Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04346

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04344 and MPMX20_04345 are separated by 129 nucleotidesMPMX20_04345 and MPMX20_04346 are separated by 76 nucleotidesMPMX20_04346 and MPMX20_04347 are separated by 42 nucleotides MPMX20_04344: MPMX20_04344 - hypothetical protein, at 4,538,460 to 4,538,819 _04344 MPMX20_04345: MPMX20_04345 - hypothetical protein, at 4,538,949 to 4,539,575 _04345 MPMX20_04346: MPMX20_04346 - Zinc/cadmium/lead-transporting P-type ATPase, at 4,539,652 to 4,541,838 _04346 MPMX20_04347: MPMX20_04347 - C4-dicarboxylate TRAP transporter large permease protein DctM, at 4,541,881 to 4,543,167 _04347 Position (kb) 4539 4540 4541 4542Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 4538.663 kb on + strand, within MPMX20_04344at 4538.690 kb on - strand, within MPMX20_04344at 4538.901 kb on - strandat 4538.941 kb on - strandat 4538.987 kb on + strandat 4538.987 kb on + strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.995 kb on - strandat 4538.997 kb on + strandat 4539.084 kb on + strand, within MPMX20_04345at 4539.089 kb on + strand, within MPMX20_04345at 4539.123 kb on + strand, within MPMX20_04345at 4539.125 kb on + strand, within MPMX20_04345at 4539.147 kb on + strand, within MPMX20_04345at 4539.148 kb on + strand, within MPMX20_04345at 4539.148 kb on + strand, within MPMX20_04345at 4539.156 kb on - strand, within MPMX20_04345at 4539.156 kb on - strand, within MPMX20_04345at 4539.156 kb on - strand, within MPMX20_04345at 4539.176 kb on + strand, within MPMX20_04345at 4539.184 kb on - strand, within MPMX20_04345at 4539.220 kb on - strand, within MPMX20_04345at 4539.281 kb on + strand, within MPMX20_04345at 4539.304 kb on - strand, within MPMX20_04345at 4539.479 kb on - strand, within MPMX20_04345at 4539.545 kb on + strandat 4539.553 kb on - strandat 4539.614 kb on - strandat 4539.787 kb on + strandat 4539.789 kb on + strandat 4539.811 kb on + strandat 4539.819 kb on - strandat 4539.819 kb on - strandat 4539.859 kb on - strandat 4539.879 kb on + strand, within MPMX20_04346at 4539.891 kb on - strand, within MPMX20_04346at 4539.907 kb on + strand, within MPMX20_04346at 4539.942 kb on + strand, within MPMX20_04346at 4539.950 kb on - strand, within MPMX20_04346at 4539.968 kb on + strand, within MPMX20_04346at 4539.968 kb on + strand, within MPMX20_04346at 4539.976 kb on - strand, within MPMX20_04346at 4540.015 kb on - strand, within MPMX20_04346at 4540.057 kb on + strand, within MPMX20_04346at 4540.057 kb on + strand, within MPMX20_04346at 4540.057 kb on + strand, within MPMX20_04346at 4540.065 kb on - strand, within MPMX20_04346at 4540.087 kb on - strand, within MPMX20_04346at 4540.107 kb on - strand, within