Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04200

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04197 and MPMX20_04198 are separated by 146 nucleotidesMPMX20_04198 and MPMX20_04199 are separated by 0 nucleotidesMPMX20_04199 and MPMX20_04200 are separated by 57 nucleotidesMPMX20_04200 and MPMX20_04201 are separated by 2 nucleotidesMPMX20_04201 and MPMX20_04202 are separated by 107 nucleotidesMPMX20_04202 and MPMX20_04203 are separated by 40 nucleotides MPMX20_04197: MPMX20_04197 - Trk system potassium uptake protein TrkA, at 4,399,238 to 4,400,614 _04197 MPMX20_04198: MPMX20_04198 - Large-conductance mechanosensitive channel, at 4,400,761 to 4,401,174 _04198 MPMX20_04199: MPMX20_04199 - Alternative ribosome-rescue factor A, at 4,401,175 to 4,401,390 _04199 MPMX20_04200: MPMX20_04200 - HTH-type transcriptional regulator ZntR, at 4,401,448 to 4,401,870 _04200 MPMX20_04201: MPMX20_04201 - hypothetical protein, at 4,401,873 to 4,402,241 _04201 MPMX20_04202: MPMX20_04202 - 50S ribosomal protein L17, at 4,402,349 to 4,402,735 _04202 MPMX20_04203: MPMX20_04203 - DNA-directed RNA polymerase subunit alpha, at 4,402,776 to 4,403,765 _04203 Position (kb) 4401 4402Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4400.462 kb on + strand, within MPMX20_04197at 4400.489 kb on + strandat 4400.490 kb on + strandat 4400.522 kb on + strandat 4400.540 kb on + strandat 4400.582 kb on + strandat 4400.597 kb on + strandat 4400.615 kb on + strandat 4400.617 kb on + strandat 4400.623 kb on - strandat 4400.625 kb on - strandat 4400.625 kb on - strandat 4400.626 kb on - strandat 4400.744 kb on + strandat 4400.752 kb on - strandat 4400.786 kb on + strandat 4400.794 kb on - strandat 4400.804 kb on - strand, within MPMX20_04198at 4400.804 kb on - strand, within MPMX20_04198at 4400.805 kb on + strand, within MPMX20_04198at 4400.809 kb on - strand, within MPMX20_04198at 4400.813 kb on + strand, within MPMX20_04198at 4400.815 kb on - strand, within MPMX20_04198at 4400.819 kb on - strand, within MPMX20_04198at 4400.821 kb on - strand, within MPMX20_04198at 4400.821 kb on - strand, within MPMX20_04198at 4400.837 kb on + strand, within MPMX20_04198at 4400.837 kb on + strand, within MPMX20_04198at 4400.837 kb on + strand, within MPMX20_04198at 4400.845 kb on - strand, within MPMX20_04198at 4400.845 kb on - strand, within MPMX20_04198at 4400.847 kb on + strand, within MPMX20_04198at 4400.853 kb on + strand, within MPMX20_04198at 4400.855 kb on - strand, within MPMX20_04198at 4400.855 kb on - strand, within MPMX20_04198at 4400.855 kb on - strand, within MPMX20_04198at 4400.855 kb on - strand, within MPMX20_04198at 4400.855 kb on - strand, within MPMX20_04198at 4400.855 kb on - strand, within MPMX20_04198at 4400.858 kb on + strand, within MPMX20_04198at 4400.877 kb on + strand, within MPMX20_04198at 4400.890 kb on + strand, within MPMX20_04198at 4400.891 kb on + strand, within MPMX20_04198at 4400.891 kb on + strand, within MPMX20_04198at 4400.899 kb on - strand, within MPMX20_04198at 4400.899 