Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01674 and MPMX20_01675 are separated by 321 nucleotides MPMX20_01675 and MPMX20_01676 are separated by 57 nucleotides
MPMX20_01674: MPMX20_01674 - Maltose/maltodextrin import ATP-binding protein MalK, at 1,772,113 to 1,773,228
_01674
MPMX20_01675: MPMX20_01675 - Cyclodextrin-binding protein, at 1,773,550 to 1,774,764
_01675
MPMX20_01676: MPMX20_01676 - hypothetical protein, at 1,774,822 to 1,776,126
_01676
Position (kb)
1773
1774
1775 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1772.556 kb on + strand, within MPMX20_01674 at 1772.649 kb on + strand, within MPMX20_01674 at 1772.649 kb on + strand, within MPMX20_01674 at 1772.668 kb on - strand, within MPMX20_01674 at 1772.668 kb on - strand, within MPMX20_01674 at 1772.668 kb on - strand, within MPMX20_01674 at 1772.698 kb on + strand, within MPMX20_01674 at 1772.787 kb on - strand, within MPMX20_01674 at 1772.815 kb on - strand, within MPMX20_01674 at 1772.845 kb on - strand, within MPMX20_01674 at 1772.882 kb on + strand, within MPMX20_01674 at 1772.890 kb on - strand, within MPMX20_01674 at 1772.940 kb on - strand, within MPMX20_01674 at 1772.989 kb on + strand, within MPMX20_01674 at 1773.007 kb on + strand, within MPMX20_01674 at 1773.033 kb on + strand, within MPMX20_01674 at 1773.112 kb on + strand, within MPMX20_01674 at 1773.158 kb on + strand at 1773.159 kb on + strand at 1773.169 kb on + strand at 1773.177 kb on - strand at 1773.182 kb on - strand at 1773.208 kb on + strand at 1773.446 kb on - strand at 1773.495 kb on - strand at 1773.495 kb on - strand at 1773.495 kb on - strand at 1773.571 kb on + strand at 1773.595 kb on + strand at 1773.595 kb on + strand at 1773.595 kb on + strand at 1773.603 kb on - strand at 1773.618 kb on + strand at 1773.699 kb on + strand, within MPMX20_01675 at 1773.700 kb on - strand, within MPMX20_01675 at 1773.700 kb on - strand, within MPMX20_01675 at 1773.700 kb on - strand, within MPMX20_01675 at 1773.706 kb on - strand, within MPMX20_01675 at 1773.711 kb on + strand, within MPMX20_01675 at 1773.778 kb on - strand, within MPMX20_01675 at 1773.783 kb on + strand, within MPMX20_01675 at 1773.835 kb on + strand, within MPMX20_01675 at 1773.901 kb on + strand, within MPMX20_01675 at 1773.908 kb on + strand, within MPMX20_01675 at 1773.909 kb on + strand, within MPMX20_01675 at 1773.917 kb on - strand, within MPMX20_01675 at 1773.917 kb on - strand, within MPMX20_01675 at 1773.921 kb on + strand, within MPMX20_01675 at 1774.047 kb on + strand, within MPMX20_01675 at 1774.069 kb on - strand, within MPMX20_01675 at 1774.073 kb on + strand, within MPMX20_01675 at 1774.150 kb on + strand, within MPMX20_01675 at 1774.150 kb on + strand, within MPMX20_01675 at 1774.150 kb on + strand, within MPMX20_01675 at 1774.244 kb on + strand, within MPMX20_01675 at 1774.264 kb on + strand, within MPMX20_01675 at 1774.309 kb on - strand, within MPMX20_01675 at 1774.309 kb on - strand, within MPMX20_01675 at 1774.346 kb on + strand, within MPMX20_01675 at 1774.346 kb on + strand, within MPMX20_01675 at 1774.359 kb on + strand, within MPMX20_01675 at 1774.407 kb on + strand, within MPMX20_01675 at 1774.407 kb on + strand, within