Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS09395

Experiment: Anaerobic, pH5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, pH5.5
2,009,704	-				-2.2
2,009,704	-				-1.6
2,009,704	-				-3.4
2,009,737	-				-2.4
2,009,737	-				-1.6
2,009,737	-				-2.1
2,009,865	+				-2.1
2,009,866	-				-2.8
2,009,868	-				-3.1
2,009,897	+				-0.1
2,009,923	+				-3.1
2,010,642	+				-3.1
2,010,643	-				-3.4
2,010,756	+		ABCV34_RS09395	0.17	-3.8
2,010,756	+		ABCV34_RS09395	0.17	-3.2
2,010,757	-		ABCV34_RS09395	0.17	-4.2
2,010,757	-		ABCV34_RS09395	0.17	-3.8
2,010,757	-		ABCV34_RS09395	0.17	-2.4
2,010,757	-		ABCV34_RS09395	0.17	-2.1
2,010,757	-		ABCV34_RS09395	0.17	-3.5
2,010,757	-		ABCV34_RS09395	0.17	-3.9
2,010,763	+		ABCV34_RS09395	0.18	-2.3
2,010,763	+		ABCV34_RS09395	0.18	-5.3
2,010,763	+		ABCV34_RS09395	0.18	-4.1
2,010,764	-		ABCV34_RS09395	0.18	-3.2
2,010,764	-		ABCV34_RS09395	0.18	-2.2
2,010,764	-		ABCV34_RS09395	0.18	-5.5
2,010,764	-		ABCV34_RS09395	0.18	-3.7
2,010,764	-		ABCV34_RS09395	0.18	-4.7
2,010,764	-		ABCV34_RS09395	0.18	-5.6
2,010,764	-		ABCV34_RS09395	0.18	-3.9
2,010,789	+		ABCV34_RS09395	0.21	-3.1
2,010,789	+		ABCV34_RS09395	0.21	-2.1
2,010,789	+		ABCV34_RS09395	0.21	-3.5
2,010,789	+		ABCV34_RS09395	0.21	-3.6
2,010,790	-		ABCV34_RS09395	0.22	-1.1
2,010,790	-		ABCV34_RS09395	0.22	-4.1
2,010,909	+		ABCV34_RS09395	0.39	-4.5
2,010,909	+		ABCV34_RS09395	0.39	-5.3
2,010,909	+		ABCV34_RS09395	0.39	-1.1
2,010,909	+		ABCV34_RS09395	0.39	-2.7
2,010,910	-		ABCV34_RS09395	0.39	-3.9
2,010,910	-		ABCV34_RS09395	0.39	-4.5
2,010,910	-		ABCV34_RS09395	0.39	-5.8
2,011,023	+		ABCV34_RS09395	0.55	-2.5
2,011,023	+		ABCV34_RS09395	0.55	-2.9
2,011,023	+		ABCV34_RS09395	0.55	-1.1
2,011,023	+		ABCV34_RS09395	0.55	-4.2
2,011,023	+		ABCV34_RS09395	0.55	-4.6
2,011,023	+		ABCV34_RS09395	0.55	-4.6
2,011,023	+		ABCV34_RS09395	0.55	-1.1
2,011,023	+		ABCV34_RS09395	0.55	-4.0
2,011,023	+		ABCV34_RS09395	0.55	-3.5
2,011,023	+		ABCV34_RS09395	0.55	-5.6
2,011,023	+		ABCV34_RS09395	0.55	-5.3
2,011,024	-		ABCV34_RS09395	0.56	-2.4
2,011,024	-		ABCV34_RS09395	0.56	-3.2
2,011,024	-		ABCV34_RS09395	0.56	-3.1
2,011,024	-		ABCV34_RS09395	0.56	-4.9
2,011,024	-		ABCV34_RS09395	0.56	-4.8
2,011,024	-		ABCV34_RS09395	0.56	-2.7
2,011,024	-		ABCV34_RS09395	0.56	-4.1
2,011,178	+		ABCV34_RS09395	0.78	-3.4
2,011,222	+		ABCV34_RS09395	0.84	-2.6
2,011,223	-		ABCV34_RS09395	0.84	-3.1
2,011,223	-		ABCV34_RS09395	0.84	-4.2
2,011,223	-		ABCV34_RS09395	0.84	-3.1
2,011,223	-		ABCV34_RS09395	0.84	-4.7
2,011,223	-		ABCV34_RS09395	0.84	-4.5
2,011,223	-		ABCV34_RS09395	0.84	-2.8
2,011,223	-		ABCV34_RS09395	0.84	-4.7
2,011,223	-		ABCV34_RS09395	0.84	-2.5
2,011,223	-		ABCV34_RS09395	0.84	-2.8
2,011,223	-		ABCV34_RS09395	0.84	-3.8
2,011,223	-		ABCV34_RS09395	0.84	-4.5
2,011,223	-		ABCV34_RS09395	0.84	-3.8
2,011,223	-		ABCV34_RS09395	0.84	-2.3
2,011,223	-		ABCV34_RS09395	0.84	-4.3
2,011,223	-		ABCV34_RS09395	0.84	-2.8
2,011,223	-		ABCV34_RS09395	0.84	-2.9
2,011,223	-		ABCV34_RS09395	0.84	-4.9
2,011,223	-		ABCV34_RS09395	0.84	-3.8
2,011,843	-		ABCV34_RS09400	0.69	-3.8
2,011,843	-		ABCV34_RS09400	0.69	-4.2
2,011,844	+		ABCV34_RS09400	0.69	-2.4
2,011,844	+		ABCV34_RS09400	0.69	-1.5
2,011,845	-		ABCV34_RS09400	0.69	-3.5
2,011,845	-		ABCV34_RS09400	0.69	-2.6
2,011,845	-		ABCV34_RS09400	0.69	-2.6
2,011,845	-		ABCV34_RS09400	0.69	-3.2
2,011,845	-		ABCV34_RS09400	0.69	-2.9
2,011,845	-		ABCV34_RS09400	0.69	-2.1
2,012,090	+				-1.5
2,012,090	+				-1.6
2,012,090	+				-2.4
2,012,090	+				-3.9
2,012,090	+				-3.2
2,012,091	-				-4.9
2,012,091	-				-2.6