Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02757

Experiment: mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02756 and MPMX20_02757 are separated by 234 nucleotidesMPMX20_02757 and MPMX20_02758 are separated by 339 nucleotides MPMX20_02756: MPMX20_02756 - Phosphogluconate dehydratase, at 2,910,290 to 2,912,101 _02756 MPMX20_02757: MPMX20_02757 - Glucose-6-phosphate 1-dehydrogenase, at 2,912,336 to 2,913,811 _02757 MPMX20_02758: MPMX20_02758 - HTH-type transcriptional regulator HexR, at 2,914,151 to 2,915,038 _02758 Position (kb) 2912 2913 2914Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2911.362 kb on + strand, within MPMX20_02756at 2911.416 kb on + strand, within MPMX20_02756at 2911.419 kb on - strand, within MPMX20_02756at 2911.423 kb on - strand, within MPMX20_02756at 2911.497 kb on + strand, within MPMX20_02756at 2911.497 kb on + strand, within MPMX20_02756at 2911.505 kb on - strand, within MPMX20_02756at 2911.505 kb on - strand, within MPMX20_02756at 2911.505 kb on - strand, within MPMX20_02756at 2911.611 kb on + strand, within MPMX20_02756at 2911.611 kb on + strand, within MPMX20_02756at 2911.622 kb on + strand, within MPMX20_02756at 2911.676 kb on - strand, within MPMX20_02756at 2911.684 kb on + strand, within MPMX20_02756at 2911.718 kb on + strand, within MPMX20_02756at 2911.723 kb on + strand, within MPMX20_02756at 2911.726 kb on - strand, within MPMX20_02756at 2911.726 kb on - strand, within MPMX20_02756at 2911.732 kb on + strand, within MPMX20_02756at 2911.737 kb on + strand, within MPMX20_02756at 2911.745 kb on - strand, within MPMX20_02756at 2911.812 kb on - strand, within MPMX20_02756at 2911.976 kb on - strandat 2911.979 kb on + strandat 2912.009 kb on - strandat 2912.017 kb on + strandat 2912.053 kb on - strandat 2912.053 kb on - strandat 2912.053 kb on - strandat 2912.355 kb on - strandat 2912.355 kb on - strandat 2912.355 kb on - strandat 2912.357 kb on - strandat 2912.357 kb on - strandat 2912.357 kb on - strandat 2912.377 kb on - strandat 2912.395 kb on + strandat 2912.395 kb on + strandat 2912.403 kb on - strandat 2912.403 kb on - strandat 2912.403 kb on - strandat 2912.442 kb on + strandat 2912.562 kb on - strand, within MPMX20_02757at 2912.602 kb on + strand, within MPMX20_02757at 2912.770 kb on + strand, within MPMX20_02757at 2912.922 kb on + strand, within MPMX20_02757at 2912.951 kb on - strand, within MPMX20_02757at 2913.124 kb on - strand, within MPMX20_02757at 2913.130 kb on + strand, within MPMX20_02757at 2913.135 kb on + strand, within MPMX20_02757at 2913.254 kb on + strand, within MPMX20_02757at 2913.262 kb on - strand, within MPMX20_02757at 2913.296 kb on + strand, within MPMX20_02757at 2913.355 kb on - strand, within MPMX20_02757at 2913.424 kb on - strand, within MPMX20_02757at 2913.535 kb on + strand, within MPMX20_02757at 2913.623 kb on + strand, within MPMX20_02757at 2913.672 kb on - strandat 2913.785 kb on + strandat 2913.793 kb on - strandat 2913.793 kb on - strandat 2913.834 kb on + strandat 2913.834 kb on + strandat 2913.878 kb on - strandat 2913.883 kb on - strandat 2913.888 kb on - strandat 2913.888 kb on - strandat 2913.893 kb on - strandat 2913.912 kb on + strandat 2913.920 kb on - strandat 2914.019 kb on + strandat 2914.020 kb on - strandat 2914.062 kb on + strandat 2914.063 kb on + strandat 2914.068 kb on + strandat 2914.076 kb on - strandat 2914.076 kb on - strandat 2914.102 kb on - strandat 2914.153 kb on - strandat 2914.159 kb on + strandat 2914.199 kb on + strandat 2914.268 kb on + strand, within MPMX20_02758at 2914.302 kb on - strand, within MPMX20_02758at 2914.447 kb on - strand, within MPMX20_02758at 2914.486 kb on + strand, within MPMX20_02758at 2914.491 kb on + strand, within MPMX20_02758at 2914.653 kb on + strand, within MPMX20_02758at 2914.675 kb on - strand, within MPMX20_02758at 2914.675 kb on - strand, within MPMX20_02758at 2914.711 kb on - strand, within MPMX20_02758at 2914.781 kb on + strand, within MPMX20_02758

