Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03248

Experiment: mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03247 and MPMX20_03248 are separated by 36 nucleotidesMPMX20_03248 and MPMX20_03249 are separated by 211 nucleotidesMPMX20_03249 and MPMX20_03250 are separated by 28 nucleotides MPMX20_03247: MPMX20_03247 - Amidophosphoribosyltransferase, at 3,416,749 to 3,418,266 _03247 MPMX20_03248: MPMX20_03248 - Colicin V production protein, at 3,418,303 to 3,418,791 _03248 MPMX20_03249: MPMX20_03249 - Cell division protein DedD, at 3,419,003 to 3,419,665 _03249 MPMX20_03250: MPMX20_03250 - Dihydrofolate synthase/folylpolyglutamate synthase, at 3,419,694 to 3,420,962 _03250 Position (kb) 3418 3419Strain fitness (log2 ratio) -2 -1 0 1at 3417.515 kb on - strand, within MPMX20_03247at 3417.545 kb on - strand, within MPMX20_03247at 3417.568 kb on + strand, within MPMX20_03247at 3417.576 kb on - strand, within MPMX20_03247at 3417.621 kb on - strand, within MPMX20_03247at 3417.760 kb on + strand, within MPMX20_03247at 3417.770 kb on + strand, within MPMX20_03247at 3417.818 kb on + strand, within MPMX20_03247at 3417.901 kb on - strand, within MPMX20_03247at 3417.972 kb on + strand, within MPMX20_03247at 3417.972 kb on + strand, within MPMX20_03247at 3418.069 kb on + strand, within MPMX20_03247at 3418.152 kb on + strandat 3418.160 kb on - strandat 3418.181 kb on + strandat 3418.189 kb on + strandat 3418.189 kb on - strandat 3418.195 kb on - strandat 3418.208 kb on - strandat 3418.208 kb on - strandat 3418.330 kb on + strandat 3418.427 kb on - strand, within MPMX20_03248at 3418.427 kb on - strand, within MPMX20_03248at 3418.438 kb on + strand, within MPMX20_03248at 3418.486 kb on - strand, within MPMX20_03248at 3418.557 kb on - strand, within MPMX20_03248at 3418.585 kb on - strand, within MPMX20_03248at 3418.655 kb on + strand, within MPMX20_03248at 3418.663 kb on - strand, within MPMX20_03248at 3418.663 kb on - strand, within MPMX20_03248at 3418.786 kb on + strandat 3418.788 kb on + strandat 3418.943 kb on - strandat 3418.943 kb on - strandat 3418.974 kb on - strandat 3418.983 kb on + strandat 3418.983 kb on + strandat 3418.983 kb on + strandat 3418.989 kb on + strandat 3418.991 kb on - strandat 3418.991 kb on - strandat 3418.997 kb on - strandat 3419.023 kb on + strandat 3419.033 kb on + strandat 3419.070 kb on + strand, within MPMX20_03249at 3419.092 kb on + strand, within MPMX20_03249at 3419.092 kb on + strand, within MPMX20_03249at 3419.161 kb on + strand, within MPMX20_03249at 3419.161 kb on + strand, within MPMX20_03249at 3419.161 kb on + strand, within MPMX20_03249at 3419.169 kb on - strand, within MPMX20_03249at 3419.169 kb on - strand, within MPMX20_03249at 3419.169 kb on - strand, within MPMX20_03249at 3419.376 kb on + strand, within MPMX20_03249at 3419.384 kb on - strand, within MPMX20_03249at 3419.509 kb on + strand, within MPMX20_03249at 3419.673 kb on - strandat 3419.673 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A
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3,417,515 - MPMX20_03247 0.50 -0.0
3,417,545 - MPMX20_03247 0.52 -0.8
3,417,568 + MPMX20_03247 0.54 -0.7
3,417,576 - MPMX20_03247 0.54 +0.2
3,417,621 - MPMX20_03247 0.57 +0.9
3,417,760 + MPMX20_03247 0.67 -0.8
3,417,770 + MPMX20_03247 0.67 +0.7
3,417,818 + MPMX20_03247 0.70 +0.1
3,417,901 - MPMX20_03247 0.76 +0.9
3,417,972 + MPMX20_03247 0.81 +0.6
3,417,972 + MPMX20_03247 0.81 +0.3
3,418,069 + MPMX20_03247 0.87 +0.6
3,418,152 + -2.1
3,418,160 - +0.8
3,418,181 + -0.7
3,418,189 + +0.4
3,418,189 - -0.2
3,418,195 - -1.0
3,418,208 - +0.5
3,418,208 - -1.1
3,418,330 + -0.4
3,418,427 - MPMX20_03248 0.25 -1.0
3,418,427 - MPMX20_03248 0.25 -0.4
3,418,438 + MPMX20_03248 0.28 +1.4
3,418,486 - MPMX20_03248 0.37 -0.7
3,418,557 - MPMX20_03248 0.52 -0.7
3,418,585 - MPMX20_03248 0.58 -0.6
3,418,655 + MPMX20_03248 0.72 -0.8
3,418,663 - MPMX20_03248 0.74 -1.5
3,418,663 - MPMX20_03248 0.74 -0.3
3,418,786 + -0.7
3,418,788 + -0.2
3,418,943 - -0.5
3,418,943 - -0.7
3,418,974 - -0.2
3,418,983 + -2.1
3,418,983 + +0.6
3,418,983 + -0.4
3,418,989 + +0.3
3,418,991 - -0.3
3,418,991 - -1.1
3,418,997 - -0.1
3,419,023 + -0.1
3,419,033 + -0.2
3,419,070 + MPMX20_03249 0.10 -0.2
3,419,092 + MPMX20_03249 0.13 +1.0
3,419,092 + MPMX20_03249 0.13 +0.6
3,419,161 + MPMX20_03249 0.24 +0.3
3,419,161 + MPMX20_03249 0.24 +0.2
3,419,161 + MPMX20_03249 0.24 -0.3
3,419,169 - MPMX20_03249 0.25 -0.6
3,419,169 - MPMX20_03249 0.25 +0.3
3,419,169 - MPMX20_03249 0.25 -0.1
3,419,376 + MPMX20_03249 0.56 -0.3
3,419,384 - MPMX20_03249 0.57 -1.6
3,419,509 + MPMX20_03249 0.76 +0.3
3,419,673 - -0.3
3,419,673 - -0.2

Or see this region's nucleotide sequence