Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02511

Experiment: mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02510 and MPMX20_02511 overlap by 1 nucleotidesMPMX20_02511 and MPMX20_02512 are separated by 3 nucleotides MPMX20_02510: MPMX20_02510 - Anthranilate synthase component 1, at 2,651,313 to 2,652,875 _02510 MPMX20_02511: MPMX20_02511 - Bifunctional protein TrpGD, at 2,652,875 to 2,654,470 _02511 MPMX20_02512: MPMX20_02512 - Tryptophan biosynthesis protein TrpCF, at 2,654,474 to 2,655,832 _02512 Position (kb) 2652 2653 2654 2655Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 2651.887 kb on + strand, within MPMX20_02510at 2651.906 kb on - strand, within MPMX20_02510at 2651.908 kb on + strand, within MPMX20_02510at 2651.916 kb on - strand, within MPMX20_02510at 2651.944 kb on + strand, within MPMX20_02510at 2651.986 kb on - strand, within MPMX20_02510at 2651.988 kb on + strand, within MPMX20_02510at 2651.988 kb on - strand, within MPMX20_02510at 2652.011 kb on + strand, within MPMX20_02510at 2652.044 kb on + strand, within MPMX20_02510at 2652.051 kb on + strand, within MPMX20_02510at 2652.052 kb on - strand, within MPMX20_02510at 2652.059 kb on - strand, within MPMX20_02510at 2652.128 kb on + strand, within MPMX20_02510at 2652.136 kb on - strand, within MPMX20_02510at 2652.136 kb on - strand, within MPMX20_02510at 2652.150 kb on + strand, within MPMX20_02510at 2652.159 kb on - strand, within MPMX20_02510at 2652.170 kb on + strand, within MPMX20_02510at 2652.175 kb on + strand, within MPMX20_02510at 2652.175 kb on + strand, within MPMX20_02510at 2652.183 kb on - strand, within MPMX20_02510at 2652.183 kb on - strand, within MPMX20_02510at 2652.211 kb on + strand, within MPMX20_02510at 2652.221 kb on + strand, within MPMX20_02510at 2652.221 kb on + strand, within MPMX20_02510at 2652.229 kb on - strand, within MPMX20_02510at 2652.273 kb on + strand, within MPMX20_02510at 2652.295 kb on + strand, within MPMX20_02510at 2652.419 kb on - strand, within MPMX20_02510at 2652.426 kb on + strand, within MPMX20_02510at 2652.561 kb on + strand, within MPMX20_02510at 2652.569 kb on - strand, within MPMX20_02510at 2652.570 kb on + strand, within MPMX20_02510at 2652.584 kb on - strand, within MPMX20_02510at 2652.586 kb on + strand, within MPMX20_02510at 2652.620 kb on + strand, within MPMX20_02510at 2652.718 kb on + strand, within MPMX20_02510at 2652.791 kb on + strandat 2652.828 kb on + strandat 2652.866 kb on - strandat 2652.882 kb on + strandat 2652.909 kb on - strandat 2652.909 kb on - strandat 2652.909 kb on - strandat 2652.983 kb on + strandat 2653.026 kb on + strandat 2653.132 kb on - strand, within MPMX20_02511at 2653.133 kb on - strand, within MPMX20_02511at 2653.214 kb on - strand, within MPMX20_02511at 2653.251 kb on - strand, within MPMX20_02511at 2653.269 kb on + strand, within MPMX20_02511at 2653.333 kb on + strand, within MPMX20_02511at 2653.341 kb on - strand, within MPMX20_02511at 2653.435 kb on + strand, within MPMX20_02511at 2653.443 kb on - strand, within MPMX20_02511at 2653.448 kb on - strand, within MPMX20_02511at 2653.452 kb on + strand, within MPMX20_02511at 2653.452 kb on + strand, within MPMX20_02511at 2653.452 kb on + strand, within MPMX20_02511at 2653.460 kb on - strand, within MPMX20_02511at 2653.462 kb on + strand, within MPMX20_02511at 2653.462 kb on + strand, within