Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS08565

Experiment: Aerobic, pH5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic, pH5.5
1,824,484	+				-2.1
1,824,485	-				-0.1
1,824,620	-				-0.1
1,824,620	-				-0.1
1,824,749	-				-0.1
1,824,851	+		ABCV34_RS08565	0.10	-3.4
1,824,851	+		ABCV34_RS08565	0.10	-0.1
1,824,851	+		ABCV34_RS08565	0.10	-1.1
1,824,851	+		ABCV34_RS08565	0.10	-0.1
1,824,851	+		ABCV34_RS08565	0.10	-1.7
1,824,852	-		ABCV34_RS08565	0.10	-0.1
1,824,852	-		ABCV34_RS08565	0.10	-0.1
1,824,852	-		ABCV34_RS08565	0.10	-0.1
1,824,852	-		ABCV34_RS08565	0.10	-0.1
1,824,852	-		ABCV34_RS08565	0.10	-2.7
1,825,139	-		ABCV34_RS08565	0.18	-1.7
1,825,596	+		ABCV34_RS08565	0.31	-0.1
1,825,597	-		ABCV34_RS08565	0.31	-0.1
1,825,597	-		ABCV34_RS08565	0.31	-2.1
1,826,079	+		ABCV34_RS08565	0.45	-0.1
1,826,080	-		ABCV34_RS08565	0.45	-1.1
1,826,317	-		ABCV34_RS08565	0.51	-1.7
1,826,317	-		ABCV34_RS08565	0.51	-1.1
1,826,317	-		ABCV34_RS08565	0.51	-1.7
1,826,317	-		ABCV34_RS08565	0.51	-1.7
1,826,317	-		ABCV34_RS08565	0.51	-2.4
1,826,740	+		ABCV34_RS08565	0.63	-3.4
1,827,150	+		ABCV34_RS08565	0.75	-3.1
1,827,151	-		ABCV34_RS08565	0.75	-2.5
1,827,151	-		ABCV34_RS08565	0.75	-2.1
1,827,514	-		ABCV34_RS08565	0.85	-2.1
1,827,543	+		ABCV34_RS08565	0.86	-3.1
1,827,544	-		ABCV34_RS08565	0.86	-2.7
1,827,687	+				-0.1
1,827,687	+				-3.5
1,827,687	+				-2.4
1,827,688	-				-1.1
1,827,738	+				-1.4
1,827,738	+				-3.3
1,827,739	-				-3.6
1,828,071	+				-2.5
1,828,071	+				+0.5
1,828,071	+				-2.4
1,828,071	+				-1.7
1,828,071	+				-2.7
1,828,071	+				-0.1
1,828,071	+				-2.9
1,828,071	+				-1.1
1,828,071	+				-1.7
1,828,072	-				-3.7
1,828,072	-				-2.7
1,828,072	-				-3.3
1,828,072	-				-2.4
1,828,072	-				-2.8
1,828,072	-				-3.8
1,828,072	-				-3.0
1,828,072	-				-2.0
1,828,072	-				-2.6
1,828,072	-				-1.7
1,828,072	-				-2.5
1,828,072	-				-2.2
1,828,072	-				-3.9
1,828,072	-				-2.4
1,828,072	-				-2.6
1,828,077	-				-2.3
1,828,106	-				-2.9
1,828,148	+				-2.8
1,828,148	+				-1.7
1,828,148	+				-2.3
1,828,148	+				-0.1
1,828,149	-				-0.6
1,828,149	-				-1.3
1,828,149	-				-1.3
1,828,149	-				-0.5
1,828,164	+				-0.1
1,828,164	+				-1.6
1,828,164	+				-1.8
1,828,164	+				-1.6
1,828,165	-				-2.3
1,828,165	-				-1.9
1,828,165	-				-1.2
1,828,165	-				-0.7