kb on - strand, within MPMX20_04198at 4400.899 kb on - strand, within MPMX20_04198at 4400.899 kb on - strand, within MPMX20_04198at 4400.899 kb on - strand, within MPMX20_04198at 4400.909 kb on - strand, within MPMX20_04198at 4400.912 kb on + strand, within MPMX20_04198at 4400.926 kb on - strand, within MPMX20_04198at 4400.926 kb on - strand, within MPMX20_04198at 4400.936 kb on - strand, within MPMX20_04198at 4400.940 kb on + strand, within MPMX20_04198at 4400.945 kb on + strand, within MPMX20_04198at 4400.945 kb on + strand, within MPMX20_04198at 4400.945 kb on + strand, within MPMX20_04198at 4400.945 kb on + strand, within MPMX20_04198at 4400.950 kb on + strand, within MPMX20_04198at 4400.950 kb on + strand, within MPMX20_04198at 4400.950 kb on + strand, within MPMX20_04198at 4400.950 kb on + strand, within MPMX20_04198at 4400.950 kb on + strand, within MPMX20_04198at 4400.953 kb on - strand, within MPMX20_04198at 4400.953 kb on - strand, within MPMX20_04198at 4400.953 kb on - strand, within MPMX20_04198at 4400.953 kb on - strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.955 kb on + strand, within MPMX20_04198at 4400.958 kb on - strand, within MPMX20_04198at 4400.958 kb on - strand, within MPMX20_04198at 4400.961 kb on + strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.963 kb on - strand, within MPMX20_04198at 4400.965 kb on - strand, within MPMX20_04198at 4400.965 kb on - strand, within MPMX20_04198at 4400.974 kb on + strand, within MPMX20_04198at 4400.974 kb on + strand, within MPMX20_04198at 4400.974 kb on + strand, within MPMX20_04198at 4400.974 kb on + strand, within MPMX20_04198at 4400.974 kb on + strand, within MPMX20_04198at 4400.982 kb on - strand, within MPMX20_04198at 4400.982 kb on - strand, within MPMX20_04198at 4401.008 kb on - strand, within MPMX20_04198at 4401.036 kb on + strand, within MPMX20_04198at 4401.044 kb on + strand, within MPMX20_04198at 4401.051 kb on - strand, within MPMX20_04198at 4401.063 kb on + strand, within MPMX20_04198at 4401.077 kb on + strand, within MPMX20_04198at 4401.086 kb on - strand, within MPMX20_04198at 4401.115 kb on + strand, within MPMX20_04198at 4401.121 kb on - strand, within MPMX20_04198at 4401.168 kb on + strandat 4401.231 kb on - strand, within MPMX20_04199at 4401.234 kb on + strand, within MPMX20_04199at 4401.235 kb on - strand, within MPMX20_04199at 4401.308 kb on - strand, within MPMX20_04199at 4401.310 kb on - strand, within MPMX20_04199at 4401.310 kb on - strand, within MPMX20_04199at 4401.334 kb on - strand, within MPMX20_04199at 4401.334 kb on - strand, within MPMX20_04199at 4401.336 kb on - strand, within MPMX20_04199at 4401.336 kb on - strand, within MPMX20_04199at 4401.341 kb on - strand, within MPMX20_04199at 4401.345 kb on - strand, within MPMX20_04199at 4401.352 kb on + strand, within MPMX20_04199at 4401.360 kb on - strand, within MPMX20_04199at 4401.360 kb on - strand, within MPMX20_04199at 4401.360 kb on - strand, within MPMX20_04199at 4401.360 kb on - strand, within MPMX20_04199at 