.3
2,962,115	-				-1.7
2,962,115	-				-2.5
2,962,115	-				-2.1
2,962,115	-				-2.0
2,962,232	+		ABCV34_RS13975	0.22	-3.1
2,962,232	+		ABCV34_RS13975	0.22	-1.8
2,962,232	+		ABCV34_RS13975	0.22	-2.8
2,962,232	+		ABCV34_RS13975	0.22	-2.5
2,962,232	+		ABCV34_RS13975	0.22	-2.8
2,962,233	-		ABCV34_RS13975	0.22	-3.3
2,962,233	-		ABCV34_RS13975	0.22	-2.1
2,962,233	-		ABCV34_RS13975	0.22	-3.2
2,962,233	-		ABCV34_RS13975	0.22	-2.6
2,962,233	-		ABCV34_RS13975	0.22	-2.2
2,962,233	-		ABCV34_RS13975	0.22	-3.1
2,962,233	-		ABCV34_RS13975	0.22	-2.6
2,962,233	-		ABCV34_RS13975	0.22	-3.3
2,962,463	+		ABCV34_RS13975	0.63	-2.5
2,962,499	+		ABCV34_RS13975	0.69	-2.3
2,962,499	+		ABCV34_RS13975	0.69	-3.0
2,962,499	+		ABCV34_RS13975	0.69	-2.6
2,962,499	+		ABCV34_RS13975	0.69	-2.9
2,962,499	+		ABCV34_RS13975	0.69	-1.3
2,962,499	+		ABCV34_RS13975	0.69	-2.4
2,962,499	+		ABCV34_RS13975	0.69	-3.0
2,962,499	+		ABCV34_RS13975	0.69	-3.5
2,962,499	+		ABCV34_RS13975	0.69	-2.7
2,962,499	+		ABCV34_RS13975	0.69	-3.3
2,962,499	+		ABCV34_RS13975	0.69	-3.6
2,962,499	+		ABCV34_RS13975	0.69	-3.2
2,962,499	+		ABCV34_RS13975	0.69	-3.5
2,962,499	+		ABCV34_RS13975	0.69	-2.3
2,962,499	+		ABCV34_RS13975	0.69	-2.8
2,962,499	+		ABCV34_RS13975	0.69	-4.3
2,962,499	+		ABCV34_RS13975	0.69	-1.8
2,962,499	+		ABCV34_RS13975	0.69	-2.7
2,962,499	+		ABCV34_RS13975	0.69	-2.6
2,962,499	+		ABCV34_RS13975	0.69	-2.8
2,962,499	+		ABCV34_RS13975	0.69	-2.2
2,962,499	+		ABCV34_RS13975	0.69	-0.7
2,962,500	-		ABCV34_RS13975	0.70	-2.1
2,962,500	-		ABCV34_RS13975	0.70	-2.6
2,962,500	-		ABCV34_RS13975	0.70	-2.2
2,962,500	-		ABCV34_RS13975	0.70	-2.7
2,962,500	-		ABCV34_RS13975	0.70	-2.6
2,962,500	-		ABCV34_RS13975	0.70	-2.5
2,962,500	-		ABCV34_RS13975	0.70	-2.0
2,962,500	-		ABCV34_RS13975	0.70	-2.7
2,962,500	-		ABCV34_RS13975	0.70	-3.1
2,962,500	-		ABCV34_RS13975	0.70	-2.1
2,962,500	-		ABCV34_RS13975	0.70	-0.3
2,962,500	-		ABCV34_RS13975	0.70	-1.9
2,962,500	-		ABCV34_RS13975	0.70	-3.1
2,962,500	-		ABCV34_RS13975	0.70	-1.6
2,962,500	-		ABCV34_RS13975	0.70	-3.6
2,962,500	-		ABCV34_RS13975	0.70	-2.4
2,962,500	-		ABCV34_RS13975	0.70	-1.5
2,962,500	-		ABCV34_RS13975	0.70	-3.4
2,962,500	-		ABCV34_RS13975	0.70	-2.6
2,962,500	-		ABCV34_RS13975	0.70	-2.9
2,962,500	-		ABCV34_RS13975	0.70	-3.4
2,962,556	+		ABCV34_RS13975	0.79	-2.1
