Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01458

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_01457 and MPMX20_01458 are separated by 76 nucleotidesMPMX20_01458 and MPMX20_01459 are separated by 17 nucleotides MPMX20_01457: MPMX20_01457 - putative ABC transporter ATP-binding protein YbiT, at 1,522,293 to 1,523,888 _01457 MPMX20_01458: MPMX20_01458 - hypothetical protein, at 1,523,965 to 1,526,328 _01458 MPMX20_01459: MPMX20_01459 - Hexuronate transporter, at 1,526,346 to 1,527,647 _01459 Position (kb) 1523 1524 1525 1526 1527Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1522.967 kb on + strand, within MPMX20_01457at 1522.970 kb on - strand, within MPMX20_01457at 1523.012 kb on + strand, within MPMX20_01457at 1523.090 kb on + strand, within MPMX20_01457at 1523.136 kb on + strand, within MPMX20_01457at 1523.187 kb on + strand, within MPMX20_01457at 1523.237 kb on + strand, within MPMX20_01457at 1523.303 kb on + strand, within MPMX20_01457at 1523.368 kb on - strand, within MPMX20_01457at 1523.373 kb on - strand, within MPMX20_01457at 1523.390 kb on - strand, within MPMX20_01457at 1523.415 kb on + strand, within MPMX20_01457at 1523.474 kb on - strand, within MPMX20_01457at 1523.501 kb on - strand, within MPMX20_01457at 1523.588 kb on + strand, within MPMX20_01457at 1523.718 kb on + strand, within MPMX20_01457at 1523.796 kb on - strandat 1523.796 kb on - strandat 1523.958 kb on + strandat 1523.962 kb on + strandat 1524.115 kb on + strandat 1524.132 kb on + strandat 1524.137 kb on + strandat 1524.225 kb on + strand, within MPMX20_01458at 1524.256 kb on - strand, within MPMX20_01458at 1524.282 kb on + strand, within MPMX20_01458at 1524.529 kb on + strand, within MPMX20_01458at 1524.570 kb on + strand, within MPMX20_01458at 1524.572 kb on + strand, within MPMX20_01458at 1524.578 kb on - strand, within MPMX20_01458at 1524.578 kb on - strand, within MPMX20_01458at 1524.580 kb on - strand, within MPMX20_01458at 1524.580 kb on - strand, within MPMX20_01458at 1524.580 kb on - strand, within MPMX20_01458at 1524.654 kb on + strand, within MPMX20_01458at 1524.662 kb on - strand, within MPMX20_01458at 1524.666 kb on + strand, within MPMX20_01458at 1524.680 kb on - strand, within MPMX20_01458at 1524.720 kb on - strand, within MPMX20_01458at 1524.743 kb on - strand, within MPMX20_01458at 1524.743 kb on - strand, within MPMX20_01458at 1524.782 kb on + strand, within MPMX20_01458at 1524.790 kb on - strand, within MPMX20_01458at 1524.792 kb on + strand, within MPMX20_01458at 1524.856 kb on + strand, within MPMX20_01458at 1524.964 kb on + strand, within MPMX20_01458at 1525.034 kb on - strand, within MPMX20_01458at 1525.075 kb on + strand, within MPMX20_01458at 1525.083 kb on - strand, within MPMX20_01458at 1525.088 kb on - strand, within MPMX20_01458at 1525.115 kb on - strand, within MPMX20_01458at 1525.278 kb on + strand, within MPMX20_01458at 1525.278 kb on + strand, within MPMX20_01458at 1525.291 kb on - strand, within MPMX20_01458at 1525.310 kb on - strand, within MPMX20_01458at 1525.310 kb on - strand, within