Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04627

Experiment: mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04626 and MPMX20_04627 are separated by 100 nucleotidesMPMX20_04627 and MPMX20_04628 are separated by 616 nucleotides MPMX20_04626: MPMX20_04626 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 4,845,673 to 4,847,562 _04626 MPMX20_04627: MPMX20_04627 - Ribosomal RNA small subunit methyltransferase G, at 4,847,663 to 4,848,286 _04627 MPMX20_04628: MPMX20_04628 - ATP synthase protein I, at 4,848,903 to 4,849,283 _04628 Position (kb) 4847 4848 4849Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4846.767 kb on + strand, within MPMX20_04626at 4846.803 kb on + strand, within MPMX20_04626at 4846.869 kb on + strand, within MPMX20_04626at 4847.043 kb on + strand, within MPMX20_04626at 4847.060 kb on + strand, within MPMX20_04626at 4847.101 kb on + strand, within MPMX20_04626at 4847.216 kb on + strand, within MPMX20_04626at 4847.327 kb on - strand, within MPMX20_04626at 4847.407 kb on - strandat 4847.453 kb on + strandat 4847.458 kb on + strandat 4847.503 kb on - strandat 4847.750 kb on + strand, within MPMX20_04627at 4847.787 kb on - strand, within MPMX20_04627at 4847.789 kb on + strand, within MPMX20_04627at 4847.817 kb on + strand, within MPMX20_04627at 4847.885 kb on + strand, within MPMX20_04627at 4847.885 kb on + strand, within MPMX20_04627at 4847.885 kb on + strand, within MPMX20_04627at 4847.886 kb on + strand, within MPMX20_04627at 4847.886 kb on + strand, within MPMX20_04627at 4847.886 kb on + strand, within MPMX20_04627at 4847.893 kb on - strand, within MPMX20_04627at 4847.894 kb on - strand, within MPMX20_04627at 4847.894 kb on - strand, within MPMX20_04627at 4847.894 kb on - strand, within MPMX20_04627at 4847.952 kb on + strand, within MPMX20_04627at 4848.015 kb on + strand, within MPMX20_04627at 4848.015 kb on + strand, within MPMX20_04627at 4848.015 kb on + strand, within MPMX20_04627at 4848.020 kb on + strand, within MPMX20_04627at 4848.020 kb on + strand, within MPMX20_04627at 4848.020 kb on + strand, within MPMX20_04627at 4848.023 kb on - strand, within MPMX20_04627at 4848.025 kb on + strand, within MPMX20_04627at 4848.025 kb on + strand, within MPMX20_04627at 4848.025 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.028 kb on - strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.030 kb on + strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.033 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.038 kb on - strand, within MPMX20_04627at 4848.053 kb on - strand, within MPMX20_04627at 4848.068 kb on + strand, within MPMX20_04627at 4848.068 kb on + strand, within MPMX20_04627at 4848.068 kb on + strand, within MPMX20_04627at 4848.076 kb on - strand, within MPMX20_04627at 4848.076 kb on - strand, within MPMX20_04627at 4848.118 kb on + strand, within MPMX20_04627at 4848.119 kb on - strand, within MPMX20_04627at 4848.119 kb on - strand, within MPMX20_04627at 4848.126 kb on - strand, within MPMX20_04627at 4848.221 kb on + strand, within MPMX20_04627at 4848.238 kb on + strandat 4848.238 kb on + strandat 4848.238 kb on + strandat 4848.238 kb on + strandat 4848.244 kb on + strandat 4848.246 kb on - strandat 4848.246 kb on - strandat 4848.253 kb on - strandat 4848.253 kb on - strandat 4848.259 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.317 kb on + strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.325 kb on - strandat 4848.366 kb on + strandat 4848.374 kb on + strandat 4848.374 kb on - strandat 4848.382 kb on - strandat 4848.406 kb on + strandat 4848.415 kb on + strandat 4848.415 kb on + strandat 4848.433 kb on + strandat 4848.616 kb on + strandat 4848.616 kb on + strandat 4848.616 kb on + strandat 4848.652 kb on + strandat 4848.684 kb on + strandat 4848.684 kb on + strandat 4848.684 kb on + strandat 4848.691 kb on + strandat 4848.691 kb on + strandat 4848.692 kb on - strandat 4848.692 kb on - strandat 4848.692 kb on - strandat 4848.692 kb on - strandat 4848.711 kb on - strandat 4848.804 kb on - strandat 4848.829 kb on + strandat 4848.834 kb on + strandat 4848.834 kb on + strandat 4848.835 kb on + strandat 4848.874 kb on + strandat 4848.941 kb on + strand, within MPMX20_04628at 4848.962 kb on + strand, within MPMX20_04628at 4849.152 kb on + strand, within MPMX20_04628at 4849.248 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Variovorax sp. TBS_050B grown in LB
