Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS05450

Experiment: Anaerobic, pH7.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, pH7.5
1,184,670	-		ABCV34_RS05440	0.60	-2.5
1,184,677	+		ABCV34_RS05440	0.62	-2.9
1,184,977	+		ABCV34_RS05445	0.20	-1.9
1,184,983	-		ABCV34_RS05445	0.21	-3.9
1,185,044	+		ABCV34_RS05445	0.34	-1.5
1,185,051	-		ABCV34_RS05445	0.35	-2.5
1,185,112	-		ABCV34_RS05445	0.48	-1.2
1,185,113	+		ABCV34_RS05445	0.48	-0.9
1,185,129	-		ABCV34_RS05445	0.51	-1.2
1,185,206	-		ABCV34_RS05445	0.67	-1.5
1,185,384	+				-0.9
1,185,481	+		ABCV34_RS05450	0.28	+0.1
1,185,551	+		ABCV34_RS05450	0.49	+0.1
1,185,629	-		ABCV34_RS05450	0.72	-0.9
1,185,739	+				-2.2
1,185,900	+				-2.2
1,185,900	+				-2.6
1,185,901	-				-1.6
1,185,901	-				-3.4
1,185,901	-				-1.9
1,185,901	-				-3.2
1,185,901	-				-2.9
1,185,911	-				-1.2
1,186,007	-				-2.1
1,186,015	+				-1.7
1,186,015	+				-3.5
1,186,015	+				-2.1
1,186,015	+				-1.5
1,186,015	+				-4.0
1,186,015	+				-3.0
1,186,015	+				-3.2
1,186,016	-				-0.7
1,186,016	-				-3.7
1,186,016	-				-2.4
1,186,016	-				-2.2
1,186,051	-				-2.0
1,186,051	-				-3.3
1,186,090	+		ABCV34_RS05455	0.20	-0.9
1,186,090	+		ABCV34_RS05455	0.20	-2.3
1,186,090	+		ABCV34_RS05455	0.20	-1.5
1,186,091	-		ABCV34_RS05455	0.20	-4.2
1,186,116	+		ABCV34_RS05455	0.27	-3.7
1,186,264	+		ABCV34_RS05455	0.68	-2.1
1,186,264	+		ABCV34_RS05455	0.68	-2.9
1,186,265	-		ABCV34_RS05455	0.68	-2.1
1,186,265	-		ABCV34_RS05455	0.68	-4.2
1,186,291	-		ABCV34_RS05455	0.75	-2.3
1,186,291	-		ABCV34_RS05455	0.75	-2.9
1,186,321	+		ABCV34_RS05455	0.83	-3.2
1,186,321	+		ABCV34_RS05455	0.83	-4.1
1,186,322	-		ABCV34_RS05455	0.84	-2.2
1,186,322	-		ABCV34_RS05455	0.84	-1.2
1,186,341	+		ABCV34_RS05455	0.89	-3.4
1,186,342	-		ABCV34_RS05455	0.89	-3.1
1,186,347	+				-2.2
1,186,347	+				-3.2
1,186,348	-				+0.1
1,186,348	-				-2.6
1,186,387	+				-2.4
1,186,387	+				+0.7
1,186,388	-				-3.6
1,186,388	-				-2.4
1,186,388	-				-0.9
1,186,437	+				-1.9
1,186,451	+				-2.5
1,186,451	+				-1.1
1,186,452	-				-2.5
1,186,452	-				-1.2
1,186,490	+				-2.1
1,186,490	+				-3.1
1,186,490	+				-2.9
1,186,491	-				+0.1
1,186,491	-				-1.5
1,186,528	+				-2.5
1,186,528	+				-2.5
1,186,528	+				-2.6
1,186,529	-				-2.6
1,186,529	-				-1.4
1,186,529	-				-3.7
1,186,529	-				-1.5
1,186,577	+				-2.8
1,186,577	+				-2.3
1,186,577	+				-3.4
1,186,577	+				-1.3
1,186,577	+				-4.1
1,186,577	+				-1.8
1,186,577	+				-2.2
1,186,578	-				+0.1
1,186,578	-				-3.2
1,186,578	-				-1.9
1,186,578	-				-0.9
1,186,578	-				-1.5
1,186,600	+				-2.2
1,186,670	+				-2.2
1,186,670	+				+0.1
1,186,670	+				-1.5
1,186,670	+				-3.0
1,186,670	+				-1.7
1,186,670	+				-3.5
1,186,670	+				-2.6
1,186,671	-				-0.9
1,186,671	-				-1.5
1,186,671	-				-3.1
1,186,671	-				-1.5
1,186,671	-				-0.7
1,186,671	-				-2.9
1,186,671	-				-2.7
1,186,671	-				-1.9
1,186,703	-				-1.5