Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04517

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04515 and MPMX20_04516 are separated by 41 nucleotidesMPMX20_04516 and MPMX20_04517 are separated by 9 nucleotidesMPMX20_04517 and MPMX20_04518 are separated by 196 nucleotides MPMX20_04515: MPMX20_04515 - tRNA/tmRNA (uracil-C(5))-methyltransferase, at 4,723,189 to 4,724,289 _04515 MPMX20_04516: MPMX20_04516 - Inner membrane protein YijD, at 4,724,331 to 4,724,690 _04516 MPMX20_04517: MPMX20_04517 - HTH-type transcriptional repressor FabR, at 4,724,700 to 4,725,338 _04517 MPMX20_04518: MPMX20_04518 - Soluble pyridine nucleotide transhydrogenase, at 4,725,535 to 4,726,935 _04518 Position (kb) 4724 4725 4726Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4723.738 kb on + strand, within MPMX20_04515at 4723.746 kb on - strand, within MPMX20_04515at 4723.756 kb on - strand, within MPMX20_04515at 4723.756 kb on - strand, within MPMX20_04515at 4723.756 kb on - strand, within MPMX20_04515at 4723.756 kb on - strand, within MPMX20_04515at 4723.756 kb on - strand, within MPMX20_04515at 4723.807 kb on + strand, within MPMX20_04515at 4723.807 kb on + strand, within MPMX20_04515at 4723.814 kb on + strand, within MPMX20_04515at 4723.815 kb on + strand, within MPMX20_04515at 4723.834 kb on + strand, within MPMX20_04515at 4723.925 kb on + strand, within MPMX20_04515at 4723.933 kb on - strand, within MPMX20_04515at 4723.935 kb on + strand, within MPMX20_04515at 4723.943 kb on - strand, within MPMX20_04515at 4723.943 kb on - strand, within MPMX20_04515at 4723.983 kb on - strand, within MPMX20_04515at 4723.985 kb on + strand, within MPMX20_04515at 4723.993 kb on - strand, within MPMX20_04515at 4723.995 kb on - strand, within MPMX20_04515at 4724.004 kb on + strand, within MPMX20_04515at 4724.015 kb on + strand, within MPMX20_04515at 4724.015 kb on + strand, within MPMX20_04515at 4724.023 kb on - strand, within MPMX20_04515at 4724.023 kb on - strand, within MPMX20_04515at 4724.033 kb on + strand, within MPMX20_04515at 4724.055 kb on - strand, within MPMX20_04515at 4724.064 kb on - strand, within MPMX20_04515at 4724.098 kb on + strand, within MPMX20_04515at 4724.098 kb on + strand, within MPMX20_04515at 4724.106 kb on - strand, within MPMX20_04515at 4724.106 kb on - strand, within MPMX20_04515at 4724.106 kb on - strand, within MPMX20_04515at 4724.106 kb on - strand, within MPMX20_04515at 4724.133 kb on - strand, within MPMX20_04515at 4724.200 kb on - strandat 4724.218 kb on - strandat 4724.220 kb on - strandat 4724.267 kb on + strandat 4724.267 kb on + strandat 4724.290 kb on + strandat 4724.303 kb on + strandat 4724.328 kb on + strandat 4724.369 kb on + strand, within MPMX20_04516at 