MPMX20_01675 at 1774.415 kb on - strand, within MPMX20_01675 at 1774.415 kb on - strand, within MPMX20_01675 at 1774.431 kb on - strand, within MPMX20_01675 at 1774.499 kb on + strand, within MPMX20_01675 at 1774.559 kb on - strand, within MPMX20_01675 at 1774.609 kb on + strand, within MPMX20_01675 at 1774.643 kb on - strand at 1774.643 kb on - strand at 1774.648 kb on - strand at 1774.664 kb on + strand at 1774.676 kb on - strand at 1774.699 kb on + strand at 1774.709 kb on + strand at 1774.734 kb on + strand at 1774.766 kb on + strand at 1774.898 kb on - strand at 1774.920 kb on - strand at 1774.949 kb on + strand at 1775.005 kb on + strand, within MPMX20_01676 at 1775.005 kb on + strand, within MPMX20_01676 at 1775.005 kb on + strand, within MPMX20_01676 at 1775.005 kb on + strand, within MPMX20_01676 at 1775.013 kb on - strand, within MPMX20_01676 at 1775.013 kb on - strand, within MPMX20_01676 at 1775.013 kb on - strand, within MPMX20_01676 at 1775.028 kb on + strand, within MPMX20_01676 at 1775.151 kb on + strand, within MPMX20_01676 at 1775.159 kb on - strand, within MPMX20_01676 at 1775.175 kb on + strand, within MPMX20_01676 at 1775.183 kb on - strand, within MPMX20_01676 at 1775.183 kb on - strand, within MPMX20_01676 at 1775.240 kb on + strand, within MPMX20_01676 at 1775.240 kb on - strand, within MPMX20_01676 at 1775.247 kb on - strand, within MPMX20_01676 at 1775.254 kb on - strand, within MPMX20_01676 at 1775.304 kb on - strand, within MPMX20_01676 at 1775.312 kb on + strand, within MPMX20_01676 at 1775.318 kb on + strand, within MPMX20_01676 at 1775.336 kb on + strand, within MPMX20_01676 at 1775.368 kb on - strand, within MPMX20_01676 at 1775.411 kb on + strand, within MPMX20_01676 at 1775.436 kb on + strand, within MPMX20_01676 at 1775.438 kb on + strand, within MPMX20_01676 at 1775.444 kb on - strand, within MPMX20_01676 at 1775.444 kb on - strand, within MPMX20_01676 at 1775.444 kb on - strand, within MPMX20_01676 at 1775.444 kb on - strand, within MPMX20_01676 at 1775.448 kb on + strand, within MPMX20_01676 at 1775.448 kb on + strand, within MPMX20_01676 at 1775.456 kb on - strand, within MPMX20_01676 at 1775.466 kb on + strand, within MPMX20_01676 at 1775.471 kb on - strand, within MPMX20_01676 at 1775.484 kb on + strand, within MPMX20_01676 at 1775.490 kb on - strand, within MPMX20_01676 at 1775.591 kb on - strand, within MPMX20_01676 at 1775.606 kb on - strand, within MPMX20_01676 at 1775.693 kb on - strand, within MPMX20_01676 at 1775.737 kb on - strand, within MPMX20_01676 at 1775.753 kb on - strand, within MPMX20_01676
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 1,772,556 + MPMX20_01674 0.40 +0.4 1,772,649 + MPMX20_01674 0.48 -0.5 1,772,649 + MPMX20_01674 0.48 +0.3 1,772,668 - MPMX20_01674 0.50 -0.2 1,772,668 - MPMX20_01674 0.50 -0.3 1,772,668 - MPMX20_01674 0.50 +0.4 1,772,698 + MPMX20_01674 0.52 -1.2 1,772,787 - MPMX20_01674 0.60 -0.3 1,772,815 - MPMX20_01674 0.63 -1.3 1,772,845 - MPMX20_01674 0.66 +0.3 1,772,882 + MPMX20_01674 0.69 -0.9 1,772,890 - MPMX20_01674 0.70 -0.9 1,772,940 - MPMX20_01674 0.74 -0.2 1,772,989 + MPMX20_01674 0.78 +0.5 1,773,007 + MPMX20_01674 0.80 +0.1 1,773,033 + MPMX20_01674 0.82 +0.7 1,773,112 + MPMX20_01674 