Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01675

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01674 and MPMX20_01675 are separated by 321 nucleotidesMPMX20_01675 and MPMX20_01676 are separated by 57 nucleotides MPMX20_01674: MPMX20_01674 - Maltose/maltodextrin import ATP-binding protein MalK, at 1,772,113 to 1,773,228 _01674 MPMX20_01675: MPMX20_01675 - Cyclodextrin-binding protein, at 1,773,550 to 1,774,764 _01675 MPMX20_01676: MPMX20_01676 - hypothetical protein, at 1,774,822 to 1,776,126 _01676 Position (kb) 1773 1774 1775Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1772.556 kb on + strand, within MPMX20_01674at 1772.649 kb on + strand, within MPMX20_01674at 1772.649 kb on + strand, within MPMX20_01674at 1772.668 kb on - strand, within MPMX20_01674at 1772.668 kb on - strand, within MPMX20_01674at 1772.668 kb on - strand, within MPMX20_01674at 1772.698 kb on + strand, within MPMX20_01674at 1772.787 kb on - strand, within MPMX20_01674at 1772.815 kb on - strand, within MPMX20_01674at 1772.845 kb on - strand, within MPMX20_01674at 1772.882 kb on + strand, within MPMX20_01674at 1772.890 kb on - strand, within MPMX20_01674at 1772.940 kb on - strand, within MPMX20_01674at 1772.989 kb on + strand, within MPMX20_01674at 1773.007 kb on + strand, within MPMX20_01674at 1773.033 kb on + strand, within MPMX20_01674at 1773.112 kb on + strand, within MPMX20_01674at 1773.158 kb on + strandat 1773.159 kb on + strandat 1773.169 kb on + strandat 1773.177 kb on - strandat 1773.182 kb on - strandat 1773.208 kb on + strandat 1773.446 kb on - strandat 1773.495 kb on - strandat 1773.495 kb on - strandat 1773.495 kb on - strandat 1773.571 kb on + strandat 1773.595 kb on + strandat 1773.595 kb on + strandat 1773.595 kb on + strandat 1773.603 kb on - strandat 1773.618 kb on + strandat 1773.699 kb on + strand, within MPMX20_01675at 1773.700 kb on - strand, within MPMX20_01675at 1773.700 kb on - strand, within MPMX20_01675at 1773.700 kb on - strand, within MPMX20_01675at 1773.706 kb on - strand, within MPMX20_01675at 1773.711 kb on + strand, within MPMX20_01675at 1773.778 kb on - strand, within MPMX20_01675at 1773.783 kb on + strand, within MPMX20_01675at 1773.835 kb on + strand, within MPMX20_01675at 1773.901 kb on + strand, within MPMX20_01675at 1773.908 kb on + strand, within MPMX20_01675at 1773.909 kb on + strand, within MPMX20_01675at 1773.917 kb on - strand, within MPMX20_01675at 1773.917 kb on - strand, within MPMX20_01675at 1773.921 kb on + strand, within MPMX20_01675at 1774.047 kb on + strand, within MPMX20_01675at 1774.069 kb on - strand, within MPMX20_01675at 1774.073 kb on + strand, within MPMX20_01675at 1774.150 kb on + strand, within MPMX20_01675at 1774.150 kb on + strand, within MPMX20_01675at 1774.150 kb on + strand, within MPMX20_01675at 1774.244 kb on + strand, within MPMX20_01675at 1774.264 kb on + strand, within MPMX20_01675at 1774.309 kb on - strand, within MPMX20_01675at 1774.309 kb on - strand, within MPMX20_01675at 1774.346 kb on + strand, within MPMX20_01675at 1774.346 kb on + strand, within MPMX20_01675at 1774.359 kb on + strand, within MPMX20_01675at 1774.407 kb on + strand, within MPMX20_01675at 1774.407 kb on + strand, within