4724.369 kb on + strand, within MPMX20_04516at 4724.422 kb on - strand, within MPMX20_04516at 4724.444 kb on - strand, within MPMX20_04516at 4724.452 kb on + strand, within MPMX20_04516at 4724.452 kb on + strand, within MPMX20_04516at 4724.452 kb on + strand, within MPMX20_04516at 4724.452 kb on + strand, within MPMX20_04516at 4724.452 kb on + strand, within MPMX20_04516at 4724.453 kb on - strand, within MPMX20_04516at 4724.455 kb on - strand, within MPMX20_04516at 4724.465 kb on - strand, within MPMX20_04516at 4724.482 kb on - strand, within MPMX20_04516at 4724.482 kb on - strand, within MPMX20_04516at 4724.494 kb on + strand, within MPMX20_04516at 4724.527 kb on + strand, within MPMX20_04516at 4724.527 kb on + strand, within MPMX20_04516at 4724.537 kb on + strand, within MPMX20_04516at 4724.537 kb on + strand, within MPMX20_04516at 4724.545 kb on - strand, within MPMX20_04516at 4724.547 kb on + strand, within MPMX20_04516at 4724.550 kb on - strand, within MPMX20_04516at 4724.553 kb on - strand, within MPMX20_04516at 4724.554 kb on + strand, within MPMX20_04516at 4724.562 kb on - strand, within MPMX20_04516at 4724.659 kb on + strandat 4724.660 kb on + strandat 4724.665 kb on + strandat 4724.665 kb on + strandat 4724.665 kb on + strandat 4724.665 kb on + strandat 4724.665 kb on + strandat 4724.665 kb on + strandat 4724.665 kb on + strandat 4724.667 kb on - strandat 4724.670 kb on + strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.673 kb on - strandat 4724.678 kb on - strandat 4724.690 kb on + strandat 4724.705 kb on - strandat 4724.751 kb on - strandat 4724.758 kb on + strandat 4724.758 kb on + strandat 4724.770 kb on + strand, within MPMX20_04517at 4724.778 kb on - strand, within MPMX20_04517at 4724.877 kb on - strand, within MPMX20_04517at 4724.877 kb on - strand, within MPMX20_04517at 4724.896 kb on + strand, within MPMX20_04517at 4725.067 kb on - strand, within MPMX20_04517at 4725.067 kb on - strand, within MPMX20_04517at 4725.136 kb on - strand, within MPMX20_04517at 4725.141 kb on + strand, within MPMX20_04517at 4725.149 kb on - strand, within MPMX20_04517at 4725.154 kb on + strand, within MPMX20_04517at 4725.156 kb on - strand, within MPMX20_04517at 4725.162 kb on - strand, within MPMX20_04517at 4725.234 kb on - strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.236 kb on + strand, within MPMX20_04517at 4725.244 kb on - strand, within MPMX20_04517at 4725.244 kb on - strand, within MPMX20_04517at 4725.244 kb on - strand, within MPMX20_04517at 4725.244 kb on - strand, within MPMX20_04517at 4725.244 kb on - strand, within MPMX20_04517at 4725.262 kb on + strand, within MPMX20_04517at 4725.262 kb on + strand, within MPMX20_04517at 4725.262 kb on + strand, within