2,962,556	+		ABCV34_RS13975	0.79	-3.0
2,962,556	+		ABCV34_RS13975	0.79	-2.2
2,962,556	+		ABCV34_RS13975	0.79	-2.7
2,962,557	-		ABCV34_RS13975	0.80	-1.7
2,962,557	-		ABCV34_RS13975	0.80	-2.8
2,962,557	-		ABCV34_RS13975	0.80	-3.1
2,962,557	-		ABCV34_RS13975	0.80	-3.2
2,962,563	+		ABCV34_RS13975	0.81	-2.6
2,962,563	+		ABCV34_RS13975	0.81	-2.7
2,962,597	+		ABCV34_RS13975	0.87	-2.1
2,962,664	-				-2.3
2,962,664	-				-2.8
2,962,664	-				-2.2
2,962,664	-				-2.4
2,962,678	+				-2.3
2,962,678	+				-2.6
2,962,678	+				-2.8
2,962,678	+				-2.9
2,962,678	+				-1.3
2,962,678	+				-3.3
2,962,679	-				-2.9
2,962,679	-				-2.5
2,962,679	-				-2.9
2,962,679	-				-2.8
2,962,702	+				-1.1
2,962,702	+				-1.7
2,962,703	-				-2.1
2,962,703	-				-3.3
2,962,703	-				-2.3
2,962,703	-				-2.1
2,962,976	+		ABCV34_RS13980	0.30	-2.4
2,962,976	+		ABCV34_RS13980	0.30	-0.8
2,962,976	+		ABCV34_RS13980	0.30	-2.7
2,962,977	-		ABCV34_RS13980	0.30	-3.1
2,962,978	+		ABCV34_RS13980	0.30	-2.1
2,962,978	+		ABCV34_RS13980	0.30	-3.1
2,962,978	+		ABCV34_RS13980	0.30	-3.5
2,962,978	+		ABCV34_RS13980	0.30	-2.9
2,962,978	+		ABCV34_RS13980	0.30	-2.7
2,962,978	+		ABCV34_RS13980	0.30	-2.3
2,962,978	+		ABCV34_RS13980	0.30	-2.7
2,962,978	+		ABCV34_RS13980	0.30	-2.5
2,962,979	-		ABCV34_RS13980	0.30	-3.3
2,962,979	-		ABCV34_RS13980	0.30	-3.7
2,962,979	-		ABCV34_RS13980	0.30	-1.7
2,962,979	-		ABCV34_RS13980	0.30	-2.7
2,963,002	+		ABCV34_RS13980	0.33	-3.1
2,963,002	+		ABCV34_RS13980	0.33	-2.8
2,963,003	-		ABCV34_RS13980	0.33	-3.1
2,963,003	-		ABCV34_RS13980	0.33	-3.4
2,963,032	+		ABCV34_RS13980	0.36	-2.6
2,963,032	+		ABCV34_RS13980	0.36	-4.9
2,963,032	+		ABCV34_RS13980	0.36	-2.2
2,963,032	+		ABCV34_RS13980	0.36	-2.4
2,963,032	+		ABCV34_RS13980	0.36	-2.9
2,963,033	-		ABCV34_RS13980	0.36	-2.3
2,963,033	-		ABCV34_RS13980	0.36	-1.3
2,963,033	-		ABCV34_RS13980	0.36	-2.2
2,963,033	-		ABCV34_RS13980	0.36	-3.0
2,963,033	-		ABCV34_RS13980	0.36	-3.1
2,963,033	-		ABCV34_RS13980	0.36	-3.3
2,963,033	-		ABCV34_RS13980	0.36	-2.7
2,963,033	-		ABCV34_RS13980	0.36	-2.4
2,963,089	+		ABCV34_RS13980	0.41	-2.6
2,963,089	+		ABCV34_RS13980	0.41	-2.5
2,963,249	-		ABCV34_RS13980	0.57	-3.6
2,963,335	+		ABCV34_RS13980	0.66	-4.6
2,963,335	+		ABCV34_RS13980	0.66	-3.0
2,963,335	+		ABCV34_RS13980	0.66	-2.0
2,963,335	+		ABCV34_RS13980	0.66	-2.7