MPMX20_01458at 1525.311 kb on - strand, within MPMX20_01458at 1525.325 kb on + strand, within MPMX20_01458at 1525.331 kb on + strand, within MPMX20_01458at 1525.337 kb on + strand, within MPMX20_01458at 1525.414 kb on - strand, within MPMX20_01458at 1525.432 kb on + strand, within MPMX20_01458at 1525.438 kb on + strand, within MPMX20_01458at 1525.455 kb on + strand, within MPMX20_01458at 1525.463 kb on + strand, within MPMX20_01458at 1525.499 kb on + strand, within MPMX20_01458at 1525.507 kb on - strand, within MPMX20_01458at 1525.576 kb on + strand, within MPMX20_01458at 1525.705 kb on + strand, within MPMX20_01458at 1525.713 kb on - strand, within MPMX20_01458at 1525.732 kb on + strand, within MPMX20_01458at 1525.757 kb on - strand, within MPMX20_01458at 1525.885 kb on - strand, within MPMX20_01458at 1525.893 kb on - strand, within MPMX20_01458at 1525.895 kb on - strand, within MPMX20_01458at 1525.989 kb on - strand, within MPMX20_01458at 1526.104 kb on + strandat 1526.104 kb on + strandat 1526.128 kb on + strandat 1526.168 kb on + strandat 1526.218 kb on + strandat 1526.268 kb on - strandat 1526.295 kb on + strandat 1526.405 kb on + strandat 1526.413 kb on - strandat 1526.435 kb on + strandat 1526.667 kb on - strand, within MPMX20_01459at 1526.700 kb on - strand, within MPMX20_01459at 1526.700 kb on - strand, within MPMX20_01459at 1526.717 kb on - strand, within MPMX20_01459at 1526.772 kb on + strand, within MPMX20_01459at 1526.778 kb on - strand, within MPMX20_01459at 1526.868 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.878 kb on + strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.886 kb on - strand, within MPMX20_01459at 1526.925 kb on - strand, within MPMX20_01459at 1526.986 kb on + strand, within MPMX20_01459at 1526.986 kb on + strand, within MPMX20_01459at 1526.994 kb on - strand, within MPMX20_01459at 1527.024 kb on - strand, within MPMX20_01459at 1527.046 kb on - strand, within MPMX20_01459at 1527.073 kb on + strand, within MPMX20_01459at 1527.073 kb on + strand, within MPMX20_01459at 1527.073 kb on + strand, within MPMX20_01459at 1527.081 kb on - strand, within MPMX20_01459at 1527.180 kb on + strand, within MPMX20_01459at 1527.289 kb on - strand, within MPMX20_01459at 1527.308 kb on - strand, within MPMX20_01459

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
remove
1,522,967 + MPMX20_01457 0.42 -2.1
1,522,970 - MPMX20_01457 0.42 +0.1
1,523,012 + MPMX20_01457 0.45 +0.3
1,523,090 + MPMX20_01457 0.50 +1.1
1,523,136 + MPMX20_01457 0.53 -0.5
1,523,187 + MPMX20_01457 0.56 -0.6
1,523,237 + MPMX20_01457 0.59 -2.7
1,523,303 + MPMX20_01457 0.63 -0.8
1,523,368 - MPMX20_01457 0.67 -0.0
1,523,373 - MPMX20_01457 0.68 -0.5
1,523,390 - MPMX20_01457 0.69 -0.7
1,523,415 + MPMX20_01457 0.70 -0.7
1,523,474 - MPMX20_01457 0.74 +1.6
1,523,501 - MPMX20_01457 0.76 -0.1
1,523,588 + MPMX20_01457 0.81 -0.3
1,523,718 + MPMX20_01457 0.89 -0.5
1,523,796 - +0.2
1,523,796 - -0.1
1,523,958 + +0.9
1,523,962 + +0.3
1,524,115 + -0.1
1,524,132 + +1.1
1,524,137 + -0.7
1,524,225 + MPMX20_01458 0.11 -0.1
