Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04251 and MPMX20_04252 overlap by 4 nucleotides MPMX20_04252 and MPMX20_04253 overlap by 8 nucleotides MPMX20_04253 and MPMX20_04254 are separated by 9 nucleotides MPMX20_04254 and MPMX20_04255 overlap by 1 nucleotides
MPMX20_04251: MPMX20_04251 - hypothetical protein, at 4,434,407 to 4,435,210
_04251
MPMX20_04252: MPMX20_04252 - Malonyl-S-ACP:biotin-protein carboxyltransferase MADC, at 4,435,207 to 4,436,040
_04252
MPMX20_04253: MPMX20_04253 - Malonate decarboxylase acyl carrier protein, at 4,436,033 to 4,436,332
_04253
MPMX20_04254: MPMX20_04254 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 4,436,342 to 4,437,199
_04254
MPMX20_04255: MPMX20_04255 - Acetyl-S-ACP:malonate ACP transferase, at 4,437,199 to 4,438,854
_04255
Position (kb)
4436
4437 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4435.129 kb on + strand, within MPMX20_04251 at 4435.137 kb on - strand at 4435.137 kb on - strand at 4435.137 kb on - strand at 4435.189 kb on + strand at 4435.232 kb on + strand at 4435.240 kb on - strand at 4435.240 kb on - strand at 4435.240 kb on - strand at 4435.247 kb on + strand at 4435.257 kb on + strand at 4435.257 kb on + strand at 4435.257 kb on + strand at 4435.257 kb on + strand at 4435.379 kb on + strand, within MPMX20_04252 at 4435.462 kb on + strand, within MPMX20_04252 at 4435.482 kb on - strand, within MPMX20_04252 at 4435.497 kb on + strand, within MPMX20_04252 at 4435.505 kb on - strand, within MPMX20_04252 at 4435.505 kb on - strand, within MPMX20_04252 at 4435.505 kb on - strand, within MPMX20_04252 at 4435.505 kb on - strand, within MPMX20_04252 at 4435.505 kb on - strand, within MPMX20_04252 at 4435.505 kb on - strand, within MPMX20_04252 at 4435.505 kb on - strand, within MPMX20_04252 at 4435.554 kb on + strand, within MPMX20_04252 at 4435.625 kb on - strand, within MPMX20_04252 at 4435.627 kb on + strand, within MPMX20_04252 at 4435.640 kb on - strand, within MPMX20_04252 at 4435.822 kb on - strand, within MPMX20_04252 at 4435.844 kb on + strand, within MPMX20_04252 at 4435.902 kb on + strand, within MPMX20_04252 at 4435.904 kb on + strand, within MPMX20_04252 at 4435.907 kb on - strand, within MPMX20_04252 at 4436.040 kb on + strand at 4436.042 kb on + strand at 4436.042 kb on + strand at 4436.043 kb on - strand at 4436.049 kb on - strand at 4436.050 kb on - strand at 4436.144 kb on + strand, within MPMX20_04253 at 4436.268 kb on + strand, within MPMX20_04253 at 4436.347 kb on + strand at 4436.352 kb on + strand at 4436.428 kb on - strand, within MPMX20_04254 at 4436.428 kb on - strand, within MPMX20_04254 at 4436.453 kb on + strand, within MPMX20_04254 at 4436.462 kb on + strand, within MPMX20_04254 at 4436.501 kb on - strand, within MPMX20_04254 at 4436.526 kb on + strand, within MPMX20_04254 at 4436.639 kb on + strand, within MPMX20_04254 at 4436.639 kb on + strand, within MPMX20_04254 at 4436.656 kb on + strand, within MPMX20_04254 at 4436.664 kb on - strand, within MPMX20_04254 at 4436.742 kb on + strand, within MPMX20_04254 at 4436.748 kb on - strand, within MPMX20_04254 at 4436.847 kb on + strand, within MPMX20_04254 at 4436.942 kb on - strand, within MPMX20_04254 at 4436.944 kb on + strand, within MPMX20_04254 at 4437.012 kb on - strand, within MPMX20_04254 at 4437.012 kb on - strand, within MPMX20_04254 at 4437.028 kb on + strand, within MPMX20_04254 at 4437.126 kb on + strand at 4437.134 kb on - strand at 4437.168 kb on + strand at 4437.224 kb on + strand at 4437.226 kb on + strand at 4437.244 kb on - strand at 4437.255 kb on + strand at 4437.255 kb on + strand at 4437.255 kb on + strand at 4437.263 kb on - strand at 4437.287 kb on - strand at 4437.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 4,435,129 + MPMX20_04251 0.90 +0.3 4,435,137 - +0.2 4,435,137 - +0.6 4,435,137 - -0.3 4,435,189 + -0.7 4,435,232 + +0.8 4,435,240 - +0.3 4,435,240 - -1.1 4,435,240 - +1.8 4,435,247 + -2.0 4,435,257 + +0.3 4,435,257 + -0.7 4,435,257 + +1.4 4,435,257 + +0.4 4,435,379 + MPMX20_04252 0.21 -1.4 4,435,462 + MPMX20_04252 0.31 +0.5 4,435,482 - MPMX20_04252 0.33 +0.0 4,435,497 + MPMX20_04252 0.35 -0.7 4,435,505 - MPMX20_04252 0.36 -0.1 4,435,505 - MPMX20_04252 0.36 -0.3 4,435,505 - MPMX20_04252 0.36 -0.5 4,435,505 - MPMX20_04252 0.36 +0.2 4,435,505 - MPMX20_04252 0.36 +0.4 4,435,505 - MPMX20_04252 0.36 -0.1 4,435,505 - MPMX20_04252 0.36 +0.5 4,435,554 + MPMX20_04252 0.42 -1.5 4,435,625 - MPMX20_04252 0.50 +0.2 4,435,627 + MPMX20_04252 0.50 +0.2 4,435,640 - MPMX20_04252 0.52 +1.1 4,435,822 - MPMX20_04252 0.74 +0.5 4,435,844 + MPMX20_04252 0.76 +0.2 4,435,902 + MPMX20_04252 0.83 +0.3 4,435,904 + MPMX20_04252 0.84 +0.7 4,435,907 - MPMX20_04252 0.84 +1.6 4,436,040 + -1.6 4,436,042 + +0.2 4,436,042 + +0.7 4,436,043 - -0.9 4,436,049 - -0.7 4,436,050 - -0.1 4,436,144 + MPMX20_04253 0.37 -1.5 4,436,268 + MPMX20_04253 0.78 -1.2 4,436,347 + -1.9 4,436,352 + +0.1 4,436,428 - MPMX20_04254 0.10 -1.0 4,436,428 - MPMX20_04254 0.10 +0.8 4,436,453 + MPMX20_04254 0.13 -0.8 4,436,462 + MPMX20_04254 0.14 -1.5 4,436,501 - MPMX20_04254 0.19 -1.2 4,436,526 + MPMX20_04254 0.21 +0.9 4,436,639 + MPMX20_04254 0.35 -0.4 4,436,639 + MPMX20_04254 0.35 +1.0 4,436,656 + MPMX20_04254 0.37 -3.1 4,436,664 - MPMX20_04254 0.38 -2.6 4,436,742 + MPMX20_04254 0.47 -0.1 4,436,748 - MPMX20_04254 0.47 +1.1 4,436,847 + MPMX20_04254 0.59 -1.0 4,436,942 - MPMX20_04254 0.70 -1.2 4,436,944 + MPMX20_04254 0.70 +1.1 4,437,012 - MPMX20_04254 0.78 -0.9 4,437,012 - MPMX20_04254 0.78 -0.1 4,437,028 + MPMX20_04254 0.80 -0.9 4,437,126 + +0.6 4,437,134 - +0.3 4,437,168 + -0.4 4,437,224 + +0.6 4,437,226 + +0.3 4,437,244 - -1.8 4,437,255 + +0.3 4,437,255 + -0.7 4,437,255 + +0.1 4,437,263 - +0.7 4,437,287 - -0.7 4,437,317 - -1.0
Or see this region's nucleotide sequence