2,963,336	-		ABCV34_RS13980	0.66	-5.0
2,963,336	-		ABCV34_RS13980	0.66	-2.2
2,963,336	-		ABCV34_RS13980	0.66	-1.4
2,963,350	+		ABCV34_RS13980	0.68	-2.7
2,963,350	+		ABCV34_RS13980	0.68	-3.0
2,963,350	+		ABCV34_RS13980	0.68	-2.9
2,963,350	+		ABCV34_RS13980	0.68	-0.1
2,963,350	+		ABCV34_RS13980	0.68	-3.5
2,963,350	+		ABCV34_RS13980	0.68	-2.4
2,963,350	+		ABCV34_RS13980	0.68	-3.9
2,963,350	+		ABCV34_RS13980	0.68	-3.5
2,963,350	+		ABCV34_RS13980	0.68	-1.9
2,963,350	+		ABCV34_RS13980	0.68	-2.9
2,963,351	-		ABCV34_RS13980	0.68	-3.2
2,963,351	-		ABCV34_RS13980	0.68	-0.7
2,963,351	-		ABCV34_RS13980	0.68	-3.1
2,963,351	-		ABCV34_RS13980	0.68	-3.0
2,963,351	-		ABCV34_RS13980	0.68	-3.0
2,963,351	-		ABCV34_RS13980	0.68	-1.5
2,963,351	-		ABCV34_RS13980	0.68	-0.7
2,963,351	-		ABCV34_RS13980	0.68	-2.8
2,963,351	-		ABCV34_RS13980	0.68	-2.3
2,963,351	-		ABCV34_RS13980	0.68	-2.2
2,963,351	-		ABCV34_RS13980	0.68	-3.9
2,963,351	-		ABCV34_RS13980	0.68	-2.1
2,963,351	-		ABCV34_RS13980	0.68	-2.1
2,963,351	-		ABCV34_RS13980	0.68	-2.1
2,963,467	+		ABCV34_RS13980	0.79	-2.5
2,963,467	+		ABCV34_RS13980	0.79	-3.3
2,963,467	+		ABCV34_RS13980	0.79	-2.7
2,963,467	+		ABCV34_RS13980	0.79	-2.5
2,963,468	-		ABCV34_RS13980	0.79	-2.1
2,963,468	-		ABCV34_RS13980	0.79	-2.9
2,963,468	-		ABCV34_RS13980	0.79	-2.5
2,963,468	-		ABCV34_RS13980	0.79	-1.4
2,963,468	-		ABCV34_RS13980	0.79	-2.6
2,963,468	-		ABCV34_RS13980	0.79	-3.3
2,963,486	-		ABCV34_RS13980	0.81	-2.2
2,963,539	+		ABCV34_RS13980	0.87	-3.7
2,963,539	+		ABCV34_RS13980	0.87	-2.7
2,963,539	+		ABCV34_RS13980	0.87	-2.2
2,963,539	+		ABCV34_RS13980	0.87	-3.2
2,963,539	+		ABCV34_RS13980	0.87	-3.1
2,963,540	-		ABCV34_RS13980	0.87	-1.9
2,963,689	+				-2.6
2,963,689	+				-2.3
2,963,690	-				-2.0
2,963,690	-				-3.4
2,963,690	-				-2.1
2,963,690	-				-3.0
2,963,690	-				-2.9
2,963,694	+				-3.8
2,963,694	+				-4.1
2,963,695	-				-2.5
2,963,695	-				-2.5
2,963,695	-				-2.9
2,963,695	-				-2.6
2,963,695	-				-3.7
2,963,698	+				-2.3
2,963,699	-				-3.3
2,963,718	+				-2.7
2,963,718	+				-2.7
2,963,718	+				-2.3
2,963,719	-				-3.9
2,963,719	-				-2.6
2,963,719	-				-4.8
2,963,719	-				-1.7
2,963,719	-				-4.2
2,963,719	-				-3.3
2,963,784	+				-3.1
2,963,784	+				-1.1
2,963,784	+				-3.4
2,963,784	+				-2.2
2,963,784	+				-4.0
2,963,784	+				-2.7
2,963,784	+				-1.2
