Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01457 and MPMX20_01458 are separated by 76 nucleotides MPMX20_01458 and MPMX20_01459 are separated by 17 nucleotides
MPMX20_01457: MPMX20_01457 - putative ABC transporter ATP-binding protein YbiT, at 1,522,293 to 1,523,888
_01457
MPMX20_01458: MPMX20_01458 - hypothetical protein, at 1,523,965 to 1,526,328
_01458
MPMX20_01459: MPMX20_01459 - Hexuronate transporter, at 1,526,346 to 1,527,647
_01459
Position (kb)
1523
1524
1525
1526
1527 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1522.967 kb on + strand, within MPMX20_01457 at 1522.970 kb on - strand, within MPMX20_01457 at 1523.012 kb on + strand, within MPMX20_01457 at 1523.090 kb on + strand, within MPMX20_01457 at 1523.136 kb on + strand, within MPMX20_01457 at 1523.187 kb on + strand, within MPMX20_01457 at 1523.237 kb on + strand, within MPMX20_01457 at 1523.303 kb on + strand, within MPMX20_01457 at 1523.368 kb on - strand, within MPMX20_01457 at 1523.373 kb on - strand, within MPMX20_01457 at 1523.390 kb on - strand, within MPMX20_01457 at 1523.415 kb on + strand, within MPMX20_01457 at 1523.474 kb on - strand, within MPMX20_01457 at 1523.501 kb on - strand, within MPMX20_01457 at 1523.588 kb on + strand, within MPMX20_01457 at 1523.718 kb on + strand, within MPMX20_01457 at 1523.796 kb on - strand at 1523.796 kb on - strand at 1523.958 kb on + strand at 1523.962 kb on + strand at 1524.115 kb on + strand at 1524.132 kb on + strand at 1524.137 kb on + strand at 1524.225 kb on + strand, within MPMX20_01458 at 1524.256 kb on - strand, within MPMX20_01458 at 1524.282 kb on + strand, within MPMX20_01458 at 1524.529 kb on + strand, within MPMX20_01458 at 1524.570 kb on + strand, within MPMX20_01458 at 1524.572 kb on + strand, within MPMX20_01458 at 1524.578 kb on - strand, within MPMX20_01458 at 1524.578 kb on - strand, within MPMX20_01458 at 1524.580 kb on - strand, within MPMX20_01458 at 1524.580 kb on - strand, within MPMX20_01458 at 1524.580 kb on - strand, within MPMX20_01458 at 1524.654 kb on + strand, within MPMX20_01458 at 1524.662 kb on - strand, within MPMX20_01458 at 1524.666 kb on + strand, within MPMX20_01458 at 1524.680 kb on - strand, within MPMX20_01458 at 1524.720 kb on - strand, within MPMX20_01458 at 1524.743 kb on - strand, within MPMX20_01458 at 1524.743 kb on - strand, within MPMX20_01458 at 1524.782 kb on + strand, within MPMX20_01458 at 1524.790 kb on - strand, within MPMX20_01458 at 1524.792 kb on + strand, within MPMX20_01458 at 1524.856 kb on + strand, within MPMX20_01458 at 1524.964 kb on + strand, within MPMX20_01458 at 1525.034 kb on - strand, within MPMX20_01458 at 1525.075 kb on + strand, within MPMX20_01458 at 1525.083 kb on - strand, within MPMX20_01458 at 1525.088 kb on - strand, within MPMX20_01458 at 1525.115 kb on - strand, within MPMX20_01458 at 1525.278 kb on + strand, within MPMX20_01458 at 1525.278 kb on + strand, within MPMX20_01458 at 1525.291 kb on - strand, within MPMX20_01458 at 1525.310 kb on - strand, within MPMX20_01458 at 1525.310 kb on - strand, within MPMX20_01458 