Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS11380

Experiment: Anaerobic, pH5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic, pH5.5
2,411,509	-				-2.0
2,411,556	+				-3.2
2,411,556	+				+0.7
2,411,556	+				-2.0
2,411,665	-				-2.8
2,411,799	+		ABCV34_RS11385	0.17	-2.6
2,411,800	-		ABCV34_RS11385	0.17	-1.9
2,411,848	-		ABCV34_RS11385	0.19	-1.6
2,411,877	+		ABCV34_RS11385	0.21	-3.4
2,411,877	+		ABCV34_RS11385	0.21	-2.9
2,411,878	-		ABCV34_RS11385	0.21	-1.9
2,411,878	-		ABCV34_RS11385	0.21	-3.7
2,411,892	-		ABCV34_RS11385	0.22	-2.3
2,411,892	-		ABCV34_RS11385	0.22	-2.8
2,412,021	+		ABCV34_RS11385	0.28	-2.5
2,412,022	-		ABCV34_RS11385	0.28	-2.7
2,412,022	-		ABCV34_RS11385	0.28	-3.2
2,412,022	-		ABCV34_RS11385	0.28	-2.3
2,412,078	+		ABCV34_RS11385	0.31	-3.7
2,412,079	-		ABCV34_RS11385	0.31	-3.5
2,412,105	+		ABCV34_RS11385	0.33	-2.8
2,412,106	-		ABCV34_RS11385	0.33	-3.1
2,412,110	+		ABCV34_RS11385	0.33	-2.2
2,412,111	-		ABCV34_RS11385	0.33	-2.5