Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00251

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00250 and MPMX20_00251 are separated by 66 nucleotidesMPMX20_00251 and MPMX20_00252 are separated by 372 nucleotides MPMX20_00250: MPMX20_00250 - Maltose/maltodextrin transport system permease protein MalF, at 266,259 to 267,803 _00250 MPMX20_00251: MPMX20_00251 - Maltose/maltodextrin-binding periplasmic protein, at 267,870 to 269,060 _00251 MPMX20_00252: MPMX20_00252 - Maltose/maltodextrin import ATP-binding protein MalK, at 269,433 to 270,542 _00252 Position (kb) 267 268 269 270Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 266.885 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.895 kb on + strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 266.903 kb on - strand, within MPMX20_00250at 267.037 kb on + strand, within MPMX20_00250at 267.037 kb on + strand, within MPMX20_00250at 267.037 kb on + strand, within MPMX20_00250at 267.045 kb on - strand, within MPMX20_00250at 267.122 kb on + strand, within MPMX20_00250at 267.122 kb on + strand, within MPMX20_00250at 267.122 kb on + strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.130 kb on - strand, within MPMX20_00250at 267.211 kb on - strand, within MPMX20_00250at 267.272 kb on + strand, within MPMX20_00250at 267.272 kb on + strand, within MPMX20_00250at 267.272 kb on + strand, within MPMX20_00250at 267.280 kb on - strand, within MPMX20_00250at 267.287 kb on + strand, within MPMX20_00250at 267.301 kb on + strand, within MPMX20_00250at 267.301 kb on + strand, within MPMX20_00250at 267.301 kb on + strand, within MPMX20_00250at 267.320 kb on - strand, within MPMX20_00250at 267.435 kb on - strand, within MPMX20_00250at 267.458 kb on + strand, within MPMX20_00250at 267.469 kb on - strand, within MPMX20_00250at 267.474 kb on - strand, within MPMX20_00250at 267.480 kb on + strand, within MPMX20_00250at 267.522 kb on - strand, within MPMX20_00250at 267.542 kb on + strand, within MPMX20_00250at 267.583 kb on - strand, within MPMX20_00250at 267.619 kb on + strand, within MPMX20_00250at 267.619 kb on + strand, within MPMX20_00250at 267.619 kb on + strand, within MPMX20_00250at 267.619 kb on + strand, within MPMX20_00250at 267.620 kb on - strand, within MPMX20_00250at 267.627 kb on - strand, within MPMX20_00250at 267.627 kb on - strand, within MPMX20_00250at 267.644 kb on + strand, within MPMX20_00250at 267.644 kb on + strand, within MPMX20_00250at 267.652 kb on - strandat 267.652 kb on - strandat 267.663 kb on - strandat 267.691 kb on + strandat 267.710 kb on - strandat 267.723 kb on - strandat 267.754 kb on - strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.756 kb on + strandat 267.764 kb on - strandat 267.764 kb on - strandat 267.764 kb on - strandat 267.764 kb on - strandat 267.764 kb on - strandat 267.764 kb on - strandat 267.822 kb on - strandat 267.833 kb on + strandat 267.843 kb on - strandat 267.843 kb on - strandat 267.858 kb on - strandat 267.859 kb on + strandat 267.867 kb on + strandat 267.885 kb on + strandat 267.885 kb on + strandat 267.892 kb on + strandat 267.893 kb on - strandat 267.893 kb on - strandat 267.915 kb on - strandat 267.915 kb on - strandat 267.925 kb on - strandat 267.939 kb on + strandat 268.182 kb on + strand, within MPMX20_00251at 268.190 kb on - strand, within MPMX20_00251at 268.190 kb on - strand, within MPMX20_00251at 268.206 kb on + strand, within MPMX20_00251at 268.245 kb on - strand, within MPMX20_00251at 268.247 kb on + strand, within MPMX20_00251at 268.247 kb on + strand, within MPMX20_00251at 268.247 kb on + strand, within MPMX20_00251at 268.247 kb on + strand, within MPMX20_00251at 268.247 kb on + strand, within MPMX20_00251at 268.255 kb on - strand, within MPMX20_00251at 268.255 kb on - strand, within MPMX20_00251at 268.255 kb on - strand, within MPMX20_00251at 268.351 kb on + strand, within MPMX20_00251at 268.364 kb on - strand, within MPMX20_00251at 268.404 kb on + strand, within MPMX20_00251at 268.414 kb on + strand, within MPMX20_00251at 268.431 kb on + strand, within MPMX20_00251at 268.431 kb on + strand, within MPMX20_00251at 268.582 kb on + strand, within MPMX20_00251at 268.592 kb on + strand, within MPMX20_00251at 268.600 kb on - strand, within MPMX20_00251at 268.622 kb on + strand, within MPMX20_00251at 268.632 kb on - strand, within MPMX20_00251at 268.697 kb on + strand, within MPMX20_00251at 268.755 kb on - strand, within MPMX20_00251at 268.760 kb on + strand, within MPMX20_00251at 268.763 kb on - strand, within MPMX20_00251at 268.803 kb on + strand, within MPMX20_00251at 268.831 kb on + strand, within MPMX20_00251at 268.929 kb on + strand, within MPMX20_00251at 268.929 kb on + strand, within MPMX20_00251at 268.937 kb on - strand, within MPMX20_00251at 268.937 kb on - strand, within MPMX20_00251at 269.012 kb on - strandat 269.047 kb on + strandat 269.096 kb on + strandat 269.105 kb on - strandat 269.151 kb on + strandat 269.160 kb on - strandat 269.166 kb on - strandat 269.215 kb on - strandat 269.284 kb on - strandat 269.370 kb on + strandat 269.410 kb on + strandat 269.424 kb on + strandat 269.437 kb on - strandat 269.440 kb on + strandat 269.440 kb on + strandat 269.440 kb on + strandat 269.440 kb on + strandat 269.448 kb on - strandat 269.448 kb on - strandat 269.448 kb on - strandat 269.448 kb on - strandat 269.448 kb on - strandat 269.448 kb on - strandat 269.458 kb on - strandat 269.473 kb on - strandat 269.479 kb on - strandat 269.525 kb on - strandat 269.570 kb on - strand, within MPMX20_00252at 269.594 kb on - strand, within MPMX20_00252at 269.619 kb on + strand, within MPMX20_00252at 269.665 kb on + strand, within MPMX20_00252at 269.686 kb on - strand, within MPMX20_00252at 269.692 kb on + strand, within MPMX20_00252at 269.692 kb on + strand, within MPMX20_00252at 269.699 kb on + strand, within MPMX20_00252at 269.700 kb on - strand, within MPMX20_00252at 269.700 kb on - strand, within MPMX20_00252at 269.709 kb on + strand, within MPMX20_00252at 269.773 kb on + strand, within MPMX20_00252at 269.818 kb on - strand, within MPMX20_00252at 269.866 kb on + strand, within MPMX20_00252at 269.874 kb on - strand, within MPMX20_00252at 269.976 kb on + strand, within MPMX20_00252at 270.014 kb on + strand, within MPMX20_00252at 270.022 kb on - strand, within MPMX20_00252

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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266,885 + MPMX20_00250 0.41 +1.7
266,895 + MPMX20_00250 0.41 -1.7
266,895 + MPMX20_00250 0.41 +1.6
266,895 + MPMX20_00250 0.41 +0.7
266,895 + MPMX20_00250 0.41 +0.7
266,895 + MPMX20_00250 0.41 +0.8
266,903 - MPMX20_00250 0.42 +1.0
266,903 - MPMX20_00250 0.42 +0.3
266,903 - MPMX20_00250 0.42 -0.1
266,903 - MPMX20_00250 0.42 +0.3
267,037 + MPMX20_00250 0.50 -0.7
267,037 + MPMX20_00250 0.50 -1.1
267,037 + MPMX20_00250 0.50 +0.7
267,045 - MPMX20_00250 0.51 -0.1
267,122 + MPMX20_00250 0.56 -1.3
267,122 + MPMX20_00250 0.56 -0.8
267,122 + MPMX20_00250 0.56 -0.7
267,130 - MPMX20_00250 0.56 +0.1
267,130 - MPMX20_00250 0.56 +0.1
267,130 - MPMX20_00250 0.56 -0.1
267,130 - MPMX20_00250 0.56 +1.0
267,211 - MPMX20_00250 0.62 -0.1
267,272 + MPMX20_00250 0.66 -0.5