MPMX20_01675at 1774.415 kb on - strand, within MPMX20_01675at 1774.415 kb on - strand, within MPMX20_01675at 1774.431 kb on - strand, within MPMX20_01675at 1774.499 kb on + strand, within MPMX20_01675at 1774.559 kb on - strand, within MPMX20_01675at 1774.609 kb on + strand, within MPMX20_01675at 1774.643 kb on - strandat 1774.643 kb on - strandat 1774.648 kb on - strandat 1774.664 kb on + strandat 1774.676 kb on - strandat 1774.699 kb on + strandat 1774.709 kb on + strandat 1774.734 kb on + strandat 1774.766 kb on + strandat 1774.898 kb on - strandat 1774.920 kb on - strandat 1774.949 kb on + strandat 1775.005 kb on + strand, within MPMX20_01676at 1775.005 kb on + strand, within MPMX20_01676at 1775.005 kb on + strand, within MPMX20_01676at 1775.005 kb on + strand, within MPMX20_01676at 1775.013 kb on - strand, within MPMX20_01676at 1775.013 kb on - strand, within MPMX20_01676at 1775.013 kb on - strand, within MPMX20_01676at 1775.028 kb on + strand, within MPMX20_01676at 1775.151 kb on + strand, within MPMX20_01676at 1775.159 kb on - strand, within MPMX20_01676at 1775.175 kb on + strand, within MPMX20_01676at 1775.183 kb on - strand, within MPMX20_01676at 1775.183 kb on - strand, within MPMX20_01676at 1775.240 kb on + strand, within MPMX20_01676at 1775.240 kb on - strand, within MPMX20_01676at 1775.247 kb on - strand, within MPMX20_01676at 1775.254 kb on - strand, within MPMX20_01676at 1775.304 kb on - strand, within MPMX20_01676at 1775.312 kb on + strand, within MPMX20_01676at 1775.318 kb on + strand, within MPMX20_01676at 1775.336 kb on + strand, within MPMX20_01676at 1775.368 kb on - strand, within MPMX20_01676at 1775.411 kb on + strand, within MPMX20_01676at 1775.436 kb on + strand, within MPMX20_01676at 1775.438 kb on + strand, within MPMX20_01676at 1775.444 kb on - strand, within MPMX20_01676at 1775.444 kb on - strand, within MPMX20_01676at 1775.444 kb on - strand, within MPMX20_01676at 1775.444 kb on - strand, within MPMX20_01676at 1775.448 kb on + strand, within MPMX20_01676at 1775.448 kb on + strand, within MPMX20_01676at 1775.456 kb on - strand, within MPMX20_01676at 1775.466 kb on + strand, within MPMX20_01676at 1775.471 kb on - strand, within MPMX20_01676at 1775.484 kb on + strand, within MPMX20_01676at 1775.490 kb on - strand, within MPMX20_01676at 1775.591 kb on - strand, within MPMX20_01676at 1775.606 kb on - strand, within MPMX20_01676at 1775.693 kb on - strand, within MPMX20_01676at 1775.737 kb on - strand, within MPMX20_01676at 1775.753 kb on - strand, within MPMX20_01676

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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1,772,556 + MPMX20_01674 0.40 +0.4
1,772,649 + MPMX20_01674 0.48 -0.5
1,772,649 + MPMX20_01674 0.48 +0.3
1,772,668 - MPMX20_01674 0.50 -0.2
1,772,668 - MPMX20_01674 0.50 -0.3
1,772,668 - MPMX20_01674 0.50 +0.4
1,772,698 + MPMX20_01674 0.52 -1.2
1,772,787 - MPMX20_01674 0.60 -0.3
1,772,815 - MPMX20_01674 0.63 -1.3
1,772,845 - MPMX20_01674 0.66 +0.3
1,772,882 + MPMX20_01674 0.69 -0.9
1,772,890 - MPMX20_01674 0.70 -0.9
1,772,940 - MPMX20_01674 0.74 -0.2
1,772,989 + MPMX20_01674 0.78 +0.5
1,773,007 + MPMX20_01674 0.80 +0.1
1,773,033 + MPMX20_01674 0.82 +0.7
1,773,112 + MPMX20_01674 0.90 +0.5