4401.360 kb on - strand, within MPMX20_04199at 4401.360 kb on - strand, within MPMX20_04199at 4401.366 kb on - strand, within MPMX20_04199at 4401.376 kb on - strandat 4401.376 kb on - strandat 4401.409 kb on - strandat 4401.414 kb on + strandat 4401.416 kb on - strandat 4401.416 kb on - strandat 4401.422 kb on - strandat 4401.424 kb on + strandat 4401.432 kb on - strandat 4401.432 kb on - strandat 4401.454 kb on + strandat 4401.454 kb on + strandat 4401.459 kb on + strandat 4401.459 kb on + strandat 4401.462 kb on - strandat 4401.462 kb on - strandat 4401.462 kb on - strandat 4401.464 kb on + strandat 4401.467 kb on - strandat 4401.472 kb on - strandat 4401.477 kb on + strandat 4401.477 kb on + strandat 4401.477 kb on + strandat 4401.477 kb on + strandat 4401.477 kb on + strandat 4401.477 kb on + strandat 4401.477 kb on + strandat 4401.483 kb on - strandat 4401.483 kb on - strandat 4401.485 kb on - strandat 4401.485 kb on - strandat 4401.485 kb on - strandat 4401.485 kb on - strandat 4401.485 kb on - strandat 4401.511 kb on + strand, within MPMX20_04200at 4401.511 kb on + strand, within MPMX20_04200at 4401.519 kb on - strand, within MPMX20_04200at 4401.519 kb on - strand, within MPMX20_04200at 4401.519 kb on - strand, within MPMX20_04200at 4401.527 kb on - strand, within MPMX20_04200at 4401.537 kb on + strand, within MPMX20_04200at 4401.544 kb on + strand, within MPMX20_04200at 4401.546 kb on - strand, within MPMX20_04200at 4401.574 kb on - strand, within MPMX20_04200at 4401.596 kb on + strand, within MPMX20_04200at 4401.602 kb on + strand, within MPMX20_04200at 4401.602 kb on + strand, within MPMX20_04200at 4401.602 kb on + strand, within MPMX20_04200at 4401.602 kb on + strand, within MPMX20_04200at 4401.610 kb on - strand, within MPMX20_04200at 4401.612 kb on + strand, within MPMX20_04200at 4401.679 kb on + strand, within MPMX20_04200at 4401.716 kb on + strand, within MPMX20_04200at 4401.738 kb on + strand, within MPMX20_04200at 4401.749 kb on + strand, within MPMX20_04200at 4401.757 kb on - strand, within MPMX20_04200at 4401.781 kb on - strand, within MPMX20_04200at 4401.791 kb on - strand, within MPMX20_04200at 4401.822 kb on + strand, within MPMX20_04200at 4401.864 kb on + strandat 4401.873 kb on - strandat 4401.907 kb on - strandat 4401.914 kb on - strand, within MPMX20_04201at 4401.963 kb on + strand, within MPMX20_04201at 4401.968 kb on + strand, within MPMX20_04201at 4402.008 kb on - strand, within MPMX20_04201at 4402.026 kb on - strand, within MPMX20_04201at 4402.058 kb on + strand, within MPMX20_04201at 4402.066 kb on - strand, within MPMX20_04201at 4402.066 kb on - strand, within MPMX20_04201at 4402.144 kb on + strand, within MPMX20_04201

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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4,400,462 + MPMX20_04197 0.89 +3.4
4,400,489 + +1.6
4,400,490 + -2.4
4,400,522 + -0.7
4,400,540 + -1.4
4,400,582 + +0.8
4,400,597 + -0.7
4,400,615 + -0.1
4,400,617 + -0.2
4,400,623 - +0.1
4,400,625 - -0.0
4,400,625 - -1.4
