Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04309 and MPMX20_04310 are separated by 88 nucleotides MPMX20_04310 and MPMX20_04311 are separated by 18 nucleotides
MPMX20_04309: MPMX20_04309 - Aerobic glycerol-3-phosphate dehydrogenase, at 4,498,380 to 4,499,888
_04309
MPMX20_04310: MPMX20_04310 - Maltodextrin phosphorylase, at 4,499,977 to 4,502,424
_04310
MPMX20_04311: MPMX20_04311 - Glycogen synthase, at 4,502,443 to 4,503,876
_04311
Position (kb)
4499
4500
4501
4502
4503 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4498.989 kb on - strand, within MPMX20_04309 at 4499.005 kb on + strand, within MPMX20_04309 at 4499.061 kb on - strand, within MPMX20_04309 at 4499.113 kb on + strand, within MPMX20_04309 at 4499.119 kb on - strand, within MPMX20_04309 at 4499.119 kb on - strand, within MPMX20_04309 at 4499.171 kb on + strand, within MPMX20_04309 at 4499.201 kb on + strand, within MPMX20_04309 at 4499.201 kb on + strand, within MPMX20_04309 at 4499.201 kb on + strand, within MPMX20_04309 at 4499.209 kb on - strand, within MPMX20_04309 at 4499.209 kb on - strand, within MPMX20_04309 at 4499.246 kb on - strand, within MPMX20_04309 at 4499.314 kb on - strand, within MPMX20_04309 at 4499.317 kb on + strand, within MPMX20_04309 at 4499.407 kb on + strand, within MPMX20_04309 at 4499.449 kb on - strand, within MPMX20_04309 at 4499.452 kb on + strand, within MPMX20_04309 at 4499.460 kb on - strand, within MPMX20_04309 at 4499.518 kb on + strand, within MPMX20_04309 at 4499.527 kb on - strand, within MPMX20_04309 at 4499.527 kb on - strand, within MPMX20_04309 at 4499.668 kb on - strand, within MPMX20_04309 at 4499.717 kb on + strand, within MPMX20_04309 at 4499.737 kb on + strand, within MPMX20_04309 at 4499.873 kb on + strand at 4499.916 kb on + strand at 4499.929 kb on - strand at 4499.938 kb on + strand at 4500.080 kb on - strand at 4500.119 kb on - strand at 4500.128 kb on - strand at 4500.176 kb on + strand at 4500.209 kb on + strand at 4500.219 kb on + strand at 4500.263 kb on - strand, within MPMX20_04310 at 4500.299 kb on + strand, within MPMX20_04310 at 4500.329 kb on - strand, within MPMX20_04310 at 4500.338 kb on - strand, within MPMX20_04310 at 4500.365 kb on + strand, within MPMX20_04310 at 4500.373 kb on - strand, within MPMX20_04310 at 4500.390 kb on + strand, within MPMX20_04310 at 4500.462 kb on + strand, within MPMX20_04310 at 4500.486 kb on + strand, within MPMX20_04310 at 4500.645 kb on - strand, within MPMX20_04310 at 4500.712 kb on - strand, within MPMX20_04310 at 4500.712 kb on - strand, within MPMX20_04310 at 4500.721 kb on - strand, within MPMX20_04310 at 4500.721 kb on - strand, within MPMX20_04310 at 4500.828 kb on + strand, within MPMX20_04310 at 4500.881 kb on + strand, within MPMX20_04310 at 4500.881 kb on + strand, within MPMX20_04310 at 4500.889 kb on - strand, within MPMX20_04310 at 4500.920 kb on - strand, within MPMX20_04310 at 4500.920 kb on - strand, within MPMX20_04310 at 4500.920 kb on - strand, within MPMX20_04310 at 4500.932 kb on + strand, within MPMX20_04310 at 4501.025 kb on - strand, within MPMX20_04310 at 4501.052 kb on + strand, within MPMX20_04310 at 4501.095 kb on + strand, within MPMX20_04310 at 4501.143 kb on + strand, within MPMX20_04310 at 4501.201 kb on + strand, within MPMX20_04310 at 4501.209 kb on - strand, within MPMX20_04310 at 4501.278 kb on - strand, within MPMX20_04310 at 4501.344 kb on + strand, within