MPMX20_04517at 4725.270 kb on - strand, within MPMX20_04517at 4725.359 kb on + strandat 4725.367 kb on - strandat 4725.438 kb on - strandat 4725.527 kb on + strandat 4725.535 kb on - strandat 4725.592 kb on + strandat 4725.626 kb on + strandat 4725.647 kb on + strandat 4725.665 kb on + strandat 4725.759 kb on + strand, within MPMX20_04518at 4725.842 kb on + strand, within MPMX20_04518at 4725.850 kb on - strand, within MPMX20_04518at 4725.852 kb on + strand, within MPMX20_04518at 4725.876 kb on + strand, within MPMX20_04518at 4725.895 kb on + strand, within MPMX20_04518at 4725.982 kb on - strand, within MPMX20_04518at 4726.007 kb on + strand, within MPMX20_04518at 4726.015 kb on - strand, within MPMX20_04518at 4726.015 kb on - strand, within MPMX20_04518at 4726.154 kb on - strand, within MPMX20_04518at 4726.198 kb on - strand, within MPMX20_04518at 4726.198 kb on - strand, within MPMX20_04518

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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4,723,738 + MPMX20_04515 0.50 -2.6
4,723,746 - MPMX20_04515 0.51 +2.1
4,723,756 - MPMX20_04515 0.51 -0.1
4,723,756 - MPMX20_04515 0.51 -0.4
4,723,756 - MPMX20_04515 0.51 +0.8
4,723,756 - MPMX20_04515 0.51 -0.1
4,723,756 - MPMX20_04515 0.51 -0.3
4,723,807 + MPMX20_04515 0.56 +1.0
4,723,807 + MPMX20_04515 0.56 -0.7
4,723,814 + MPMX20_04515 0.57 -0.3
4,723,815 + MPMX20_04515 0.57 +0.9
4,723,834 + MPMX20_04515 0.59 -0.6
4,723,925 + MPMX20_04515 0.67 -0.7
4,723,933 - MPMX20_04515 0.68 -1.5
4,723,935 + MPMX20_04515 0.68 +0.2
4,723,943 - MPMX20_04515 0.68 +0.2
4,723,943 - MPMX20_04515 0.68 +0.3
4,723,983 - MPMX20_04515 0.72 -0.5
4,723,985 + MPMX20_04515 0.72 -0.2
4,723,993 - MPMX20_04515 0.73 -0.4
4,723,995 - MPMX20_04515 0.73 +0.6
4,724,004 + MPMX20_04515 0.74 -0.3
4,724,015 + MPMX20_04515 0.75 -1.6
4,724,015 + MPMX20_04515 0.75 +0.3
4,724,023 - MPMX20_04515 0.76 -0.5
4,724,023 - MPMX20_04515 0.76 +0.2
4,724,033 + MPMX20_04515 0.77 -0.1
4,724,055 - MPMX20_04515 0.79 -0.3
4,724,064 - MPMX20_04515 0.79 -2.2
4,724,098 + MPMX20_04515 0.83 -1.8
4,724,098 + MPMX20_04515 0.83 -0.3
4,724,106 - MPMX20_04515 0.83 +1.2
4,724,106 - MPMX20_04515 0.83 -0.6
4,724,106 - MPMX20_04515 0.83 -0.1
4,724,106 - MPMX20_04515 0.83 -0.6
4,724,133 - MPMX20_04515 0.86 +0.7
4,724,200 - +0.3
4,724,218 - +0.2
4,724,220 - -0.3
4,724,267 + +0.3
4,724,267 + -0.1
4,724,290 + -1.8
4,724,303 + +0.1
4,724,328 + +0.4
4,724,369 + MPMX20_04516 0.11 -0.5
4,724,369 + MPMX20_04516 0.11 -0.3
4,724,422 - MPMX20_04516 0.25 +1.3
4,724,444 - MPMX20_04516 0.31 -0.3
4,724,452 + MPMX20_04516 0.34 +1.0
4,724,452 + MPMX20_04516 0.34 -0.0
4,724,452 + MPMX20_04516 0.34 -0.4
4,724,452 + MPMX20_04516 0.34 +0.0
4,724,452 + MPMX20_04516 0.34 +0.9
