Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02165

Experiment: mutant library grown in Supernatant; Achromobacter sp. TBS_048 grown in R2A

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02163 and MPMX20_02164 are separated by 96 nucleotidesMPMX20_02164 and MPMX20_02165 are separated by 36 nucleotidesMPMX20_02165 and MPMX20_02166 are separated by 99 nucleotides MPMX20_02163: MPMX20_02163 - putative oxidoreductase, at 2,257,188 to 2,258,006 _02163 MPMX20_02164: MPMX20_02164 - HTH-type transcriptional regulator ZntR, at 2,258,103 to 2,258,471 _02164 MPMX20_02165: MPMX20_02165 - HTH-type transcriptional regulator DmlR, at 2,258,508 to 2,259,443 _02165 MPMX20_02166: MPMX20_02166 - N-ethylmaleimide reductase, at 2,259,543 to 2,260,655 _02166 Position (kb) 2258 2259 2260Strain fitness (log2 ratio) -2 -1 0 1at 2257.570 kb on + strand, within MPMX20_02163at 2257.579 kb on + strand, within MPMX20_02163at 2257.660 kb on + strand, within MPMX20_02163at 2257.668 kb on - strand, within MPMX20_02163at 2257.668 kb on - strand, within MPMX20_02163at 2257.716 kb on + strand, within MPMX20_02163at 2257.770 kb on - strand, within MPMX20_02163at 2257.792 kb on + strand, within MPMX20_02163at 2257.810 kb on - strand, within MPMX20_02163at 2257.829 kb on + strand, within MPMX20_02163at 2257.829 kb on + strand, within MPMX20_02163at 2257.829 kb on + strand, within MPMX20_02163at 2257.829 kb on + strand, within MPMX20_02163at 2257.829 kb on + strand, within MPMX20_02163at 2257.837 kb on - strand, within MPMX20_02163at 2257.837 kb on - strand, within MPMX20_02163at 2257.837 kb on - strand, within MPMX20_02163at 2258.037 kb on + strandat 2258.051 kb on - strandat 2258.069 kb on - strandat 2258.167 kb on + strand, within MPMX20_02164at 2258.229 kb on + strand, within MPMX20_02164at 2258.245 kb on + strand, within MPMX20_02164at 2258.260 kb on - strand, within MPMX20_02164at 2258.278 kb on + strand, within MPMX20_02164at 2258.278 kb on + strand, within MPMX20_02164at 2258.286 kb on - strand, within MPMX20_02164at 2258.286 kb on - strand, within MPMX20_02164at 2258.416 kb on - strand, within MPMX20_02164at 2258.450 kb on + strandat 2258.506 kb on - strandat 2258.588 kb on + strandat 2258.653 kb on - strand, within MPMX20_02165at 2258.849 kb on + strand, within MPMX20_02165at 2258.873 kb on + strand, within MPMX20_02165at 2258.905 kb on - strand, within MPMX20_02165at 2258.911 kb on + strand, within MPMX20_02165at 2258.911 kb on + strand, within MPMX20_02165at 2258.992 kb on - strand, within MPMX20_02165at 2259.018 kb on + strand, within MPMX20_02165at 2259.026 kb on - strand, within MPMX20_02165at 2259.140 kb on + strand, within MPMX20_02165at 2259.282 kb on - strand, within MPMX20_02165at 2259.328 kb on + strand, within MPMX20_02165at 2259.377 kb on - strandat 2259.426 kb on + strandat 2259.526 kb on + strandat 2259.544 kb on - strandat 2259.569 kb on + strandat 2259.569 kb on + strandat 2259.587 kb on - strandat 2259.737 kb on + strand, within MPMX20_02166at 2259.743 kb on + strand, within MPMX20_02166at 2259.746 kb on - strand, within MPMX20_02166at 2259.746 kb on - strand, within MPMX20_02166at 2259.775 kb on - strand, within MPMX20_02166at 2259.780 kb on - strand, within MPMX20_02166at 2259.845 kb on + strand, within MPMX20_02166at 2259.845 kb on + strand, within MPMX20_02166at 2259.984 kb on - strand, within MPMX20_02166at 2260.018 kb on + strand, within MPMX20_02166at 2260.080 kb on - strand, within MPMX20_02166at 2260.086 kb on + strand, within MPMX20_02166at 2260.143 kb on + strand, within MPMX20_02166at 2260.183 kb on + strand, within MPMX20_02166at 2260.185 kb on - strand, within MPMX20_02166at 2260.206 kb on + strand, within MPMX20_02166at 2260.227 kb on - strand, within MPMX20_02166at 2260.252 kb on + strand, within MPMX20_02166at 2260.283 kb on + strand, within MPMX20_02166at 2260.312 kb on + strand, within MPMX20_02166at 2260.313 kb on - strand, within MPMX20_02166at 2260.358 kb on - strand, within MPMX20_02166

