Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03734 and MPMX20_03735 are separated by 11 nucleotides MPMX20_03735 and MPMX20_03736 are separated by 67 nucleotides MPMX20_03736 and MPMX20_03737 are separated by 42 nucleotides
MPMX20_03734: MPMX20_03734 - hypothetical protein, at 3,937,171 to 3,939,366
_03734
MPMX20_03735: MPMX20_03735 - Sucrose porin, at 3,939,378 to 3,940,715
_03735
MPMX20_03736: MPMX20_03736 - hypothetical protein, at 3,940,783 to 3,940,881
_03736
MPMX20_03737: MPMX20_03737 - Lichenan permease IIC component, at 3,940,924 to 3,942,195
_03737
Position (kb)
3939
3940
3941 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3938.380 kb on - strand, within MPMX20_03734 at 3938.408 kb on - strand, within MPMX20_03734 at 3938.433 kb on + strand, within MPMX20_03734 at 3938.476 kb on - strand, within MPMX20_03734 at 3938.530 kb on - strand, within MPMX20_03734 at 3938.639 kb on + strand, within MPMX20_03734 at 3938.717 kb on + strand, within MPMX20_03734 at 3938.725 kb on - strand, within MPMX20_03734 at 3938.738 kb on - strand, within MPMX20_03734 at 3938.738 kb on - strand, within MPMX20_03734 at 3938.738 kb on - strand, within MPMX20_03734 at 3938.738 kb on - strand, within MPMX20_03734 at 3938.773 kb on + strand, within MPMX20_03734 at 3938.783 kb on + strand, within MPMX20_03734 at 3938.909 kb on - strand, within MPMX20_03734 at 3938.932 kb on + strand, within MPMX20_03734 at 3938.932 kb on + strand, within MPMX20_03734 at 3938.932 kb on + strand, within MPMX20_03734 at 3938.940 kb on - strand, within MPMX20_03734 at 3938.940 kb on - strand, within MPMX20_03734 at 3939.018 kb on - strand, within MPMX20_03734 at 3939.045 kb on + strand, within MPMX20_03734 at 3939.070 kb on - strand, within MPMX20_03734 at 3939.081 kb on - strand, within MPMX20_03734 at 3939.081 kb on - strand, within MPMX20_03734 at 3939.081 kb on - strand, within MPMX20_03734 at 3939.130 kb on + strand, within MPMX20_03734 at 3939.130 kb on + strand, within MPMX20_03734 at 3939.140 kb on + strand, within MPMX20_03734 at 3939.143 kb on - strand, within MPMX20_03734 at 3939.143 kb on - strand, within MPMX20_03734 at 3939.188 kb on - strand at 3939.195 kb on + strand at 3939.198 kb on - strand at 3939.203 kb on - strand at 3939.396 kb on - strand at 3939.401 kb on + strand at 3939.510 kb on - strand at 3939.539 kb on + strand, within MPMX20_03735 at 3939.547 kb on - strand, within MPMX20_03735 at 3939.578 kb on - strand, within MPMX20_03735 at 3939.581 kb on + strand, within MPMX20_03735 at 3939.589 kb on - strand, within MPMX20_03735 at 3939.589 kb on - strand, within MPMX20_03735 at 3939.594 kb on - strand, within MPMX20_03735 at 3939.605 kb on - strand, within MPMX20_03735 at 3939.614 kb on - strand, within MPMX20_03735 at 3939.664 kb on + strand, within MPMX20_03735 at 3939.734 kb on - strand, within MPMX20_03735 at 3939.742 kb on - strand, within MPMX20_03735 at 3939.806 kb on + strand, within MPMX20_03735 at 3939.806 kb on - strand, within MPMX20_03735 at 3939.814 kb on - strand, within MPMX20_03735 at 3939.814 kb on - strand, within MPMX20_03735 at 3939.814 kb on - strand, within MPMX20_03735 at 3939.814 kb on - strand, within MPMX20_03735 at 3939.814 kb on - strand, within MPMX20_03735 at 3939.834 kb on + strand, within MPMX20_03735 at 3939.842 kb on - strand, within MPMX20_03735 at 3939.842 kb on - strand, within MPMX20_03735 at 3939.862 kb on + strand, within MPMX20_03735 at 3939.870 kb on - strand, within MPMX20_03735 at 3939.871 kb on - strand, within MPMX20_03735 at 3939.917 kb on + strand, within MPMX20_03735 at 3939.920 kb on - strand, within MPMX20_03735 at 3939.987 kb on - strand, within MPMX20_03735 at 3939.987 kb on - strand, within MPMX20_03735 at 3940.061 kb on + strand, within MPMX20_03735 at 3940.128 kb on + strand, within MPMX20_03735 at 3940.128 kb on + strand, within