4,724,453 - MPMX20_04516 0.34 +0.7
4,724,455 - MPMX20_04516 0.34 +0.1
4,724,465 - MPMX20_04516 0.37 -0.6
4,724,482 - MPMX20_04516 0.42 -0.9
4,724,482 - MPMX20_04516 0.42 +0.7
4,724,494 + MPMX20_04516 0.45 -0.3
4,724,527 + MPMX20_04516 0.54 -0.7
4,724,527 + MPMX20_04516 0.54 -1.0
4,724,537 + MPMX20_04516 0.57 +1.0
4,724,537 + MPMX20_04516 0.57 +0.5
4,724,545 - MPMX20_04516 0.59 +0.2
4,724,547 + MPMX20_04516 0.60 -0.6
4,724,550 - MPMX20_04516 0.61 -0.3
4,724,553 - MPMX20_04516 0.62 +0.4
4,724,554 + MPMX20_04516 0.62 -2.6
4,724,562 - MPMX20_04516 0.64 -0.3
4,724,659 + -0.9
4,724,660 + -1.1
4,724,665 + -0.5
4,724,665 + -0.5
4,724,665 + +0.7
4,724,665 + -0.4
4,724,665 + +0.4
4,724,665 + +0.3
4,724,665 + +0.2
4,724,667 - +0.3
4,724,670 + -1.0
4,724,673 - +0.4
4,724,673 - -0.9
4,724,673 - -1.9
4,724,673 - +0.2
4,724,673 - -0.4
4,724,673 - +0.1
4,724,673 - -0.1
4,724,673 - -0.5
4,724,673 - +0.2
4,724,678 - +1.0
4,724,690 + -0.0
4,724,705 - -0.7
4,724,751 - -0.1
4,724,758 + +0.8
4,724,758 + -0.8
4,724,770 + MPMX20_04517 0.11 -0.4
4,724,778 - MPMX20_04517 0.12 -1.5
4,724,877 - MPMX20_04517 0.28 +1.0
4,724,877 - MPMX20_04517 0.28 +0.2
4,724,896 + MPMX20_04517 0.31 -0.2
4,725,067 - MPMX20_04517 0.57 -2.2
4,725,067 - MPMX20_04517 0.57 -1.4
4,725,136 - MPMX20_04517 0.68 +0.7
4,725,141 + MPMX20_04517 0.69 +0.8
4,725,149 - MPMX20_04517 0.70 +0.2
4,725,154 + MPMX20_04517 0.71 -1.3
4,725,156 - MPMX20_04517 0.71 -0.8
4,725,162 - MPMX20_04517 0.72 -2.1
4,725,234 - MPMX20_04517 0.84 -1.3
4,725,236 + MPMX20_04517 0.84 -1.3
4,725,236 + MPMX20_04517 0.84 -1.0
4,725,236 + MPMX20_04517 0.84 -2.7
4,725,236 + MPMX20_04517 0.84 -1.9
4,725,236 + MPMX20_04517 0.84 -2.6
4,725,236 + MPMX20_04517 0.84 -0.3
4,725,236 + MPMX20_04517 0.84 -0.5
4,725,236 + MPMX20_04517 0.84 +0.8
4,725,244 - MPMX20_04517 0.85 -0.9
4,725,244 - MPMX20_04517 0.85 -2.3
4,725,244 - MPMX20_04517 0.85 -1.6
4,725,244 - MPMX20_04517 0.85 -1.6
4,725,244 - MPMX20_04517 0.85 -1.1
4,725,262 + MPMX20_04517 0.88 -0.2
4,725,262 + MPMX20_04517 0.88 +0.1
4,725,262 + MPMX20_04517 0.88 +0.4
4,725,270 - MPMX20_04517 0.89 -1.9
4,725,359 + +0.4
4,725,367 - -1.0
4,725,438 - +0.2
4,725,527 + -0.5
4,725,535 - -0.4
4,725,592 + -0.5
4,725,626 + -2.6
4,725,647 + +0.2
4,725,665 + -0.3
4,725,759 + MPMX20_04518 0.16 -2.9
4,725,842 + MPMX20_04518 0.22 -2.3
4,725,850 - MPMX20_04518 0.22 -0.8
4,725,852 + MPMX20_04518 0.23 -1.0
4,725,876 + MPMX20_04518 0.24 +1.8
4,725,895 + MPMX20_04518 0.26 -0.6
4,725,982 - MPMX20_04518 0.32 -2.2
4,726,007 + MPMX20_04518 0.34 -2.7
4,726,015 - MPMX20_04518 0.34 -0.4
4,726,015 - MPMX20_04518 0.34 +1.8
4,726,154 - MPMX20_04518 0.44 -2.1
4,726,198 - MPMX20_04518 0.47 -1.5
4,726,198 - MPMX20_04518 0.47 -0.7

Or see this region's nucleotide sequence