MPMX20_04310 at 4501.352 kb on - strand, within MPMX20_04310 at 4501.455 kb on + strand, within MPMX20_04310 at 4501.462 kb on - strand, within MPMX20_04310 at 4501.526 kb on + strand, within MPMX20_04310 at 4501.528 kb on + strand, within MPMX20_04310 at 4501.537 kb on + strand, within MPMX20_04310 at 4501.545 kb on - strand, within MPMX20_04310 at 4501.559 kb on + strand, within MPMX20_04310 at 4501.608 kb on + strand, within MPMX20_04310 at 4501.616 kb on - strand, within MPMX20_04310 at 4501.644 kb on + strand, within MPMX20_04310 at 4501.711 kb on + strand, within MPMX20_04310 at 4501.714 kb on - strand, within MPMX20_04310 at 4501.731 kb on - strand, within MPMX20_04310 at 4501.742 kb on - strand, within MPMX20_04310 at 4501.811 kb on - strand, within MPMX20_04310 at 4501.811 kb on - strand, within MPMX20_04310 at 4501.908 kb on - strand, within MPMX20_04310 at 4501.910 kb on - strand, within MPMX20_04310 at 4501.967 kb on - strand, within MPMX20_04310 at 4502.059 kb on + strand, within MPMX20_04310 at 4502.062 kb on - strand, within MPMX20_04310 at 4502.064 kb on + strand, within MPMX20_04310 at 4502.101 kb on + strand, within MPMX20_04310 at 4502.126 kb on + strand, within MPMX20_04310 at 4502.170 kb on - strand, within MPMX20_04310 at 4502.170 kb on - strand, within MPMX20_04310 at 4502.170 kb on - strand, within MPMX20_04310 at 4502.204 kb on + strand at 4502.261 kb on - strand at 4502.294 kb on + strand at 4502.360 kb on - strand at 4502.379 kb on + strand at 4502.476 kb on - strand at 4502.602 kb on - strand, within MPMX20_04311 at 4502.649 kb on - strand, within MPMX20_04311 at 4502.674 kb on - strand, within MPMX20_04311 at 4502.674 kb on - strand, within MPMX20_04311 at 4502.728 kb on - strand, within MPMX20_04311 at 4502.730 kb on + strand, within MPMX20_04311 at 4502.780 kb on - strand, within MPMX20_04311 at 4502.780 kb on - strand, within MPMX20_04311 at 4502.805 kb on - strand, within MPMX20_04311 at 4502.828 kb on - strand, within MPMX20_04311 at 4502.885 kb on - strand, within MPMX20_04311 at 4502.899 kb on - strand, within MPMX20_04311 at 4502.929 kb on + strand, within MPMX20_04311 at 4503.015 kb on + strand, within MPMX20_04311 at 4503.015 kb on + strand, within MPMX20_04311 at 4503.023 kb on - strand, within MPMX20_04311 at 4503.023 kb on - strand, within MPMX20_04311 at 4503.149 kb on + strand, within MPMX20_04311 at 4503.160 kb on + strand, within MPMX20_04311 at 4503.244 kb on - strand, within MPMX20_04311 at 4503.261 kb on - strand, within MPMX20_04311 at 4503.263 kb on + strand, within MPMX20_04311 at 4503.263 kb on + strand, within MPMX20_04311 at 4503.306 kb on + strand, within MPMX20_04311 at 4503.399 kb on - strand, within MPMX20_04311
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 4,498,989 - MPMX20_04309 0.40 -0.0 4,499,005 + MPMX20_04309 0.41 -0.3 4,499,061 - MPMX20_04309 0.45 +0.6 4,499,113 + MPMX20_04309 0.49 -1.1 4,499,119 - MPMX20_04309 0.49 -0.2 4,499,119 - MPMX20_04309 0.49 +0.4 4,499,171 + MPMX20_04309 0.52 +0.1 4,499,201 + MPMX20_04309 0.54 +0.6 4,499,201 + MPMX20_04309 0.54 -0.9 4,499,201 + MPMX20_04309 0.54 -0.2 4,499,209 - MPMX20_04309 0.55 -2.3 4,499,209 - MPMX20_04309 0.55 +3.0 4,499,246 - MPMX20_04309 0.57 +0.6 4,499,314 - MPMX20_04309 0.62 +1.6 4,499,317 + MPMX20_04309 0.62 -0.2 4,499,407 + MPMX20_04309 0.68 +1.0 4,499,449 - MPMX20_04309 0.71 +1.3 4,499,452 + MPMX20_04309 0.71 -0.3 4,499,460 - MPMX20_04309 0.72 -0.8 4,499,518 + MPMX20_04309 0.75 -0.4 4,499,527 - MPMX20_04309 0.76 -0.1 4,499,527 - MPMX20_04309 0.76 -2.2 4,499,668 - MPMX20_04309 0.85 +2.8 4,499,717 + MPMX20_04309 0.89 +0.4 4,499,737 + MPMX20_04309 0.90 +0.5 4,499,873 + +0.1 4,499,916 + -0.8 4,499,929 - +0.0 4,499,938 + -0.4 4,500,080 - +0.4 4,500,119 - +0.9 4,500,128 - -0.6 4,500,176 + -0.1 4,500,209 + -0.8 4,500,219 + -0.1 4,500,263 - MPMX20_04310 0.12 -1.8 4,500,299 + MPMX20_04310 0.13 +0.4 4,500,329 - MPMX20_04310 0.14 -0.2 4,500,338 - MPMX20_04310 0.15 +0.6 4,500,365 + MPMX20_04310 0.16 +0.4 4,500,373 - MPMX20_04310 0.16 -1.5 4,500,390 + MPMX20_04310 0.17 -0.3 4,500,462 + MPMX20_04310 0.20 -0.5 4,500,486 + MPMX20_04310 0.21 +0.9 4,500,645 - MPMX20_04310 0.27 +1.1 4,500,712 - MPMX20_04310 0.30 -0.6 4,500,712 - MPMX20_04310 0.30 +0.0 4,500,721 - MPMX20_04310 0.30 +0.1 4,500,721 - MPMX20_04310 0.30 +0.3 4,500,828 + MPMX20_04310 0.35 -0.5 4,500,881 + MPMX20_04310 0.37 -1.0 4,500,881 + MPMX20_04310 0.37 +0.4 4,500,889 - MPMX20_04310 0.37 -0.0 4,500,920 - MPMX20_04310 0.39 +0.2 4,500,920 - MPMX20_04310 0.39 -3.1 4,500,920 - MPMX20_04310 0.39 -0.3 4,500,932 + MPMX20_04310 0.39 -0.5 4,501,025 - MPMX20_04310 0.43 +0.2 4,501,052 + MPMX20_04310 0.44 -0.6 4,501,095 + MPMX20_04310 0.46 +0.1 4,501,143 + MPMX20_04310 0.48 -1.1 4,501,201 + MPMX20_04310 0.50 +1.2 4,501,209 - MPMX20_04310 0.50 -1.0 4,501,278 - MPMX20_04310 0.53 +1.3 4,501,344 + MPMX20_04310 0.56 +0.4 4,501,352 - MPMX20_04310 0.56 -0.4 4,501,455 + MPMX20_04310 0.60 -0.2 4,501,462 - MPMX20_04310 0.61 +0.6 4,501,526 + MPMX20_04310 0.63 -0.4 4,501,528 + MPMX20_04310 0.63 +0.4 4,501,537 + MPMX20_04310 0.64 -0.0 4,501,545 - MPMX20_04310 0.64 -0.9 4,501,559 + MPMX20_04310 0.65 -0.5 4,501,608 + MPMX20_04310 0.67 +0.8 4,501,616 - MPMX20_04310 0.67 +0.6 4,501,644 + MPMX20_04310 0.68 -0.1 4,501,711 + MPMX20_04310 0.71 +0.1 4,501,714 - MPMX20_04310 0.71 +2.0 4,501,731 - MPMX20_04310 0.72 +0.2 4,501,742 - MPMX20_04310 0.72 +0.1 4,501,811 - MPMX20_04310 0.75 +1.5 4,501,811 - MPMX20_04310 0.75 -0.0 4,501,908 - MPMX20_04310 0.79 +1.6 4,501,910 - MPMX20_04310 0.79 -0.4 4,501,967 - MPMX20_04310 0.81 -0.5 4,502,059 + MPMX20_04310 0.85 -0.4 4,502,062 - MPMX20_04310 0.85 -1.4 4,502,064 + MPMX20_04310 0.85 -0.9 4,502,101 + MPMX20_04310 0.87 -0.2 4,502,126 + MPMX20_04310 0.88 +0.6 4,502,170 - MPMX20_04310 0.90 -0.1 4,502,170 - MPMX20_04310 0.90 +1.6 4,502,170 - MPMX20_04310 0.90 -1.5 4,502,204 + -0.1 4,502,261 - -0.3 4,502,294 + -0.0 4,502,360 - -0.2 4,502,379 + +0.2 4,502,476 - -1.1 4,502,602 - MPMX20_04311 0.11 -2.0 4,502,649 - MPMX20_04311 0.14 -2.3 4,502,674 - MPMX20_04311 0.16 -2.1 4,502,674 - MPMX20_04311 0.16 -0.4 4,502,728 - MPMX20_04311 0.20 -0.7 4,502,730 + MPMX20_04311 0.20 -0.4 4,502,780 - MPMX20_04311 0.24 -1.4 4,502,780 - MPMX20_04311 0.24 -1.4 4,502,805 - MPMX20_04311 0.25 -1.2 4,502,828 - MPMX20_04311 0.27 -0.9 4,502,885 - MPMX20_04311 0.31 -0.7 4,502,899 - MPMX20_04311 0.32 -1.8 4,502,929 + MPMX20_04311 0.34 -0.3 4,503,015 + MPMX20_04311 0.40 +0.6 4,503,015 + MPMX20_04311 0.40 -0.5 4,503,023 - MPMX20_04311 0.40 -1.0 4,503,023 - MPMX20_04311 0.40 -1.7 4,503,149 + MPMX20_04311 0.49 -1.2 4,503,160 + MPMX20_04311 0.50 -1.1 4,503,244 - MPMX20_04311 0.56 -0.1 4,503,261 - MPMX20_04311 0.57 -3.2 4,503,263 + MPMX20_04311 0.57 -0.8 4,503,263 + MPMX20_04311 0.57 -1.1 4,503,306 + MPMX20_04311 0.60 -0.2 4,503,399 - MPMX20_04311 0.67 -0.3
Or see this region's nucleotide sequence