Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04041

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04039 and MPMX20_04040 are separated by 19 nucleotidesMPMX20_04040 and MPMX20_04041 are separated by 10 nucleotidesMPMX20_04041 and MPMX20_04042 overlap by 11 nucleotidesMPMX20_04042 and MPMX20_04043 are separated by 15 nucleotides MPMX20_04039: MPMX20_04039 - D-tagatose-1,6-bisphosphate aldolase subunit KbaZ, at 4,236,941 to 4,238,236 _04039 MPMX20_04040: MPMX20_04040 - PTS system fructose-specific EIIB component, at 4,238,256 to 4,238,729 _04040 MPMX20_04041: MPMX20_04041 - N-acetylgalactosamine permease IIC component 1, at 4,238,740 to 4,239,519 _04041 MPMX20_04042: MPMX20_04042 - PTS system mannose-specific EIID component, at 4,239,509 to 4,240,387 _04042 MPMX20_04043: MPMX20_04043 - hypothetical protein, at 4,240,403 to 4,240,837 _04043 Position (kb) 4238 4239 4240Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4237.786 kb on + strand, within MPMX20_04039at 4237.794 kb on - strand, within MPMX20_04039at 4237.802 kb on + strand, within MPMX20_04039at 4237.802 kb on + strand, within MPMX20_04039at 4237.809 kb on + strand, within MPMX20_04039at 4237.809 kb on + strand, within MPMX20_04039at 4237.809 kb on + strand, within MPMX20_04039at 4237.809 kb on + strand, within MPMX20_04039at 4237.809 kb on + strand, within MPMX20_04039at 4237.809 kb on + strand, within MPMX20_04039at 4237.810 kb on - strand, within MPMX20_04039at 4237.810 kb on - strand, within MPMX20_04039at 4237.817 kb on - strand, within MPMX20_04039at 4237.817 kb on - strand, within MPMX20_04039at 4237.817 kb on - strand, within MPMX20_04039at 4237.817 kb on - strand, within MPMX20_04039at 4237.817 kb on - strand, within MPMX20_04039at 4237.817 kb on - strand, within MPMX20_04039at 4237.819 kb on + strand, within MPMX20_04039at 4237.856 kb on + strand, within MPMX20_04039at 4237.878 kb on + strand, within MPMX20_04039at 4237.883 kb on + strand, within MPMX20_04039at 4237.886 kb on - strand, within MPMX20_04039at 4237.896 kb on - strand, within MPMX20_04039at 4237.896 kb on - strand, within MPMX20_04039at 4237.987 kb on - strand, within MPMX20_04039at 4237.988 kb on - strand, within MPMX20_04039at 4237.988 kb on - strand, within MPMX20_04039at 4237.988 kb on - strand, within MPMX20_04039at 4238.011 kb on - strand, within MPMX20_04039at 4238.084 kb on + strand, within MPMX20_04039at 4238.158 kb on + strandat 4238.192 kb on - strandat 4238.268 kb on + strandat 4238.268 kb on + strandat 4238.276 kb on - strandat 4238.334 kb on - strand, within MPMX20_04040at 4238.349 kb on - strand, within MPMX20_04040at 4238.349 kb on - strand, within MPMX20_04040at 4238.359 kb on - strand, within MPMX20_04040at 4238.539 kb on - strand, within MPMX20_04040at 4238.555 kb on - strand, within MPMX20_04040at 4238.703 kb on + strandat 4238.714 kb on + strandat 4238.721 kb on - strandat 4238.721 kb on - strandat 4238.750 kb on - strandat 4238.794 kb on + strandat 4238.794 kb on + strandat 4238.813 kb on + strandat 4238.821 kb on + strand, within MPMX20_04041at 4238.821 kb on - strand, within MPMX20_04041at 4238.831 kb on + strand, within MPMX20_04041at 4238.839 kb on - strand, within MPMX20_04041at 4238.839 kb on - strand, within MPMX20_04041at 4238.858 kb on + strand, within MPMX20_04041at 4238.863 kb on + strand, within MPMX20_04041at 4238.866 kb on - strand, within MPMX20_04041at 4238.918 kb on + strand, within MPMX20_04041at 4238.921 kb on - strand, within MPMX20_04041at 4238.921 kb on - strand, within MPMX20_04041at 4239.090 kb on + strand, within MPMX20_04041at 4239.474 kb on + strandat 4239.533 kb on - strandat 4239.552 kb on + strandat 4239.634 kb on + strand, within MPMX20_04042at 4239.727 kb on + strand, within MPMX20_04042at 4239.752 kb on + strand, within MPMX20_04042at 4239.760 kb on - strand, within MPMX20_04042at 4239.760 kb on - strand, within MPMX20_04042at 4239.760 kb on - strand, within MPMX20_04042at 4239.765 kb on - strand, within MPMX20_04042at 4239.774 kb on + strand, within MPMX20_04042at 4239.782 kb on + strand, within MPMX20_04042at 4239.857 kb on + strand, within MPMX20_04042at 4239.884 kb on - strand, within MPMX20_04042at 4239.925 kb on + strand, within MPMX20_04042at 4239.925 kb on + strand, within MPMX20_04042at 4239.930 kb on + strand, within MPMX20_04042at 4239.930 kb on + strand, within MPMX20_04042at 4239.933 kb on - strand, within MPMX20_04042at 4239.963 kb on + strand, within MPMX20_04042at 4239.963 kb on + strand, within MPMX20_04042at 4239.977 kb on - strand, within MPMX20_04042at 4239.977 kb on - strand, within MPMX20_04042at 4239.992 kb on - strand, within MPMX20_04042at 4240.016 kb on - strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.018 kb on + strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.026 kb on - strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.096 kb on + strand, within MPMX20_04042at 4240.104 kb on - strand, within MPMX20_04042at 4240.122 kb on + strand, within MPMX20_04042at 4240.130 kb on + strand, within MPMX20_04042at 4240.137 kb on + strand, within MPMX20_04042at 4240.181 kb on + strand, within MPMX20_04042at 4240.183 kb on + strand, within MPMX20_04042at 4240.189 kb on - strand, within MPMX20_04042at 4240.189 kb on - strand, within MPMX20_04042at 4240.201 kb on + strand, within MPMX20_04042at 4240.252 kb on + strand, within MPMX20_04042at 4240.276 kb on + strand, within MPMX20_04042at 4240.276 kb on + strand, within MPMX20_04042at 4240.277 