MPMX20_04346at 4540.134 kb on + strand, within MPMX20_04346at 4540.142 kb on - strand, within MPMX20_04346at 4540.142 kb on - strand, within MPMX20_04346at 4540.200 kb on + strand, within MPMX20_04346at 4540.269 kb on - strand, within MPMX20_04346at 4540.422 kb on + strand, within MPMX20_04346at 4540.443 kb on + strand, within MPMX20_04346at 4540.574 kb on + strand, within MPMX20_04346at 4540.587 kb on - strand, within MPMX20_04346at 4540.595 kb on + strand, within MPMX20_04346at 4540.636 kb on - strand, within MPMX20_04346at 4540.666 kb on + strand, within MPMX20_04346at 4540.698 kb on + strand, within MPMX20_04346at 4540.706 kb on - strand, within MPMX20_04346at 4540.720 kb on - strand, within MPMX20_04346at 4540.768 kb on + strand, within MPMX20_04346at 4540.776 kb on - strand, within MPMX20_04346at 4540.792 kb on + strand, within MPMX20_04346at 4540.830 kb on + strand, within MPMX20_04346at 4540.838 kb on - strand, within MPMX20_04346at 4540.926 kb on - strand, within MPMX20_04346at 4541.007 kb on - strand, within MPMX20_04346at 4541.052 kb on + strand, within MPMX20_04346at 4541.082 kb on + strand, within MPMX20_04346at 4541.240 kb on - strand, within MPMX20_04346at 4541.242 kb on + strand, within MPMX20_04346at 4541.248 kb on - strand, within MPMX20_04346at 4541.283 kb on - strand, within MPMX20_04346at 4541.318 kb on - strand, within MPMX20_04346at 4541.318 kb on - strand, within MPMX20_04346at 4541.375 kb on + strand, within MPMX20_04346at 4541.375 kb on + strand, within MPMX20_04346at 4541.376 kb on - strand, within MPMX20_04346at 4541.405 kb on - strand, within MPMX20_04346at 4541.464 kb on + strand, within MPMX20_04346at 4541.464 kb on + strand, within MPMX20_04346at 4541.495 kb on + strand, within MPMX20_04346at 4541.495 kb on + strand, within MPMX20_04346at 4541.503 kb on - strand, within MPMX20_04346at 4541.503 kb on - strand, within MPMX20_04346at 4541.508 kb on + strand, within MPMX20_04346at 4541.614 kb on + strand, within MPMX20_04346at 4541.684 kb on - strandat 4541.684 kb on - strandat 4541.854 kb on + strandat 4541.855 kb on - strandat 4541.868 kb on + strandat 4541.921 kb on + strandat 4541.955 kb on + strandat 4542.022 kb on + strand, within MPMX20_04347at 4542.033 kb on + strand, within MPMX20_04347at 4542.041 kb on - strand, within MPMX20_04347at 4542.073 kb on - strand, within MPMX20_04347at 4542.080 kb on - strand, within MPMX20_04347at 4542.086 kb on - strand, within MPMX20_04347at 4542.138 kb on + strand, within MPMX20_04347at 4542.151 kb on - strand, within MPMX20_04347at 4542.158 kb on - strand, within MPMX20_04347at 4542.158 kb on - strand, within MPMX20_04347at 4542.180 kb on - strand, within MPMX20_04347at 4542.253 kb on + strand, within MPMX20_04347at 4542.286 