1,524,256 - MPMX20_01458 0.12 -0.2
1,524,282 + MPMX20_01458 0.13 -0.6
1,524,529 + MPMX20_01458 0.24 -0.1
1,524,570 + MPMX20_01458 0.26 -0.4
1,524,572 + MPMX20_01458 0.26 -1.4
1,524,578 - MPMX20_01458 0.26 +0.0
1,524,578 - MPMX20_01458 0.26 +0.6
1,524,580 - MPMX20_01458 0.26 +0.3
1,524,580 - MPMX20_01458 0.26 -0.5
1,524,580 - MPMX20_01458 0.26 +0.1
1,524,654 + MPMX20_01458 0.29 +0.1
1,524,662 - MPMX20_01458 0.29 +1.1
1,524,666 + MPMX20_01458 0.30 +1.4
1,524,680 - MPMX20_01458 0.30 +0.4
1,524,720 - MPMX20_01458 0.32 +0.2
1,524,743 - MPMX20_01458 0.33 +0.1
1,524,743 - MPMX20_01458 0.33 -0.4
1,524,782 + MPMX20_01458 0.35 +0.4
1,524,790 - MPMX20_01458 0.35 -0.3
1,524,792 + MPMX20_01458 0.35 -0.0
1,524,856 + MPMX20_01458 0.38 +0.7
1,524,964 + MPMX20_01458 0.42 +0.7
1,525,034 - MPMX20_01458 0.45 +0.3
1,525,075 + MPMX20_01458 0.47 -2.8
1,525,083 - MPMX20_01458 0.47 +0.3
1,525,088 - MPMX20_01458 0.48 -0.1
1,525,115 - MPMX20_01458 0.49 +0.7
1,525,278 + MPMX20_01458 0.56 +0.1
1,525,278 + MPMX20_01458 0.56 -0.2
1,525,291 - MPMX20_01458 0.56 -0.0
1,525,310 - MPMX20_01458 0.57 -0.1
1,525,310 - MPMX20_01458 0.57 -0.2
1,525,311 - MPMX20_01458 0.57 -0.2
1,525,325 + MPMX20_01458 0.58 -0.3
1,525,331 + MPMX20_01458 0.58 +0.1
1,525,337 + MPMX20_01458 0.58 +1.5
1,525,414 - MPMX20_01458 0.61 +0.9
1,525,432 + MPMX20_01458 0.62 -0.7
1,525,438 + MPMX20_01458 0.62 +0.3
1,525,455 + MPMX20_01458 0.63 +0.6
1,525,463 + MPMX20_01458 0.63 +1.0
1,525,499 + MPMX20_01458 0.65 -0.4
1,525,507 - MPMX20_01458 0.65 -0.8
1,525,576 + MPMX20_01458 0.68 +0.1
1,525,705 + MPMX20_01458 0.74 -1.8
1,525,713 - MPMX20_01458 0.74 -0.8
1,525,732 + MPMX20_01458 0.75 +0.2
1,525,757 - MPMX20_01458 0.76 +1.3
1,525,885 - MPMX20_01458 0.81 -0.1
1,525,893 - MPMX20_01458 0.82 -0.1
1,525,895 - MPMX20_01458 0.82 -0.3
1,525,989 - MPMX20_01458 0.86 -0.7
1,526,104 + -0.1
1,526,104 + +0.4
1,526,128 + -0.1
1,526,168 + -1.4
1,526,218 + +0.3
1,526,268 - -0.0
1,526,295 + -0.3
1,526,405 + -0.9
1,526,413 - +0.2
1,526,435 + +0.0
1,526,667 - MPMX20_01459 0.25 -0.1
1,526,700 - MPMX20_01459 0.27 -1.3
1,526,700 - MPMX20_01459 0.27 -0.2
1,526,717 - MPMX20_01459 0.28 +1.4
1,526,772 + MPMX20_01459 0.33 -0.4
1,526,778 - MPMX20_01459 0.33 -1.0
1,526,868 + MPMX20_01459 0.40 +0.3
1,526,878 + MPMX20_01459 0.41 -0.1
1,526,878 + MPMX20_01459 0.41 +0.2
1,526,878 + MPMX20_01459 0.41 +0.1
1,526,878 + MPMX20_01459 0.41 -0.3
1,526,878 + MPMX20_01459 0.41 +0.7
1,526,878 + MPMX20_01459 0.41 +0.6
1,526,886 - MPMX20_01459 0.41 +0.1
1,526,886 - MPMX20_01459 0.41 -0.0
1,526,886 - MPMX20_01459 0.41 -0.6
1,526,886 - MPMX20_01459 0.41 +0.2
1,526,925 - MPMX20_01459 0.44 -0.4
1,526,986 + MPMX20_01459 0.49 +2.1
1,526,986 + MPMX20_01459 0.49 -2.1
1,526,994 - MPMX20_01459 0.50 -0.5
1,527,024 - MPMX20_01459 0.52 -0.1
1,527,046 - MPMX20_01459 0.54 -0.5
1,527,073 + MPMX20_01459 0.56 -1.1
1,527,073 + MPMX20_01459 0.56 -0.3
1,527,073 + MPMX20_01459 0.56 -0.2
1,527,081 - MPMX20_01459 0.56 -0.4
1,527,180 + MPMX20_01459 0.64 +0.3
1,527,289 - MPMX20_01459 0.72 -0.1
1,527,308 - MPMX20_01459 0.74 -0.2

Or see this region's nucleotide sequence