MPMX20_02511at 2653.470 kb on + strand, within MPMX20_02511at 2653.470 kb on + strand, within MPMX20_02511at 2653.470 kb on - strand, within MPMX20_02511at 2653.470 kb on - strand, within MPMX20_02511at 2653.470 kb on - strand, within MPMX20_02511at 2653.507 kb on + strand, within MPMX20_02511at 2653.561 kb on + strand, within MPMX20_02511at 2653.561 kb on + strand, within MPMX20_02511at 2653.561 kb on + strand, within MPMX20_02511at 2653.569 kb on - strand, within MPMX20_02511at 2653.611 kb on + strand, within MPMX20_02511at 2653.795 kb on + strand, within MPMX20_02511at 2653.827 kb on + strand, within MPMX20_02511at 2653.827 kb on + strand, within MPMX20_02511at 2653.878 kb on - strand, within MPMX20_02511at 2653.889 kb on + strand, within MPMX20_02511at 2653.889 kb on + strand, within MPMX20_02511at 2653.889 kb on + strand, within MPMX20_02511at 2653.889 kb on + strand, within MPMX20_02511at 2653.897 kb on - strand, within MPMX20_02511at 2653.907 kb on - strand, within MPMX20_02511at 2654.041 kb on + strand, within MPMX20_02511at 2654.049 kb on - strand, within MPMX20_02511at 2654.165 kb on - strand, within MPMX20_02511at 2654.293 kb on - strand, within MPMX20_02511at 2654.349 kb on + strandat 2654.371 kb on - strandat 2654.373 kb on + strandat 2654.391 kb on - strandat 2654.419 kb on + strandat 2654.427 kb on - strandat 2654.432 kb on + strandat 2654.432 kb on + strandat 2654.466 kb on + strandat 2654.570 kb on + strandat 2654.570 kb on + strandat 2654.578 kb on - strandat 2654.632 kb on + strand, within MPMX20_02512at 2654.665 kb on - strand, within MPMX20_02512at 2654.732 kb on - strand, within MPMX20_02512at 2654.799 kb on + strand, within MPMX20_02512at 2654.807 kb on - strand, within MPMX20_02512at 2654.807 kb on - strand, within MPMX20_02512at 2654.807 kb on - strand, within MPMX20_02512at 2654.861 kb on - strand, within MPMX20_02512at 2654.872 kb on - strand, within MPMX20_02512at 2654.937 kb on + strand, within MPMX20_02512at 2654.945 kb on - strand, within MPMX20_02512at 2654.973 kb on - strand, within MPMX20_02512at 2655.035 kb on - strand, within MPMX20_02512at 2655.048 kb on + strand, within MPMX20_02512at 2655.061 kb on - strand, within MPMX20_02512at 2655.090 kb on + strand, within MPMX20_02512at 2655.132 kb on + strand, within MPMX20_02512at 2655.142 kb on - strand, within MPMX20_02512at 2655.155 kb on - strand, within MPMX20_02512at 2655.284 kb on - strand, within MPMX20_02512at 2655.327 kb on + strand, within MPMX20_02512at 2655.335 kb on - strand, within MPMX20_02512at 2655.393 kb on + strand, within MPMX20_02512at 2655.469 kb on + strand, within MPMX20_02512

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in R2A
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2,651,887 + MPMX20_02510 0.37 -0.7
2,651,906 - MPMX20_02510 0.38 -0.5
2,651,908 + MPMX20_02510 0.38 -0.6
2,651,916 - MPMX20_02510 0.39 -0.5
2,651,944 + MPMX20_02510 0.40 -0.9
2,651,986 - MPMX20_02510 0.43 -0.9
2,651,988 + MPMX20_02510 0.43 -2.7
2,651,988 - MPMX20_02510 0.43 -1.0
2,652,011 + MPMX20_02510 0.45 -1.0
2,652,044 + MPMX20_02510 0.47 -1.5
2,652,051 + MPMX20_02510 0.47 -2.2
2,652,052 - MPMX20_02510 0.47 -1.6
2,652,059 - MPMX20_02510 0.48 -1.5
2,652,128 + MPMX20_02510 0.52 -0.3
2,652,136 - MPMX20_02510 0.53 -0.9
2,652,136 - MPMX20_02510 0.53 -4.0
2,652,150 + MPMX20_02510 0.54 -2.0
2,652,159 - MPMX20_02510 0.54 -0.5