1,773,158 + +0.2
1,773,159 + -1.6
1,773,169 + +0.0
1,773,177 - +1.1
1,773,182 - +0.3
1,773,208 + +0.2
1,773,446 - +0.4
1,773,495 - +0.7
1,773,495 - -0.4
1,773,495 - -0.1
1,773,571 + -1.1
1,773,595 + +0.2
1,773,595 + +1.9
1,773,595 + -0.1
1,773,603 - +1.5
1,773,618 + -1.6
1,773,699 + MPMX20_01675 0.12 -0.3
1,773,700 - MPMX20_01675 0.12 -0.1
1,773,700 - MPMX20_01675 0.12 -0.3
1,773,700 - MPMX20_01675 0.12 +0.4
1,773,706 - MPMX20_01675 0.13 -1.2
1,773,711 + MPMX20_01675 0.13 +0.3
1,773,778 - MPMX20_01675 0.19 +0.2
1,773,783 + MPMX20_01675 0.19 +0.8
1,773,835 + MPMX20_01675 0.23 -0.2
1,773,901 + MPMX20_01675 0.29 +0.9
1,773,908 + MPMX20_01675 0.29 -0.9
1,773,909 + MPMX20_01675 0.30 -1.0
1,773,917 - MPMX20_01675 0.30 +0.5
1,773,917 - MPMX20_01675 0.30 +1.4
1,773,921 + MPMX20_01675 0.31 -1.7
1,774,047 + MPMX20_01675 0.41 -0.5
1,774,069 - MPMX20_01675 0.43 -0.0
1,774,073 + MPMX20_01675 0.43 +0.7
1,774,150 + MPMX20_01675 0.49 -0.9
1,774,150 + MPMX20_01675 0.49 +0.3
1,774,150 + MPMX20_01675 0.49 +0.2
1,774,244 + MPMX20_01675 0.57 +1.2
1,774,264 + MPMX20_01675 0.59 +0.6
1,774,309 - MPMX20_01675 0.62 -1.5
1,774,309 - MPMX20_01675 0.62 +0.4
1,774,346 + MPMX20_01675 0.66 -0.9
1,774,346 + MPMX20_01675 0.66 +0.4
1,774,359 + MPMX20_01675 0.67 -0.8
1,774,407 + MPMX20_01675 0.71 -0.2
1,774,407 + MPMX20_01675 0.71 +1.0
1,774,415 - MPMX20_01675 0.71 -1.0
1,774,415 - MPMX20_01675 0.71 -0.0
1,774,431 - MPMX20_01675 0.73 +0.4
1,774,499 + MPMX20_01675 0.78 +2.9
1,774,559 - MPMX20_01675 0.83 -1.5
1,774,609 + MPMX20_01675 0.87 -2.7
1,774,643 - -2.5
1,774,643 - +0.6
1,774,648 - +0.3
1,774,664 + -0.2
1,774,676 - +0.8
1,774,699 + -2.0
1,774,709 + -3.1
1,774,734 + -0.1
1,774,766 + +0.2
1,774,898 - -0.5
1,774,920 - +0.1
1,774,949 + +0.1
1,775,005 + MPMX20_01676 0.14 -0.5
1,775,005 + MPMX20_01676 0.14 +0.2
1,775,005 + MPMX20_01676 0.14 +1.1
1,775,005 + MPMX20_01676 0.14 +1.8
1,775,013 - MPMX20_01676 0.15 -0.6
1,775,013 - MPMX20_01676 0.15 -0.6
1,775,013 - MPMX20_01676 0.15 -0.6
1,775,028 + MPMX20_01676 0.16 -0.2
1,775,151 + MPMX20_01676 0.25 -1.0
1,775,159 - MPMX20_01676 0.26 -0.5
1,775,175 + MPMX20_01676 0.27 -0.3
1,775,183 - MPMX20_01676 0.28 -0.3
1,775,183 - MPMX20_01676 0.28 -0.0
1,775,240 + MPMX20_01676 0.32 -0.3
1,775,240 - MPMX20_01676 0.32 +0.6
1,775,247 - MPMX20_01676 0.33 -0.0
1,775,254 - MPMX20_01676 0.33 -0.2
1,775,304 - MPMX20_01676 0.37 -0.4
1,775,312 + MPMX20_01676 0.38 +0.5
1,775,318 + MPMX20_01676 0.38 -0.6
1,775,336 + MPMX20_01676 0.39 -1.0
1,775,368 - MPMX20_01676 0.42 +0.3
1,775,411 + MPMX20_01676 0.45 +0.1
1,775,436 + MPMX20_01676 0.47 -0.9
1,775,438 + MPMX20_01676 0.47 +0.1
1,775,444 - MPMX20_01676 0.48 +0.1
1,775,444 - MPMX20_01676 0.48 +0.2
1,775,444 - MPMX20_01676 0.48 -0.1
1,775,444 - MPMX20_01676 0.48 +0.0
1,775,448 + MPMX20_01676 0.48 -0.1
1,775,448 + MPMX20_01676 0.48 +0.4
1,775,456 - MPMX20_01676 0.49 -0.0
1,775,466 + MPMX20_01676 0.49 +0.3
1,775,471 - MPMX20_01676 0.50 +0.0
1,775,484 + MPMX20_01676 0.51 -1.4
1,775,490 - MPMX20_01676 0.51 -0.3
1,775,591 - MPMX20_01676 0.59 +0.9
1,775,606 - MPMX20_01676 0.60 +0.3
1,775,693 - MPMX20_01676 0.67 -0.1
1,775,737 - MPMX20_01676 0.70 -0.3
1,775,753 - MPMX20_01676 0.71 -0.4

Or see this region's nucleotide sequence