267,272 + MPMX20_00250 0.66 +0.4
267,272 + MPMX20_00250 0.66 +0.2
267,280 - MPMX20_00250 0.66 +0.5
267,287 + MPMX20_00250 0.67 +0.0
267,301 + MPMX20_00250 0.67 -0.3
267,301 + MPMX20_00250 0.67 -0.9
267,301 + MPMX20_00250 0.67 +0.2
267,320 - MPMX20_00250 0.69 -0.0
267,435 - MPMX20_00250 0.76 -1.8
267,458 + MPMX20_00250 0.78 +0.3
267,469 - MPMX20_00250 0.78 -0.2
267,474 - MPMX20_00250 0.79 +0.2
267,480 + MPMX20_00250 0.79 -0.0
267,522 - MPMX20_00250 0.82 -0.2
267,542 + MPMX20_00250 0.83 -0.0
267,583 - MPMX20_00250 0.86 -0.1
267,619 + MPMX20_00250 0.88 -0.6
267,619 + MPMX20_00250 0.88 -0.9
267,619 + MPMX20_00250 0.88 +0.3
267,619 + MPMX20_00250 0.88 +0.0
267,620 - MPMX20_00250 0.88 +1.0
267,627 - MPMX20_00250 0.89 -0.2
267,627 - MPMX20_00250 0.89 +0.1
267,644 + MPMX20_00250 0.90 -0.3
267,644 + MPMX20_00250 0.90 -0.5
267,652 - -0.1
267,652 - -1.5
267,663 - -1.2
267,691 + -0.6
267,710 - -2.5
267,723 - +1.7
267,754 - +0.1
267,756 + -0.8
267,756 + -0.5
267,756 + -0.3
267,756 + -1.5
267,756 + -0.4
267,756 + -1.3
267,756 + -1.1
267,756 + +0.7
267,756 + -0.9
267,756 + -0.8
267,756 + +1.7
267,756 + +0.2
267,764 - +0.1
267,764 - -0.5
267,764 - -1.3
267,764 - -0.9
267,764 - +0.7
267,764 - -1.0
267,822 - +0.3
267,833 + -0.3
267,843 - +0.2
267,843 - -0.2
267,858 - -0.5
267,859 + +0.0
267,867 + -0.2
267,885 + +0.5
267,885 + +0.3
267,892 + -0.2
267,893 - -0.4
267,893 - -0.4
267,915 - -0.3
267,915 - -0.2
267,925 - +0.8
267,939 + -0.0
268,182 + MPMX20_00251 0.26 -0.5
268,190 - MPMX20_00251 0.27 +0.3
268,190 - MPMX20_00251 0.27 -0.2
268,206 + MPMX20_00251 0.28 -1.8
268,245 - MPMX20_00251 0.31 -0.8
268,247 + MPMX20_00251 0.32 +0.7
268,247 + MPMX20_00251 0.32 -0.7
268,247 + MPMX20_00251 0.32 +0.1
268,247 + MPMX20_00251 0.32 -0.1
268,247 + MPMX20_00251 0.32 -0.2
268,255 - MPMX20_00251 0.32 -2.2
268,255 - MPMX20_00251 0.32 -0.8
268,255 - MPMX20_00251 0.32 +0.2
268,351 + MPMX20_00251 0.40 -1.0
268,364 - MPMX20_00251 0.41 +0.0
268,404 + MPMX20_00251 0.45 +1.3
268,414 + MPMX20_00251 0.46 -1.5
268,431 + MPMX20_00251 0.47 -0.0
268,431 + MPMX20_00251 0.47 +1.5
268,582 + MPMX20_00251 0.60 +0.7
268,592 + MPMX20_00251 0.61 -0.2
268,600 - MPMX20_00251 0.61 -0.4
268,622 + MPMX20_00251 0.63 +2.0
268,632 - MPMX20_00251 0.64 +0.2
268,697 + MPMX20_00251 0.69 +0.6
268,755 - MPMX20_00251 0.74 +0.7
268,760 + MPMX20_00251 0.75 +2.0
268,763 - MPMX20_00251 0.75 -1.2
268,803 + MPMX20_00251 0.78 +0.0
268,831 + MPMX20_00251 0.81 -0.3
268,929 + MPMX20_00251 0.89 +0.8
268,929 + MPMX20_00251 0.89 -0.3
268,937 - MPMX20_00251 0.90 -0.9
268,937 - MPMX20_00251 0.90 -0.7
269,012 - +0.3
269,047 + -0.1
269,096 + -1.1
269,105 - +0.7
269,151 + -1.5
269,160 - -0.1
269,166 - -2.0
269,215 - -0.2
269,284 - -0.5
269,370 + +0.9
269,410 + +0.2
269,424 + +0.2
269,437 - +0.7
269,440 + +2.7
269,440 + -0.1
269,440 + +0.0
269,440 + +0.1
269,448 - -2.8
269,448 - -1.0
269,448 - -2.0
269,448 - -2.1
269,448 - -1.9
269,448 - -0.9
269,458 - -1.2
269,473 - -1.3
269,479 - +0.1
269,525 - -1.5
269,570 - MPMX20_00252 0.12 -1.4
269,594 - MPMX20_00252 0.15 +0.3
269,619 + MPMX20_00252 0.17 -1.5
269,665 + MPMX20_00252 0.21 -0.5
269,686 - MPMX20_00252 0.23 -0.6
269,692 + MPMX20_00252 0.23 +0.9
269,692 + MPMX20_00252 0.23 -0.1
269,699 + MPMX20_00252 0.24 +0.5
269,700 - MPMX20_00252 0.24 -1.4
269,700 - MPMX20_00252 0.24 -1.4
269,709 + MPMX20_00252 0.25 +0.2
269,773 + MPMX20_00252 0.31 +0.5
269,818 - MPMX20_00252 0.35 -0.4
269,866 + MPMX20_00252 0.39 +0.4
269,874 - MPMX20_00252 0.40 -1.9
269,976 + MPMX20_00252 0.49 -1.6
270,014 + MPMX20_00252 0.52 +0.5
270,022 - MPMX20_00252 0.53 -1.6

Or see this region's nucleotide sequence