kb on + strand, within MPMX20_04042at 4240.278 kb on + strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.284 kb on - strand, within MPMX20_04042at 4240.285 kb on - strand, within MPMX20_04042at 4240.286 kb on - strand, within MPMX20_04042at 4240.322 kb on - strandat 4240.344 kb on + strandat 4240.344 kb on + strandat 4240.369 kb on + strandat 4240.369 kb on + strandat 4240.397 kb on - strandat 4240.446 kb on + strandat 4240.454 kb on - strand, within MPMX20_04043at 4240.497 kb on - strand, within MPMX20_04043

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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4,237,786 + MPMX20_04039 0.65 +0.5
4,237,794 - MPMX20_04039 0.66 +0.5
4,237,802 + MPMX20_04039 0.66 -0.0
4,237,802 + MPMX20_04039 0.66 +0.1
4,237,809 + MPMX20_04039 0.67 +1.7
4,237,809 + MPMX20_04039 0.67 -0.4
4,237,809 + MPMX20_04039 0.67 -0.8
4,237,809 + MPMX20_04039 0.67 -0.7
4,237,809 + MPMX20_04039 0.67 +0.5
4,237,809 + MPMX20_04039 0.67 +0.3
4,237,810 - MPMX20_04039 0.67 -1.4
4,237,810 - MPMX20_04039 0.67 -0.4
4,237,817 - MPMX20_04039 0.68 -0.3
4,237,817 - MPMX20_04039 0.68 -0.4
4,237,817 - MPMX20_04039 0.68 -0.3
4,237,817 - MPMX20_04039 0.68 -0.4
4,237,817 - MPMX20_04039 0.68 -0.2
4,237,817 - MPMX20_04039 0.68 +0.2
4,237,819 + MPMX20_04039 0.68 +0.0
4,237,856 + MPMX20_04039 0.71 -0.3
4,237,878 + MPMX20_04039 0.72 -0.3
4,237,883 + MPMX20_04039 0.73 +2.0
4,237,886 - MPMX20_04039 0.73 +0.9
4,237,896 - MPMX20_04039 0.74 +0.6
4,237,896 - MPMX20_04039 0.74 -0.1
4,237,987 - MPMX20_04039 0.81 -0.3
4,237,988 - MPMX20_04039 0.81 -1.5
4,237,988 - MPMX20_04039 0.81 -0.0
4,237,988 - MPMX20_04039 0.81 -0.3
4,238,011 - MPMX20_04039 0.83 +0.7
4,238,084 + MPMX20_04039 0.88 -0.2
4,238,158 + +0.5
4,238,192 - +0.5
4,238,268 + +0.1
4,238,268 + +0.4
4,238,276 - -0.5
4,238,334 - MPMX20_04040 0.16 +0.2
4,238,349 - MPMX20_04040 0.20 +1.5
4,238,349 - MPMX20_04040 0.20 +2.3
4,238,359 - MPMX20_04040 0.22 -0.3
4,238,539 - MPMX20_04040 0.60 +0.4
4,238,555 - MPMX20_04040 0.63 -0.4
4,238,703 + +0.3
4,238,714 + +0.7
4,238,721 - -0.0
4,238,721 - +2.0
4,238,750 - -0.4
4,238,794 + -0.7
4,238,794 + +0.1
4,238,813 + +0.0
4,238,821 + MPMX20_04041 0.10 +0.1
4,238,821 - MPMX20_04041 0.10 -0.0
4,238,831 + MPMX20_04041 0.12 +0.8
4,238,839 - MPMX20_04041 0.13 -0.6
4,238,839 - MPMX20_04041 0.13 -0.3
4,238,858 + MPMX20_04041 0.15 +0.1
4,238,863 + MPMX20_04041 0.16 +0.6
4,238,866 - MPMX20_04041 0.16 -2.0
4,238,918 + MPMX20_04041 0.23 +3.5
4,238,921 - MPMX20_04041 0.23 +0.4
4,238,921 - MPMX20_04041 0.23 +0.7
4,239,090 + MPMX20_04041 0.45 +0.6
4,239,474 + -1.2
4,239,533 - +0.8
4,239,552 + +0.4
4,239,634 + MPMX20_04042 0.14 -0.8
4,239,727 + MPMX20_04042 0.25 +0.8
4,239,752 + MPMX20_04042 0.28 -1.5