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4,846,767 + MPMX20_04626 0.58 +0.1
4,846,803 + MPMX20_04626 0.60 -0.9
4,846,869 + MPMX20_04626 0.63 +2.0
4,847,043 + MPMX20_04626 0.72 +0.2
4,847,060 + MPMX20_04626 0.73 -0.8
4,847,101 + MPMX20_04626 0.76 +1.8
4,847,216 + MPMX20_04626 0.82 -0.6
4,847,327 - MPMX20_04626 0.88 +2.4
4,847,407 - +0.2
4,847,453 + -0.2
4,847,458 + +0.8
4,847,503 - -0.2
4,847,750 + MPMX20_04627 0.14 -0.8
4,847,787 - MPMX20_04627 0.20 -0.1
4,847,789 + MPMX20_04627 0.20 -1.3
4,847,817 + MPMX20_04627 0.25 -1.2
4,847,885 + MPMX20_04627 0.36 +1.1
4,847,885 + MPMX20_04627 0.36 +0.2
4,847,885 + MPMX20_04627 0.36 +0.5
4,847,886 + MPMX20_04627 0.36 -0.2
4,847,886 + MPMX20_04627 0.36 +0.1
4,847,886 + MPMX20_04627 0.36 -1.3
4,847,893 - MPMX20_04627 0.37 +1.1
4,847,894 - MPMX20_04627 0.37 +0.4
4,847,894 - MPMX20_04627 0.37 +0.7
4,847,894 - MPMX20_04627 0.37 +0.2
4,847,952 + MPMX20_04627 0.46 +0.4
4,848,015 + MPMX20_04627 0.56 -0.8
4,848,015 + MPMX20_04627 0.56 +0.7
4,848,015 + MPMX20_04627 0.56 +0.4
4,848,020 + MPMX20_04627 0.57 -0.2
4,848,020 + MPMX20_04627 0.57 +0.8
4,848,020 + MPMX20_04627 0.57 -0.3
4,848,023 - MPMX20_04627 0.58 +0.6
4,848,025 + MPMX20_04627 0.58 -1.0
4,848,025 + MPMX20_04627 0.58 -1.3
4,848,025 - MPMX20_04627 0.58 +1.2
4,848,028 - MPMX20_04627 0.58 +1.4
4,848,028 - MPMX20_04627 0.58 -0.7
4,848,028 - MPMX20_04627 0.58 -0.6
4,848,028 - MPMX20_04627 0.58 +0.2
4,848,030 + MPMX20_04627 0.59 -0.8
4,848,030 + MPMX20_04627 0.59 +1.1
4,848,030 + MPMX20_04627 0.59 +0.8
4,848,030 + MPMX20_04627 0.59 +0.4
4,848,030 + MPMX20_04627 0.59 +0.9
4,848,030 + MPMX20_04627 0.59 -0.8
4,848,030 + MPMX20_04627 0.59 +0.7
4,848,030 + MPMX20_04627 0.59 +0.0
4,848,030 + MPMX20_04627 0.59 +0.1
4,848,030 + MPMX20_04627 0.59 +0.3
4,848,030 + MPMX20_04627 0.59 +0.6
4,848,030 + MPMX20_04627 0.59 -0.8
4,848,033 - MPMX20_04627 0.59 -0.3
4,848,033 - MPMX20_04627 0.59 +0.6
4,848,033 - MPMX20_04627 0.59 -0.0
4,848,033 - MPMX20_04627 0.59 +1.0
4,848,033 - MPMX20_04627 0.59 +0.6
4,848,033 - MPMX20_04627 0.59 -0.8
4,848,038 - MPMX20_04627 0.60 -0.3
4,848,038 - MPMX20_04627 0.60 +0.8
4,848,038 - MPMX20_04627 0.60 +0.4
4,848,038 - MPMX20_04627 0.60 -0.3
4,848,038 - MPMX20_04627 0.60 -0.2
4,848,038 - MPMX20_04627 0.60 +0.7
4,848,038 - MPMX20_04627 0.60 +0.9
4,848,053 - MPMX20_04627 0.62 -2.3
4,848,068 + MPMX20_04627 0.65 +0.1
4,848,068 + MPMX20_04627 0.65 +1.1
4,848,068 + MPMX20_04627 0.65 +0.0
4,848,076 - MPMX20_04627 0.66 +1.3
4,848,076 - MPMX20_04627 0.66 +0.1
4,848,118 + MPMX20_04627 0.73 +0.5
4,848,119 - MPMX20_04627 0.73 +0.2
4,848,119 - MPMX20_04627 0.73 -1.0
4,848,126 - MPMX20_04627 0.74 +1.3
4,848,221 + MPMX20_04627 0.89 +1.2
4,848,238 + -0.4
4,848,238 + +0.2
4,848,238 + +0.1
4,848,238 + +1.0
4,848,244 + -0.5
4,848,246 - +1.1
4,848,246 - +0.5
4,848,253 - +1.2
4,848,253 - -0.3
4,848,259 + +1.8
4,848,317 + -0.2
4,848,317 + -0.4
4,848,317 + +0.2
4,848,317 + +0.1
4,848,317 + -0.4
4,848,317 + -0.5
4,848,317 + -0.4
4,848,317 + +0.5
4,848,317 + +0.4
4,848,317 + +0.2
4,848,317 + +0.3
4,848,317 + +0.8
4,848,317 + +0.1
4,848,317 + +0.7
4,848,325 - -0.5
4,848,325 - -1.4
4,848,325 - -0.3
4,848,325 - +0.6
4,848,325 - -0.6
4,848,325 - -0.2
4,848,366 + -0.8
4,848,374 + +0.5
4,848,374 - +0.2
4,848,382 - -2.2
4,848,406 + -0.4
4,848,415 + -0.1
4,848,415 + +1.6
4,848,433 + -1.2
4,848,616 + -0.4
4,848,616 + +0.1
4,848,616 + -0.4
4,848,652 + +0.1
4,848,684 + -0.6
4,848,684 + +0.6
4,848,684 + +0.6
4,848,691 + +2.8
4,848,691 + +0.5
4,848,692 - -0.2
4,848,692 - -0.2
4,848,692 - +0.5
4,848,692 - +0.7
4,848,711 - -0.1
4,848,804 - +1.8
4,848,829 + -1.3
4,848,834 + +0.1
4,848,834 + -1.2
4,848,835 + -0.3
4,848,874 + -1.6
4,848,941 + MPMX20_04628 0.10 +1.0
4,848,962 + MPMX20_04628 0.15 -0.1
4,849,152 + MPMX20_04628 0.65 +1.1
4,849,248 + -2.1

Or see this region's nucleotide sequence