at 1525.311 kb on - strand, within MPMX20_01458 at 1525.325 kb on + strand, within MPMX20_01458 at 1525.331 kb on + strand, within MPMX20_01458 at 1525.337 kb on + strand, within MPMX20_01458 at 1525.414 kb on - strand, within MPMX20_01458 at 1525.432 kb on + strand, within MPMX20_01458 at 1525.438 kb on + strand, within MPMX20_01458 at 1525.455 kb on + strand, within MPMX20_01458 at 1525.463 kb on + strand, within MPMX20_01458 at 1525.499 kb on + strand, within MPMX20_01458 at 1525.507 kb on - strand, within MPMX20_01458 at 1525.576 kb on + strand, within MPMX20_01458 at 1525.705 kb on + strand, within MPMX20_01458 at 1525.713 kb on - strand, within MPMX20_01458 at 1525.732 kb on + strand, within MPMX20_01458 at 1525.757 kb on - strand, within MPMX20_01458 at 1525.885 kb on - strand, within MPMX20_01458 at 1525.893 kb on - strand, within MPMX20_01458 at 1525.895 kb on - strand, within MPMX20_01458 at 1525.989 kb on - strand, within MPMX20_01458 at 1526.104 kb on + strand at 1526.104 kb on + strand at 1526.128 kb on + strand at 1526.168 kb on + strand at 1526.218 kb on + strand at 1526.268 kb on - strand at 1526.295 kb on + strand at 1526.405 kb on + strand at 1526.413 kb on - strand at 1526.435 kb on + strand at 1526.667 kb on - strand, within MPMX20_01459 at 1526.700 kb on - strand, within MPMX20_01459 at 1526.700 kb on - strand, within MPMX20_01459 at 1526.717 kb on - strand, within MPMX20_01459 at 1526.772 kb on + strand, within MPMX20_01459 at 1526.778 kb on - strand, within MPMX20_01459 at 1526.868 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.878 kb on + strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.886 kb on - strand, within MPMX20_01459 at 1526.925 kb on - strand, within MPMX20_01459 at 1526.986 kb on + strand, within MPMX20_01459 at 1526.986 kb on + strand, within MPMX20_01459 at 1526.994 kb on - strand, within MPMX20_01459 at 1527.024 kb on - strand, within MPMX20_01459 at 1527.046 kb on - strand, within MPMX20_01459 at 1527.073 kb on + strand, within MPMX20_01459 at 1527.073 kb on + strand, within MPMX20_01459 at 1527.073 kb on + strand, within MPMX20_01459 at 1527.081 kb on - strand, within MPMX20_01459 at 1527.180 kb on + strand, within MPMX20_01459 at 1527.289 kb on - strand, within MPMX20_01459 at 1527.308 kb on - strand, within MPMX20_01459
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 1,522,967 + MPMX20_01457 0.42 -2.1 1,522,970 - MPMX20_01457 0.42 +0.1 1,523,012 + MPMX20_01457 0.45 +0.3 1,523,090 + MPMX20_01457 0.50 +1.1 1,523,136 + MPMX20_01457 0.53 -0.5 1,523,187 + MPMX20_01457 0.56 -0.6 1,523,237 + MPMX20_01457 0.59 -2.7 1,523,303 + MPMX20_01457 0.63 -0.8 1,523,368 - MPMX20_01457 0.67 -0.0 1,523,373 - MPMX20_01457 0.68 -0.5 1,523,390 - MPMX20_01457 0.69 -0.7 1,523,415 + MPMX20_01457 0.70 -0.7 1,523,474 - MPMX20_01457 0.74 +1.6 1,523,501 - MPMX20_01457 0.76 -0.1 1,523,588 + MPMX20_01457 0.81 -0.3 1,523,718 + MPMX20_01457 0.89 -0.5 1,523,796 - +0.2 1,523,796 - -0.1 1,523,958 + +0.9 1,523,962 + +0.3 1,524,115 + -0.1 1,524,132 + +1.1 1,524,137 + -0.7 1,524,225 + MPMX20_01458 0.11 -0.1 1,524,256 - MPMX20_01458 0.12 -0.2 1,524,282 + MPMX20_01458 0.13 -0.6 1,524,529 + MPMX20_01458 0.24 -0.1 1,524,570 + MPMX20_01458 0.26 -0.4 1,524,572 + MPMX20_01458 0.26 -1.4 1,524,578 - MPMX20_01458 0.26 +0.0 1,524,578 - MPMX20_01458 0.26 +0.6 1,524,580 - MPMX20_01458 0.26 +0.3 1,524,580 - MPMX20_01458 0.26 -0.5 1,524,580 - MPMX20_01458 0.26 +0.1 1,524,654 + MPMX20_01458 0.29 +0.1 1,524,662 - MPMX20_01458 0.29 +1.1 1,524,666 + MPMX20_01458 0.30 +1.4 1,524,680 - MPMX20_01458 0.30 +0.4 1,524,720 - MPMX20_01458 0.32 +0.2 1,524,743 - MPMX20_01458 0.33 +0.1 1,524,743 - MPMX20_01458 0.33 -0.4 1,524,782 + MPMX20_01458 0.35 +0.4 1,524,790 - MPMX20_01458 0.35 -0.3 1,524,792 + MPMX20_01458 0.35 -0.0 1,524,856 + MPMX20_01458 0.38 +0.7 1,524,964 + MPMX20_01458 0.42 +0.7 1,525,034 - MPMX20_01458 0.45 +0.3 1,525,075 + MPMX20_01458 0.47 -2.8 1,525,083 - MPMX20_01458 0.47 +0.3 1,525,088 - MPMX20_01458 0.48 -0.1 1,525,115 - MPMX20_01458 0.49 +0.7 1,525,278 + MPMX20_01458 0.56 +0.1 1,525,278 + MPMX20_01458 0.56 -0.2 1,525,291 - MPMX20_01458 0.56 -0.0 1,525,310 - MPMX20_01458 0.57 -0.1 1,525,310 - MPMX20_01458 0.57 -0.2 1,525,311 - MPMX20_01458 0.57 -0.2 1,525,325 + MPMX20_01458 0.58 -0.3 1,525,331 + MPMX20_01458 0.58 +0.1 1,525,337 + MPMX20_01458 0.58 +1.5 1,525,414 - MPMX20_01458 0.61 +0.9 1,525,432 + MPMX20_01458 0.62 -0.7 1,525,438 + MPMX20_01458 0.62 +0.3 1,525,455 + MPMX20_01458 0.63 +0.6 1,525,463 + MPMX20_01458 0.63 +1.0 1,525,499 + MPMX20_01458 0.65 -0.4 1,525,507 - MPMX20_01458 0.65 -0.8 1,525,576 + MPMX20_01458 0.68 +0.1 1,525,705 + MPMX20_01458 0.74 -1.8 1,525,713 - MPMX20_01458 0.74 -0.8 1,525,732 + MPMX20_01458 0.75 +0.2 1,525,757 - MPMX20_01458 0.76 +1.3 1,525,885 - MPMX20_01458 0.81 -0.1 1,525,893 - MPMX20_01458 0.82 -0.1 1,525,895 - MPMX20_01458 0.82 -0.3 1,525,989 - MPMX20_01458 0.86 -0.7 1,526,104 + -0.1 1,526,104 + +0.4 1,526,128 + -0.1 1,526,168 + -1.4 1,526,218 + +0.3 1,526,268 - -0.0 1,526,295 + -0.3 1,526,405 + -0.9 1,526,413 - +0.2 1,526,435 + +0.0 1,526,667 - MPMX20_01459 0.25 -0.1 1,526,700 - MPMX20_01459 0.27 -1.3 1,526,700 - MPMX20_01459 0.27 -0.2 1,526,717 - MPMX20_01459 0.28 +1.4 1,526,772 + MPMX20_01459 0.33 -0.4 1,526,778 - MPMX20_01459 0.33 -1.0 1,526,868 + MPMX20_01459 0.40 +0.3 1,526,878 + MPMX20_01459 0.41 -0.1 1,526,878 + MPMX20_01459 0.41 +0.2 1,526,878 + MPMX20_01459 0.41 +0.1 1,526,878 + MPMX20_01459 0.41 -0.3 1,526,878 + MPMX20_01459 0.41 +0.7 1,526,878 + MPMX20_01459 0.41 +0.6 1,526,886 - MPMX20_01459 0.41 +0.1 1,526,886 - MPMX20_01459 0.41 -0.0 1,526,886 - MPMX20_01459 0.41 -0.6 1,526,886 - MPMX20_01459 0.41 +0.2 1,526,925 - MPMX20_01459 0.44 -0.4 1,526,986 + MPMX20_01459 0.49 +2.1 1,526,986 + MPMX20_01459 0.49 -2.1 1,526,994 - MPMX20_01459 0.50 -0.5 1,527,024 - MPMX20_01459 0.52 -0.1 1,527,046 - MPMX20_01459 0.54 -0.5 1,527,073 + MPMX20_01459 0.56 -1.1 1,527,073 + MPMX20_01459 0.56 -0.3 1,527,073 + MPMX20_01459 0.56 -0.2 1,527,081 - MPMX20_01459 0.56 -0.4 1,527,180 + MPMX20_01459 0.64 +0.3 1,527,289 - MPMX20_01459 0.72 -0.1 1,527,308 - MPMX20_01459 0.74 -0.2
Or see this region's nucleotide sequence