0.90 +0.5 1,773,158 + +0.2 1,773,159 + -1.6 1,773,169 + +0.0 1,773,177 - +1.1 1,773,182 - +0.3 1,773,208 + +0.2 1,773,446 - +0.4 1,773,495 - +0.7 1,773,495 - -0.4 1,773,495 - -0.1 1,773,571 + -1.1 1,773,595 + +0.2 1,773,595 + +1.9 1,773,595 + -0.1 1,773,603 - +1.5 1,773,618 + -1.6 1,773,699 + MPMX20_01675 0.12 -0.3 1,773,700 - MPMX20_01675 0.12 -0.1 1,773,700 - MPMX20_01675 0.12 -0.3 1,773,700 - MPMX20_01675 0.12 +0.4 1,773,706 - MPMX20_01675 0.13 -1.2 1,773,711 + MPMX20_01675 0.13 +0.3 1,773,778 - MPMX20_01675 0.19 +0.2 1,773,783 + MPMX20_01675 0.19 +0.8 1,773,835 + MPMX20_01675 0.23 -0.2 1,773,901 + MPMX20_01675 0.29 +0.9 1,773,908 + MPMX20_01675 0.29 -0.9 1,773,909 + MPMX20_01675 0.30 -1.0 1,773,917 - MPMX20_01675 0.30 +0.5 1,773,917 - MPMX20_01675 0.30 +1.4 1,773,921 + MPMX20_01675 0.31 -1.7 1,774,047 + MPMX20_01675 0.41 -0.5 1,774,069 - MPMX20_01675 0.43 -0.0 1,774,073 + MPMX20_01675 0.43 +0.7 1,774,150 + MPMX20_01675 0.49 -0.9 1,774,150 + MPMX20_01675 0.49 +0.3 1,774,150 + MPMX20_01675 0.49 +0.2 1,774,244 + MPMX20_01675 0.57 +1.2 1,774,264 + MPMX20_01675 0.59 +0.6 1,774,309 - MPMX20_01675 0.62 -1.5 1,774,309 - MPMX20_01675 0.62 +0.4 1,774,346 + MPMX20_01675 0.66 -0.9 1,774,346 + MPMX20_01675 0.66 +0.4 1,774,359 + MPMX20_01675 0.67 -0.8 1,774,407 + MPMX20_01675 0.71 -0.2 1,774,407 + MPMX20_01675 0.71 +1.0 1,774,415 - MPMX20_01675 0.71 -1.0 1,774,415 - MPMX20_01675 0.71 -0.0 1,774,431 - MPMX20_01675 0.73 +0.4 1,774,499 + MPMX20_01675 0.78 +2.9 1,774,559 - MPMX20_01675 0.83 -1.5 1,774,609 + MPMX20_01675 0.87 -2.7 1,774,643 - -2.5 1,774,643 - +0.6 1,774,648 - +0.3 1,774,664 + -0.2 1,774,676 - +0.8 1,774,699 + -2.0 1,774,709 + -3.1 1,774,734 + -0.1 1,774,766 + +0.2 1,774,898 - -0.5 1,774,920 - +0.1 1,774,949 + +0.1 1,775,005 + MPMX20_01676 0.14 -0.5 1,775,005 + MPMX20_01676 0.14 +0.2 1,775,005 + MPMX20_01676 0.14 +1.1 1,775,005 + MPMX20_01676 0.14 +1.8 1,775,013 - MPMX20_01676 0.15 -0.6 1,775,013 - MPMX20_01676 0.15 -0.6 1,775,013 - MPMX20_01676 0.15 -0.6 1,775,028 + MPMX20_01676 0.16 -0.2 1,775,151 + MPMX20_01676 0.25 -1.0 1,775,159 - MPMX20_01676 0.26 -0.5 1,775,175 + MPMX20_01676 0.27 -0.3 1,775,183 - MPMX20_01676 0.28 -0.3 1,775,183 - MPMX20_01676 0.28 -0.0 1,775,240 + MPMX20_01676 0.32 -0.3 1,775,240 - MPMX20_01676 0.32 +0.6 1,775,247 - MPMX20_01676 0.33 -0.0 1,775,254 - MPMX20_01676 0.33 -0.2 1,775,304 - MPMX20_01676 0.37 -0.4 1,775,312 + MPMX20_01676 0.38 +0.5 1,775,318 + MPMX20_01676 0.38 -0.6 1,775,336 + MPMX20_01676 0.39 -1.0 1,775,368 - MPMX20_01676 0.42 +0.3 1,775,411 + MPMX20_01676 0.45 +0.1 1,775,436 + MPMX20_01676 0.47 -0.9 1,775,438 + MPMX20_01676 0.47 +0.1 1,775,444 - MPMX20_01676 0.48 +0.1 1,775,444 - MPMX20_01676 0.48 +0.2 1,775,444 - MPMX20_01676 0.48 -0.1 1,775,444 - MPMX20_01676 0.48 +0.0 1,775,448 + MPMX20_01676 0.48 -0.1 1,775,448 + MPMX20_01676 0.48 +0.4 1,775,456 - MPMX20_01676 0.49 -0.0 1,775,466 + MPMX20_01676 0.49 +0.3 1,775,471 - MPMX20_01676 0.50 +0.0 1,775,484 + MPMX20_01676 0.51 -1.4 1,775,490 - MPMX20_01676 0.51 -0.3 1,775,591 - MPMX20_01676 0.59 +0.9 1,775,606 - MPMX20_01676 0.60 +0.3 1,775,693 - MPMX20_01676 0.67 -0.1 1,775,737 - MPMX20_01676 0.70 -0.3 1,775,753 - MPMX20_01676 0.71 -0.4
Or see this region's nucleotide sequence