2,652,170 + MPMX20_02510 0.55 -1.3
2,652,175 + MPMX20_02510 0.55 -0.2
2,652,175 + MPMX20_02510 0.55 -0.7
2,652,183 - MPMX20_02510 0.56 -0.4
2,652,183 - MPMX20_02510 0.56 -0.7
2,652,211 + MPMX20_02510 0.57 -0.2
2,652,221 + MPMX20_02510 0.58 -1.0
2,652,221 + MPMX20_02510 0.58 -0.4
2,652,229 - MPMX20_02510 0.59 -0.9
2,652,273 + MPMX20_02510 0.61 -0.2
2,652,295 + MPMX20_02510 0.63 -2.0
2,652,419 - MPMX20_02510 0.71 -2.1
2,652,426 + MPMX20_02510 0.71 +0.1
2,652,561 + MPMX20_02510 0.80 -0.5
2,652,569 - MPMX20_02510 0.80 -2.5
2,652,570 + MPMX20_02510 0.80 -0.9
2,652,584 - MPMX20_02510 0.81 -0.8
2,652,586 + MPMX20_02510 0.81 -0.3
2,652,620 + MPMX20_02510 0.84 +1.9
2,652,718 + MPMX20_02510 0.90 -0.9
2,652,791 + -1.0
2,652,828 + -1.7
2,652,866 - -2.2
2,652,882 + -1.2
2,652,909 - -0.7
2,652,909 - -1.1
2,652,909 - -1.4
2,652,983 + -2.6
2,653,026 + -1.8
2,653,132 - MPMX20_02511 0.16 -0.4
2,653,133 - MPMX20_02511 0.16 -0.8
2,653,214 - MPMX20_02511 0.21 +0.3
2,653,251 - MPMX20_02511 0.24 +0.9
2,653,269 + MPMX20_02511 0.25 -1.6
2,653,333 + MPMX20_02511 0.29 -2.5
2,653,341 - MPMX20_02511 0.29 -0.7
2,653,435 + MPMX20_02511 0.35 -0.8
2,653,443 - MPMX20_02511 0.36 -0.6
2,653,448 - MPMX20_02511 0.36 -1.7
2,653,452 + MPMX20_02511 0.36 -1.2
2,653,452 + MPMX20_02511 0.36 -1.6
2,653,452 + MPMX20_02511 0.36 -1.7
2,653,460 - MPMX20_02511 0.37 -2.8
2,653,462 + MPMX20_02511 0.37 -0.2
2,653,462 + MPMX20_02511 0.37 -0.6
2,653,470 + MPMX20_02511 0.37 -0.7
2,653,470 + MPMX20_02511 0.37 -2.6
2,653,470 - MPMX20_02511 0.37 -0.4
2,653,470 - MPMX20_02511 0.37 -0.5
2,653,470 - MPMX20_02511 0.37 -2.0
2,653,507 + MPMX20_02511 0.40 -1.4
2,653,561 + MPMX20_02511 0.43 -4.1
2,653,561 + MPMX20_02511 0.43 -1.7
2,653,561 + MPMX20_02511 0.43 -0.5
2,653,569 - MPMX20_02511 0.43 -1.8
2,653,611 + MPMX20_02511 0.46 -0.3
2,653,795 + MPMX20_02511 0.58 +3.9
2,653,827 + MPMX20_02511 0.60 -0.9
2,653,827 + MPMX20_02511 0.60 -0.6
2,653,878 - MPMX20_02511 0.63 -1.0
2,653,889 + MPMX20_02511 0.64 +0.8
2,653,889 + MPMX20_02511 0.64 -0.8
2,653,889 + MPMX20_02511 0.64 -2.3
2,653,889 + MPMX20_02511 0.64 +0.3
2,653,897 - MPMX20_02511 0.64 -1.1
2,653,907 - MPMX20_02511 0.65 -0.7
2,654,041 + MPMX20_02511 0.73 -1.0
2,654,049 - MPMX20_02511 0.74 -0.1
2,654,165 - MPMX20_02511 0.81 -0.3
2,654,293 - MPMX20_02511 0.89 -0.9
2,654,349 + -1.2
2,654,371 - +0.3
2,654,373 + -0.9
2,654,391 - +0.1
2,654,419 + +0.3
2,654,427 - -1.4
2,654,432 + -1.9
2,654,432 + -1.9
2,654,466 + -0.9
2,654,570 + -1.4
2,654,570 + -1.3
2,654,578 - -2.2
2,654,632 + MPMX20_02512 0.12 -0.9
2,654,665 - MPMX20_02512 0.14 +0.0
2,654,732 - MPMX20_02512 0.19 -1.0
2,654,799 + MPMX20_02512 0.24 -0.8
2,654,807 - MPMX20_02512 0.25 -1.5
2,654,807 - MPMX20_02512 0.25 -1.2
2,654,807 - MPMX20_02512 0.25 -1.3
2,654,861 - MPMX20_02512 0.28 -0.5
2,654,872 - MPMX20_02512 0.29 -1.1
2,654,937 + MPMX20_02512 0.34 +1.0
2,654,945 - MPMX20_02512 0.35 -0.9
2,654,973 - MPMX20_02512 0.37 -1.1
2,655,035 - MPMX20_02512 0.41 -0.6
2,655,048 + MPMX20_02512 0.42 -0.7
2,655,061 - MPMX20_02512 0.43 -3.0
2,655,090 + MPMX20_02512 0.45 -1.5
2,655,132 + MPMX20_02512 0.48 -1.2
2,655,142 - MPMX20_02512 0.49 -1.5
2,655,155 - MPMX20_02512 0.50 -0.5
2,655,284 - MPMX20_02512 0.60 -2.3
2,655,327 + MPMX20_02512 0.63 -1.9
2,655,335 - MPMX20_02512 0.63 +0.2
2,655,393 + MPMX20_02512 0.68 -0.7
2,655,469 + MPMX20_02512 0.73 -0.8

Or see this region's nucleotide sequence