kb on + strand, within MPMX20_04347at 4542.294 kb on - strand, within MPMX20_04347at 4542.294 kb on - strand, within MPMX20_04347at 4542.294 kb on - strand, within MPMX20_04347at 4542.317 kb on - strand, within MPMX20_04347at 4542.365 kb on + strand, within MPMX20_04347at 4542.431 kb on - strand, within MPMX20_04347at 4542.433 kb on + strand, within MPMX20_04347at 4542.436 kb on - strand, within MPMX20_04347at 4542.472 kb on - strand, within MPMX20_04347at 4542.591 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.612 kb on + strand, within MPMX20_04347at 4542.620 kb on - strand, within MPMX20_04347at 4542.620 kb on - strand, within MPMX20_04347at 4542.620 kb on - strand, within MPMX20_04347at 4542.620 kb on - strand, within MPMX20_04347at 4542.625 kb on + strand, within MPMX20_04347at 4542.630 kb on + strand, within MPMX20_04347

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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4,538,663 + MPMX20_04344 0.56 -1.7
4,538,690 - MPMX20_04344 0.64 -1.9
4,538,901 - -1.0
4,538,941 - +1.2
4,538,987 + +1.8
4,538,987 + +0.6
4,538,995 - +0.0
4,538,995 - +0.0
4,538,995 - -0.2
4,538,995 - +0.2
4,538,995 - -0.0
4,538,995 - +1.6
4,538,995 - +0.3
4,538,995 - +0.5
4,538,995 - +0.3
4,538,997 + +1.7
4,539,084 + MPMX20_04345 0.22 +0.9
4,539,089 + MPMX20_04345 0.22 -1.0
4,539,123 + MPMX20_04345 0.28 -0.7
4,539,125 + MPMX20_04345 0.28 -0.4
4,539,147 + MPMX20_04345 0.32 +0.2
4,539,148 + MPMX20_04345 0.32 +0.2
4,539,148 + MPMX20_04345 0.32 -0.5
4,539,156 - MPMX20_04345 0.33 +1.0
4,539,156 - MPMX20_04345 0.33 -1.3
4,539,156 - MPMX20_04345 0.33 +0.7
4,539,176 + MPMX20_04345 0.36 +0.4
4,539,184 - MPMX20_04345 0.37 +0.4
4,539,220 - MPMX20_04345 0.43 -0.3
4,539,281 + MPMX20_04345 0.53 +0.7
4,539,304 - MPMX20_04345 0.57 -0.4
4,539,479 - MPMX20_04345 0.85 +1.8
4,539,545 + +1.0
4,539,553 - -0.0
4,539,614 - +0.8
4,539,787 + -1.5
4,539,789 + -3.3
4,539,811 + -3.9
4,539,819 - -3.3
4,539,819 - -0.5
4,539,859 - +0.2
4,539,879 + MPMX20_04346 0.10 -2.1
4,539,891 - MPMX20_04346 0.11 -4.0
4,539,907 + MPMX20_04346 0.12 -2.5
4,539,942 + MPMX20_04346 0.13 -1.3
4,539,950 - MPMX20_04346 0.14 -1.0
4,539,968 + MPMX20_04346 0.14 -3.6
4,539,968 + MPMX20_04346 0.14 -2.1
4,539,976 - MPMX20_04346 0.15 -1.2
4,540,015 - MPMX20_04346 0.17 -2.7
4,540,057 + MPMX20_04346 0.19 -1.7
4,540,057 + MPMX20_04346 0.19 -2.6
4,540,057 + MPMX20_04346 0.19 -2.9
4,540,065 - MPMX20_04346 0.19 -2.7
4,540,087 - MPMX20_04346 0.20 -0.2
4,540,107 - MPMX20_04346 0.21 -0.2
4,540,134 + MPMX20_04346 0.22 -2.4
4,540,142 - MPMX20_04346 0.22 -2.2
4,540,142 - MPMX20_04346 0.22 -2.0
4,540,200 + MPMX20_04346 0.25 -1.3
4,540,269 - MPMX20_04346 0.28 -2.9
4,540,422 + MPMX20_04346 0.35 -1.9
4,540,443 + MPMX20_04346 0.36 -3.8