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Achromobacter sp. TBS_048 grown in R2A
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2,257,570 + MPMX20_02163 0.47 -2.4
2,257,579 + MPMX20_02163 0.48 +0.6
2,257,660 + MPMX20_02163 0.58 -0.9
2,257,668 - MPMX20_02163 0.59 -0.4
2,257,668 - MPMX20_02163 0.59 +0.2
2,257,716 + MPMX20_02163 0.64 -0.7
2,257,770 - MPMX20_02163 0.71 -0.2
2,257,792 + MPMX20_02163 0.74 -0.0
2,257,810 - MPMX20_02163 0.76 -0.6
2,257,829 + MPMX20_02163 0.78 -0.5
2,257,829 + MPMX20_02163 0.78 -0.4
2,257,829 + MPMX20_02163 0.78 -0.3
2,257,829 + MPMX20_02163 0.78 -0.2
2,257,829 + MPMX20_02163 0.78 +1.0
2,257,837 - MPMX20_02163 0.79 -0.1
2,257,837 - MPMX20_02163 0.79 -0.1
2,257,837 - MPMX20_02163 0.79 +0.3
2,258,037 + -0.5
2,258,051 - +0.3
2,258,069 - -0.1
2,258,167 + MPMX20_02164 0.17 +0.8
2,258,229 + MPMX20_02164 0.34 -0.3
2,258,245 + MPMX20_02164 0.38 -0.5
2,258,260 - MPMX20_02164 0.43 -2.1
2,258,278 + MPMX20_02164 0.47 +1.4
2,258,278 + MPMX20_02164 0.47 +0.8
2,258,286 - MPMX20_02164 0.50 -0.8
2,258,286 - MPMX20_02164 0.50 -0.1
2,258,416 - MPMX20_02164 0.85 +0.2
2,258,450 + +0.4
2,258,506 - +0.8
2,258,588 + +0.6
2,258,653 - MPMX20_02165 0.15 +0.4
2,258,849 + MPMX20_02165 0.36 +0.4
2,258,873 + MPMX20_02165 0.39 -0.2
2,258,905 - MPMX20_02165 0.42 -1.9
2,258,911 + MPMX20_02165 0.43 +0.4
2,258,911 + MPMX20_02165 0.43 -0.1
2,258,992 - MPMX20_02165 0.52 +1.0
2,259,018 + MPMX20_02165 0.54 -0.2
2,259,026 - MPMX20_02165 0.55 +0.5
2,259,140 + MPMX20_02165 0.68 +1.1
2,259,282 - MPMX20_02165 0.83 +0.3
2,259,328 + MPMX20_02165 0.88 +1.3
2,259,377 - +0.7
2,259,426 + +0.3
2,259,526 + -0.8
2,259,544 - -1.9
2,259,569 + -0.9
2,259,569 + -0.9
2,259,587 - -1.2
2,259,737 + MPMX20_02166 0.17 -0.5
2,259,743 + MPMX20_02166 0.18 -1.3
2,259,746 - MPMX20_02166 0.18 -0.7
2,259,746 - MPMX20_02166 0.18 -1.7
2,259,775 - MPMX20_02166 0.21 -0.7
2,259,780 - MPMX20_02166 0.21 -0.4
2,259,845 + MPMX20_02166 0.27 +1.1
2,259,845 + MPMX20_02166 0.27 +1.0
2,259,984 - MPMX20_02166 0.40 +0.7
2,260,018 + MPMX20_02166 0.43 -0.2
2,260,080 - MPMX20_02166 0.48 +0.0
2,260,086 + MPMX20_02166 0.49 +0.7
2,260,143 + MPMX20_02166 0.54 +0.5
2,260,183 + MPMX20_02166 0.58 +0.3
2,260,185 - MPMX20_02166 0.58 -0.0
2,260,206 + MPMX20_02166 0.60 +0.8
2,260,227 - MPMX20_02166 0.61 +0.0
2,260,252 + MPMX20_02166 0.64 -0.5
2,260,283 + MPMX20_02166 0.66 -0.4
2,260,312 + MPMX20_02166 0.69 -0.1
2,260,313 - MPMX20_02166 0.69 -0.4
2,260,358 - MPMX20_02166 0.73 -0.2

Or see this region's nucleotide sequence