4,239,760 - MPMX20_04042 0.29 +0.2
4,239,760 - MPMX20_04042 0.29 -1.1
4,239,760 - MPMX20_04042 0.29 +1.9
4,239,765 - MPMX20_04042 0.29 +1.1
4,239,774 + MPMX20_04042 0.30 +0.1
4,239,782 + MPMX20_04042 0.31 +0.6
4,239,857 + MPMX20_04042 0.40 -0.0
4,239,884 - MPMX20_04042 0.43 +0.4
4,239,925 + MPMX20_04042 0.47 +0.5
4,239,925 + MPMX20_04042 0.47 +0.5
4,239,930 + MPMX20_04042 0.48 -0.3
4,239,930 + MPMX20_04042 0.48 +0.6
4,239,933 - MPMX20_04042 0.48 +0.5
4,239,963 + MPMX20_04042 0.52 +0.9
4,239,963 + MPMX20_04042 0.52 -0.0
4,239,977 - MPMX20_04042 0.53 -0.5
4,239,977 - MPMX20_04042 0.53 +1.1
4,239,992 - MPMX20_04042 0.55 -0.4
4,240,016 - MPMX20_04042 0.58 +0.7
4,240,018 + MPMX20_04042 0.58 +0.8
4,240,018 + MPMX20_04042 0.58 +0.7
4,240,018 + MPMX20_04042 0.58 +0.8
4,240,018 + MPMX20_04042 0.58 +0.9
4,240,018 + MPMX20_04042 0.58 -0.4
4,240,018 + MPMX20_04042 0.58 +0.0
4,240,018 + MPMX20_04042 0.58 +0.4
4,240,018 + MPMX20_04042 0.58 +0.1
4,240,018 + MPMX20_04042 0.58 +0.5
4,240,018 + MPMX20_04042 0.58 -0.5
4,240,018 + MPMX20_04042 0.58 +0.4
4,240,018 + MPMX20_04042 0.58 +0.0
4,240,018 + MPMX20_04042 0.58 +0.6
4,240,026 - MPMX20_04042 0.59 -2.6
4,240,026 - MPMX20_04042 0.59 -0.1
4,240,026 - MPMX20_04042 0.59 +0.8
4,240,026 - MPMX20_04042 0.59 +1.0
4,240,026 - MPMX20_04042 0.59 -1.0
4,240,026 - MPMX20_04042 0.59 -0.3
4,240,026 - MPMX20_04042 0.59 +1.3
4,240,026 - MPMX20_04042 0.59 -0.5
4,240,026 - MPMX20_04042 0.59 -2.0
4,240,026 - MPMX20_04042 0.59 +1.1
4,240,026 - MPMX20_04042 0.59 -0.1
4,240,026 - MPMX20_04042 0.59 -0.8
4,240,096 + MPMX20_04042 0.67 -0.8
4,240,096 + MPMX20_04042 0.67 -0.0
4,240,096 + MPMX20_04042 0.67 +0.1
4,240,096 + MPMX20_04042 0.67 +0.3
4,240,104 - MPMX20_04042 0.68 -0.1
4,240,122 + MPMX20_04042 0.70 +0.0
4,240,130 + MPMX20_04042 0.71 +0.7
4,240,137 + MPMX20_04042 0.71 -0.5
4,240,181 + MPMX20_04042 0.76 -0.5
4,240,183 + MPMX20_04042 0.77 -0.3
4,240,189 - MPMX20_04042 0.77 -0.4
4,240,189 - MPMX20_04042 0.77 -0.3
4,240,201 + MPMX20_04042 0.79 -0.0
4,240,252 + MPMX20_04042 0.85 +2.2
4,240,276 + MPMX20_04042 0.87 -0.3
4,240,276 + MPMX20_04042 0.87 -0.3
4,240,277 + MPMX20_04042 0.87 -1.8
4,240,278 + MPMX20_04042 0.87 -0.3
4,240,284 - MPMX20_04042 0.88 +0.5
4,240,284 - MPMX20_04042 0.88 -0.2
4,240,284 - MPMX20_04042 0.88 +0.4
4,240,284 - MPMX20_04042 0.88 +0.1
4,240,284 - MPMX20_04042 0.88 +1.2
4,240,284 - MPMX20_04042 0.88 +1.0
4,240,284 - MPMX20_04042 0.88 +0.9
4,240,284 - MPMX20_04042 0.88 -0.5
4,240,285 - MPMX20_04042 0.88 +0.1
4,240,286 - MPMX20_04042 0.88 -1.2
4,240,322 - -0.4
4,240,344 + +0.3
4,240,344 + +0.1
4,240,369 + +0.5
4,240,369 + +0.2
4,240,397 - +1.1
4,240,446 + +0.8
4,240,454 - MPMX20_04043 0.12 +0.3
4,240,497 - MPMX20_04043 0.22 -0.6

Or see this region's nucleotide sequence