4,400,626 - -1.0
4,400,744 + -2.4
4,400,752 - +0.2
4,400,786 + -0.5
4,400,794 - +1.0
4,400,804 - MPMX20_04198 0.10 +0.8
4,400,804 - MPMX20_04198 0.10 -0.7
4,400,805 + MPMX20_04198 0.11 +0.7
4,400,809 - MPMX20_04198 0.12 -0.4
4,400,813 + MPMX20_04198 0.13 -0.3
4,400,815 - MPMX20_04198 0.13 -0.9
4,400,819 - MPMX20_04198 0.14 -0.2
4,400,821 - MPMX20_04198 0.14 +0.3
4,400,821 - MPMX20_04198 0.14 -1.7
4,400,837 + MPMX20_04198 0.18 -0.3
4,400,837 + MPMX20_04198 0.18 +0.9
4,400,837 + MPMX20_04198 0.18 -0.2
4,400,845 - MPMX20_04198 0.20 +1.8
4,400,845 - MPMX20_04198 0.20 +1.8
4,400,847 + MPMX20_04198 0.21 -0.1
4,400,853 + MPMX20_04198 0.22 +1.0
4,400,855 - MPMX20_04198 0.23 +0.7
4,400,855 - MPMX20_04198 0.23 -1.3
4,400,855 - MPMX20_04198 0.23 -0.3
4,400,855 - MPMX20_04198 0.23 +0.3
4,400,855 - MPMX20_04198 0.23 +1.4
4,400,855 - MPMX20_04198 0.23 +0.1
4,400,858 + MPMX20_04198 0.23 -0.6
4,400,877 + MPMX20_04198 0.28 -0.8
4,400,890 + MPMX20_04198 0.31 +1.0
4,400,891 + MPMX20_04198 0.31 -0.2
4,400,891 + MPMX20_04198 0.31 +0.6
4,400,899 - MPMX20_04198 0.33 -1.5
4,400,899 - MPMX20_04198 0.33 -0.6
4,400,899 - MPMX20_04198 0.33 -0.5
4,400,899 - MPMX20_04198 0.33 +0.2
4,400,899 - MPMX20_04198 0.33 +1.0
4,400,909 - MPMX20_04198 0.36 +0.0
4,400,912 + MPMX20_04198 0.36 -0.3
4,400,926 - MPMX20_04198 0.40 -0.5
4,400,926 - MPMX20_04198 0.40 +0.4
4,400,936 - MPMX20_04198 0.42 -0.5
4,400,940 + MPMX20_04198 0.43 -2.5
4,400,945 + MPMX20_04198 0.44 -0.5
4,400,945 + MPMX20_04198 0.44 -1.1
4,400,945 + MPMX20_04198 0.44 +1.0
4,400,945 + MPMX20_04198 0.44 -0.7
4,400,950 + MPMX20_04198 0.46 -0.6
4,400,950 + MPMX20_04198 0.46 -0.3
4,400,950 + MPMX20_04198 0.46 +0.4
4,400,950 + MPMX20_04198 0.46 -0.2
4,400,950 + MPMX20_04198 0.46 +0.5
4,400,953 - MPMX20_04198 0.46 +0.6
4,400,953 - MPMX20_04198 0.46 +0.6
4,400,953 - MPMX20_04198 0.46 -1.0
4,400,953 - MPMX20_04198 0.46 +0.7
4,400,955 + MPMX20_04198 0.47 -0.0
4,400,955 + MPMX20_04198 0.47 -0.1
4,400,955 + MPMX20_04198 0.47 +1.0
4,400,955 + MPMX20_04198 0.47 -0.9
4,400,955 + MPMX20_04198 0.47 +0.5
4,400,955 + MPMX20_04198 0.47 -0.9
4,400,955 + MPMX20_04198 0.47 +0.4
4,400,955 + MPMX20_04198 0.47 -0.3
4,400,955 + MPMX20_04198 0.47 -0.0
4,400,955 + MPMX20_04198 0.47 +0.7
4,400,955 + MPMX20_04198 0.47 -1.6
4,400,958 - MPMX20_04198 0.48 +2.2
4,400,958 - MPMX20_04198 0.48 -1.3
4,400,961 + MPMX20_04198 0.48 -0.4
4,400,963 - MPMX20_04198 0.49 +0.4
4,400,963 - MPMX20_04198 0.49 -0.4
4,400,963 - MPMX20_04198 0.49 -0.7
4,400,963 - MPMX20_04198 0.49 +0.4
4,400,963 - MPMX20_04198 0.49 -2.1
4,400,963 - MPMX20_04198 0.49 -1.4
4,400,963 - MPMX20_04198 0.49 -0.9
4,400,963 - MPMX20_04198 0.49 +0.8
4,400,963 - MPMX20_04198 0.49 -0.3
4,400,963 - MPMX20_04198 0.49 +0.3
4,400,963 - MPMX20_04198 0.49 +0.4
4,400,963 - MPMX20_04198 0.49 -0.2
4,400,963 - MPMX20_04198 0.49 -0.3
4,400,963 - MPMX20_04198 0.49 +0.2
4,400,965 - MPMX20_04198 0.49 -0.1
4,400,965 - MPMX20_04198 0.49 +0.3
4,400,974 + MPMX20_04198 0.51 +0.4
4,400,974 + MPMX20_04198 0.51 -0.2
4,400,974 + MPMX20_04198 0.51 -0.6