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A
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2,911,362 + MPMX20_02756 0.59 -1.0
2,911,416 + MPMX20_02756 0.62 +1.3
2,911,419 - MPMX20_02756 0.62 -0.1
2,911,423 - MPMX20_02756 0.63 -0.5
2,911,497 + MPMX20_02756 0.67 +0.4
2,911,497 + MPMX20_02756 0.67 -0.4
2,911,505 - MPMX20_02756 0.67 +1.1
2,911,505 - MPMX20_02756 0.67 +0.2
2,911,505 - MPMX20_02756 0.67 +0.5
2,911,611 + MPMX20_02756 0.73 -1.1
2,911,611 + MPMX20_02756 0.73 +0.0
2,911,622 + MPMX20_02756 0.74 -0.4
2,911,676 - MPMX20_02756 0.76 +0.5
2,911,684 + MPMX20_02756 0.77 +0.0
2,911,718 + MPMX20_02756 0.79 +0.2
2,911,723 + MPMX20_02756 0.79 +0.1
2,911,726 - MPMX20_02756 0.79 +0.2
2,911,726 - MPMX20_02756 0.79 -0.5
2,911,732 + MPMX20_02756 0.80 -0.5
2,911,737 + MPMX20_02756 0.80 +0.5
2,911,745 - MPMX20_02756 0.80 +0.0
2,911,812 - MPMX20_02756 0.84 +0.8
2,911,976 - -1.2
2,911,979 + +0.5
2,912,009 - -0.2
2,912,017 + +0.9
2,912,053 - -0.2
2,912,053 - +0.2
2,912,053 - +0.5
2,912,355 - +1.8
2,912,355 - +0.3
2,912,355 - +2.2
2,912,357 - -0.4
2,912,357 - +1.5
2,912,357 - -1.0
2,912,377 - -2.4
2,912,395 + +0.9
2,912,395 + -0.1
2,912,403 - -0.3
2,912,403 - -0.3
2,912,403 - -0.7
2,912,442 + +0.2
2,912,562 - MPMX20_02757 0.15 -2.9
2,912,602 + MPMX20_02757 0.18 +1.5
2,912,770 + MPMX20_02757 0.29 -1.5
2,912,922 + MPMX20_02757 0.40 +1.8
2,912,951 - MPMX20_02757 0.42 -2.0
2,913,124 - MPMX20_02757 0.53 -1.2
2,913,130 + MPMX20_02757 0.54 +0.8
2,913,135 + MPMX20_02757 0.54 -1.5
2,913,254 + MPMX20_02757 0.62 -2.3
2,913,262 - MPMX20_02757 0.63 -0.5
2,913,296 + MPMX20_02757 0.65 +1.8
2,913,355 - MPMX20_02757 0.69 -1.0
2,913,424 - MPMX20_02757 0.74 -1.9
2,913,535 + MPMX20_02757 0.81 +0.3
2,913,623 + MPMX20_02757 0.87 -1.3
2,913,672 - -1.5
2,913,785 + +0.8
2,913,793 - +1.1
2,913,793 - -1.3
2,913,834 + +0.5
2,913,834 + -1.1
2,913,878 - -1.9
2,913,883 - +0.3
2,913,888 - +1.3
2,913,888 - +0.1
2,913,893 - +0.8
2,913,912 + +0.0
2,913,920 - -1.0
2,914,019 + -0.3
2,914,020 - -0.2
2,914,062 + +0.7
2,914,063 + +0.0
2,914,068 + -0.1
2,914,076 - -1.3
2,914,076 - +0.2
2,914,102 - +0.4
2,914,153 - +0.8
2,914,159 + +0.4
2,914,199 + -0.6
2,914,268 + MPMX20_02758 0.13 +0.1
2,914,302 - MPMX20_02758 0.17 +0.9
2,914,447 - MPMX20_02758 0.33 -1.5
2,914,486 + MPMX20_02758 0.38 -1.6
2,914,491 + MPMX20_02758 0.38 -0.6
2,914,653 + MPMX20_02758 0.57 -0.1
2,914,675 - MPMX20_02758 0.59 +1.5
2,914,675 - MPMX20_02758 0.59 -0.2
2,914,711 - MPMX20_02758 0.63 +0.9
2,914,781 + MPMX20_02758 0.71 -0.3

Or see this region's nucleotide sequence