2,963,784	+				-2.6
2,963,784	+				-1.1
2,963,784	+				-2.3
2,963,785	-				-2.4
2,963,785	-				-2.6
2,963,785	-				-3.6
2,963,785	-				-2.7
2,963,785	-				-2.0
2,963,785	-				-3.0
2,963,785	-				-2.3
2,963,788	+				-2.8
2,963,788	+				-2.4
2,963,788	+				-3.1
2,963,788	+				-2.1
2,963,788	+				-2.6
2,963,788	+				-2.4
2,963,788	+				-3.6
2,963,788	+				-3.7
2,963,788	+				-1.3
2,963,788	+				-2.3
2,963,788	+				-2.2
2,963,788	+				-1.8
2,963,788	+				-3.0
2,963,788	+				-2.0
2,963,788	+				-2.0
2,963,788	+				-2.5
2,963,788	+				-3.3
2,963,788	+				-3.6
2,963,788	+				-2.4
2,963,788	+				-3.1
2,963,788	+				-2.8
2,963,788	+				-2.4
2,963,788	+				-2.8
2,963,788	+				-1.7
2,963,788	+				-3.1
2,963,789	-				-3.0
2,963,789	-				-2.8
2,963,789	-				-3.6
2,963,789	-				-2.0
2,963,789	-				-2.7
2,963,789	-				-3.8
2,963,789	-				-3.8
2,963,789	-				-2.7
2,963,789	-				-2.5
2,963,789	-				-2.3
2,963,789	-				-3.1
2,963,789	-				-3.8
2,963,789	-				-2.4
2,963,789	-				-2.7
2,963,789	-				-3.0
2,963,789	-				-1.1
2,963,789	-				-2.4
2,963,789	-				-3.3
2,963,789	-				-2.9
2,963,789	-				-3.0
2,963,789	-				-1.7
2,963,789	-				-2.9
2,963,789	-				-2.8
2,963,789	-				-0.8
2,963,789	-				-2.3
2,963,789	-				-3.9
2,963,789	-				-3.3
2,963,789	-				-2.4
2,963,791	-				-2.6
2,963,858	+				-2.2
2,963,858	+				-3.0
2,963,858	+				-1.5
2,963,859	-				-2.7
2,963,859	-				-3.5
2,964,127	+		ABCV34_RS13985	0.15	-2.4
2,964,127	+		ABCV34_RS13985	0.15	-2.4
2,964,127	+		ABCV34_RS13985	0.15	-2.9
2,964,127	+		ABCV34_RS13985	0.15	-2.2
2,964,208	+		ABCV34_RS13985	0.19	-2.1
2,964,209	-		ABCV34_RS13985	0.19	-2.4
2,964,509	+		ABCV34_RS13985	0.34	-2.5
2,964,509	+		ABCV34_RS13985	0.34	-2.4
2,964,509	+		ABCV34_RS13985	0.34	-2.6
2,964,509	+		ABCV34_RS13985	0.34	-2.6
2,964,509	+		ABCV34_RS13985	0.34	-2.2
2,964,509	+		ABCV34_RS13985	0.34	-1.8
2,964,509	+		ABCV34_RS13985	0.34	-2.7
2,964,509	+		ABCV34_RS13985	0.34	-2.5
2,964,509	+		ABCV34_RS13985	0.34	-1.9
2,964,510	-		ABCV34_RS13985	0.34	-1.5
2,964,510	-		ABCV34_RS13985	0.34	-2.6
2,964,512	-		ABCV34_RS13985	0.34	-3.0
2,964,551	+		ABCV34_RS13985	0.36	-2.9
2,964,552	-		ABCV34_RS13985	0.36	-3.4
2,964,552	-		ABCV34_RS13985	0.36	-2.8
2,964,598	+		ABCV34_RS13985	0.39	-3.5
2,964,598	+		ABCV34_RS13985	0.39	-2.9
2,964,599	-		ABCV34_RS13985	0.39	-2.0