4,400,974 + MPMX20_04198 0.51 -1.2
4,400,974 + MPMX20_04198 0.51 -1.0
4,400,982 - MPMX20_04198 0.53 +0.1
4,400,982 - MPMX20_04198 0.53 -0.7
4,401,008 - MPMX20_04198 0.60 -0.3
4,401,036 + MPMX20_04198 0.66 +0.4
4,401,044 + MPMX20_04198 0.68 +0.6
4,401,051 - MPMX20_04198 0.70 +1.0
4,401,063 + MPMX20_04198 0.73 -0.2
4,401,077 + MPMX20_04198 0.76 +0.1
4,401,086 - MPMX20_04198 0.79 +2.2
4,401,115 + MPMX20_04198 0.86 -1.3
4,401,121 - MPMX20_04198 0.87 +0.3
4,401,168 + +1.4
4,401,231 - MPMX20_04199 0.26 -0.3
4,401,234 + MPMX20_04199 0.27 -0.0
4,401,235 - MPMX20_04199 0.28 -0.1
4,401,308 - MPMX20_04199 0.62 -2.6
4,401,310 - MPMX20_04199 0.62 +0.5
4,401,310 - MPMX20_04199 0.62 +1.8
4,401,334 - MPMX20_04199 0.74 +1.3
4,401,334 - MPMX20_04199 0.74 -1.3
4,401,336 - MPMX20_04199 0.75 +0.4
4,401,336 - MPMX20_04199 0.75 -0.0
4,401,341 - MPMX20_04199 0.77 -0.2
4,401,345 - MPMX20_04199 0.79 +0.9
4,401,352 + MPMX20_04199 0.82 +0.5
4,401,360 - MPMX20_04199 0.86 +1.2
4,401,360 - MPMX20_04199 0.86 -0.1
4,401,360 - MPMX20_04199 0.86 +0.8
4,401,360 - MPMX20_04199 0.86 -0.4
4,401,360 - MPMX20_04199 0.86 -0.0
4,401,360 - MPMX20_04199 0.86 +0.7
4,401,366 - MPMX20_04199 0.88 -1.4
4,401,376 - +0.5
4,401,376 - -0.2
4,401,409 - -0.2
4,401,414 + -0.5
4,401,416 - -0.2
4,401,416 - -0.6
4,401,422 - -0.6
4,401,424 + -0.0
4,401,432 - +0.5
4,401,432 - +0.3
4,401,454 + -2.1
4,401,454 + -2.9
4,401,459 + -2.6
4,401,459 + -1.9
4,401,462 - -1.7
4,401,462 - -4.2
4,401,462 - -2.3
4,401,464 + -2.4
4,401,467 - -0.2
4,401,472 - +0.1
4,401,477 + -1.4
4,401,477 + -1.6
4,401,477 + -1.7
4,401,477 + -1.8
4,401,477 + -2.3
4,401,477 + -2.9
4,401,477 + -0.7
4,401,483 - -3.5
4,401,483 - -2.7
4,401,485 - -2.1
4,401,485 - -0.6
4,401,485 - -1.3
4,401,485 - -1.1
4,401,485 - -0.9
4,401,511 + MPMX20_04200 0.15 -1.4
4,401,511 + MPMX20_04200 0.15 -2.0
4,401,519 - MPMX20_04200 0.17 -1.0
4,401,519 - MPMX20_04200 0.17 -0.0
4,401,519 - MPMX20_04200 0.17 -4.1
4,401,527 - MPMX20_04200 0.19 -2.9
4,401,537 + MPMX20_04200 0.21 -2.6
4,401,544 + MPMX20_04200 0.23 -0.7
4,401,546 - MPMX20_04200 0.23 -4.3
4,401,574 - MPMX20_04200 0.30 -1.6
4,401,596 + MPMX20_04200 0.35 -2.2
4,401,602 + MPMX20_04200 0.36 -2.6
4,401,602 + MPMX20_04200 0.36 -0.0
4,401,602 + MPMX20_04200 0.36 -3.5
4,401,602 + MPMX20_04200 0.36 -2.6
4,401,610 - MPMX20_04200 0.38 -1.5
4,401,612 + MPMX20_04200 0.39 -2.2
4,401,679 + MPMX20_04200 0.55 -2.9
4,401,716 + MPMX20_04200 0.63 -1.4
4,401,738 + MPMX20_04200 0.69 -1.0
4,401,749 + MPMX20_04200 0.71 -2.3
4,401,757 - MPMX20_04200 0.73 +0.1
4,401,781 - MPMX20_04200 0.79 -1.0
4,401,791 - MPMX20_04200 0.81 -1.8
4,401,822 + MPMX20_04200 0.88 +1.6
4,401,864 + -1.0
4,401,873 - -3.4
4,401,907 - -0.1
4,401,914 - MPMX20_04201 0.11 +0.7
4,401,963 + MPMX20_04201 0.24 -1.8
4,401,968 + MPMX20_04201 0.26 +0.2
4,402,008 - MPMX20_04201 0.37 -0.1
4,402,026 - MPMX20_04201 0.41 -0.9
4,402,058 + MPMX20_04201 0.50 -0.4
4,402,066 - MPMX20_04201 0.52 +0.1
4,402,066 - MPMX20_04201 0.52 +1.6
4,402,144 + MPMX20_04201 0.73 -0.3

Or see this region's nucleotide sequence