4,540,574 + MPMX20_04346 0.42 -3.0
4,540,587 - MPMX20_04346 0.43 -1.7
4,540,595 + MPMX20_04346 0.43 -1.8
4,540,636 - MPMX20_04346 0.45 -1.6
4,540,666 + MPMX20_04346 0.46 -1.6
4,540,698 + MPMX20_04346 0.48 -1.3
4,540,706 - MPMX20_04346 0.48 -0.7
4,540,720 - MPMX20_04346 0.49 -2.9
4,540,768 + MPMX20_04346 0.51 -2.8
4,540,776 - MPMX20_04346 0.51 -2.1
4,540,792 + MPMX20_04346 0.52 -2.7
4,540,830 + MPMX20_04346 0.54 -3.2
4,540,838 - MPMX20_04346 0.54 -5.1
4,540,926 - MPMX20_04346 0.58 -1.8
4,541,007 - MPMX20_04346 0.62 -2.1
4,541,052 + MPMX20_04346 0.64 -2.5
4,541,082 + MPMX20_04346 0.65 -3.1
4,541,240 - MPMX20_04346 0.73 -4.6
4,541,242 + MPMX20_04346 0.73 -1.9
4,541,248 - MPMX20_04346 0.73 -1.7
4,541,283 - MPMX20_04346 0.75 -2.5
4,541,318 - MPMX20_04346 0.76 -2.8
4,541,318 - MPMX20_04346 0.76 -2.6
4,541,375 + MPMX20_04346 0.79 -0.5
4,541,375 + MPMX20_04346 0.79 -1.7
4,541,376 - MPMX20_04346 0.79 -0.5
4,541,405 - MPMX20_04346 0.80 -0.8
4,541,464 + MPMX20_04346 0.83 -3.4
4,541,464 + MPMX20_04346 0.83 -1.3
4,541,495 + MPMX20_04346 0.84 -3.3
4,541,495 + MPMX20_04346 0.84 -1.1
4,541,503 - MPMX20_04346 0.85 -3.3
4,541,503 - MPMX20_04346 0.85 -0.2
4,541,508 + MPMX20_04346 0.85 -4.8
4,541,614 + MPMX20_04346 0.90 -3.6
4,541,684 - -3.6
4,541,684 - -2.9
4,541,854 + +0.0
4,541,855 - -0.2
4,541,868 + -0.4
4,541,921 + +0.8
4,541,955 + -0.6
4,542,022 + MPMX20_04347 0.11 +1.0
4,542,033 + MPMX20_04347 0.12 +0.2
4,542,041 - MPMX20_04347 0.12 +0.8
4,542,073 - MPMX20_04347 0.15 -0.3
4,542,080 - MPMX20_04347 0.15 +0.1
4,542,086 - MPMX20_04347 0.16 +0.3
4,542,138 + MPMX20_04347 0.20 +0.9
4,542,151 - MPMX20_04347 0.21 -0.3
4,542,158 - MPMX20_04347 0.22 -0.8
4,542,158 - MPMX20_04347 0.22 -0.2
4,542,180 - MPMX20_04347 0.23 +1.9
4,542,253 + MPMX20_04347 0.29 -0.4
4,542,286 + MPMX20_04347 0.31 +0.8
4,542,294 - MPMX20_04347 0.32 +1.1
4,542,294 - MPMX20_04347 0.32 -0.2
4,542,294 - MPMX20_04347 0.32 -0.6
4,542,317 - MPMX20_04347 0.34 -0.8
4,542,365 + MPMX20_04347 0.38 +1.0
4,542,431 - MPMX20_04347 0.43 +0.5
4,542,433 + MPMX20_04347 0.43 -1.0
4,542,436 - MPMX20_04347 0.43 -0.1
4,542,472 - MPMX20_04347 0.46 +0.1
4,542,591 + MPMX20_04347 0.55 -0.5
4,542,612 + MPMX20_04347 0.57 -1.0
4,542,612 + MPMX20_04347 0.57 -0.0
4,542,612 + MPMX20_04347 0.57 -0.2
4,542,612 + MPMX20_04347 0.57 +1.8
4,542,612 + MPMX20_04347 0.57 -0.1
4,542,612 + MPMX20_04347 0.57 -0.0
4,542,612 + MPMX20_04347 0.57 +0.2
4,542,612 + MPMX20_04347 0.57 +0.1
4,542,612 + MPMX20_04347 0.57 -0.3
4,542,612 + MPMX20_04347 0.57 +1.6
4,542,620 - MPMX20_04347 0.57 -0.3
4,542,620 - MPMX20_04347 0.57 +0.1
4,542,620 - MPMX20_04347 0.57 -2.7
4,542,620 - MPMX20_04347 0.57 -0.1
4,542,625 + MPMX20_04347 0.58 +0.1
4,542,630 + MPMX20_04347 0.58 -0.1

Or see this region's nucleotide sequence