MPMX20_03735 at 3940.128 kb on + strand, within MPMX20_03735 at 3940.136 kb on - strand, within MPMX20_03735 at 3940.136 kb on - strand, within MPMX20_03735 at 3940.156 kb on + strand, within MPMX20_03735 at 3940.156 kb on + strand, within MPMX20_03735 at 3940.164 kb on - strand, within MPMX20_03735 at 3940.164 kb on - strand, within MPMX20_03735 at 3940.189 kb on - strand, within MPMX20_03735 at 3940.212 kb on + strand, within MPMX20_03735 at 3940.220 kb on - strand, within MPMX20_03735 at 3940.262 kb on + strand, within MPMX20_03735 at 3940.289 kb on + strand, within MPMX20_03735 at 3940.289 kb on + strand, within MPMX20_03735 at 3940.289 kb on + strand, within MPMX20_03735 at 3940.297 kb on - strand, within MPMX20_03735 at 3940.299 kb on + strand, within MPMX20_03735 at 3940.307 kb on - strand, within MPMX20_03735 at 3940.307 kb on - strand, within MPMX20_03735 at 3940.307 kb on - strand, within MPMX20_03735 at 3940.307 kb on - strand, within MPMX20_03735 at 3940.323 kb on - strand, within MPMX20_03735 at 3940.324 kb on + strand, within MPMX20_03735 at 3940.359 kb on + strand, within MPMX20_03735 at 3940.400 kb on - strand, within MPMX20_03735 at 3940.451 kb on + strand, within MPMX20_03735 at 3940.492 kb on + strand, within MPMX20_03735 at 3940.502 kb on + strand, within MPMX20_03735 at 3940.522 kb on + strand, within MPMX20_03735 at 3940.651 kb on + strand at 3940.658 kb on - strand at 3940.683 kb on + strand at 3940.902 kb on + strand at 3940.981 kb on + strand at 3940.991 kb on - strand at 3941.058 kb on + strand, within MPMX20_03737 at 3941.067 kb on + strand, within MPMX20_03737 at 3941.072 kb on + strand, within MPMX20_03737 at 3941.072 kb on + strand, within MPMX20_03737 at 3941.075 kb on - strand, within MPMX20_03737 at 3941.080 kb on - strand, within MPMX20_03737 at 3941.080 kb on - strand, within MPMX20_03737 at 3941.080 kb on - strand, within MPMX20_03737 at 3941.080 kb on - strand, within MPMX20_03737 at 3941.080 kb on - strand, within MPMX20_03737 at 3941.123 kb on - strand, within MPMX20_03737 at 3941.261 kb on + strand, within MPMX20_03737 at 3941.271 kb on + strand, within MPMX20_03737 at 3941.279 kb on - strand, within MPMX20_03737 at 3941.482 kb on - strand, within MPMX20_03737 at 3941.517 kb on - strand, within MPMX20_03737 at 3941.689 kb on - strand, within MPMX20_03737
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 3,938,380 - MPMX20_03734 0.55 -0.3 3,938,408 - MPMX20_03734 0.56 +0.2 3,938,433 + MPMX20_03734 0.57 -2.8 3,938,476 - MPMX20_03734 0.59 -0.0 3,938,530 - MPMX20_03734 0.62 +0.3 3,938,639 + MPMX20_03734 0.67 -1.2 3,938,717 + MPMX20_03734 0.70 +0.2 3,938,725 - MPMX20_03734 0.71 -0.6 3,938,738 - MPMX20_03734 0.71 +0.0 3,938,738 - MPMX20_03734 0.71 +0.2 3,938,738 - MPMX20_03734 0.71 +0.0 3,938,738 - MPMX20_03734 0.71 +1.1 3,938,773 + MPMX20_03734 0.73 -0.3 3,938,783 + MPMX20_03734 0.73 +0.8 3,938,909 - MPMX20_03734 0.79 -0.1 3,938,932 + MPMX20_03734 0.80 +1.1 3,938,932 + MPMX20_03734 0.80 +0.2 3,938,932 + MPMX20_03734 0.80 +0.6 3,938,940 - MPMX20_03734 0.81 -0.5 3,938,940 - MPMX20_03734 0.81 +0.4 3,939,018 - MPMX20_03734 0.84 -1.5 3,939,045 + MPMX20_03734 0.85 -0.6 3,939,070 - MPMX20_03734 0.86 -0.4 3,939,081 - MPMX20_03734 0.87 +0.7 3,939,081 - MPMX20_03734 0.87 +2.0 3,939,081 - MPMX20_03734 0.87 +1.2 3,939,130 + MPMX20_03734 0.89 -1.2 3,939,130 + MPMX20_03734 0.89 -2.3 3,939,140 + MPMX20_03734 0.90 +0.1 3,939,143 - MPMX20_03734 0.90 +0.5 3,939,143 - MPMX20_03734 0.90 +1.2 3,939,188 - +1.0 3,939,195 + +1.0 3,939,198 - -0.6 3,939,203 - -1.1 3,939,396 - -0.8 3,939,401 + -0.2 3,939,510 - -0.3 3,939,539 + MPMX20_03735 0.12 +2.8 3,939,547 - MPMX20_03735 0.13 -0.8 3,939,578 - MPMX20_03735 0.15 -0.0 3,939,581 + MPMX20_03735 0.15 +0.3 3,939,589 - MPMX20_03735 0.16 -1.2 3,939,589 - MPMX20_03735 0.16 -0.2 3,939,594 - MPMX20_03735 0.16 -0.1 3,939,605 - MPMX20_03735 0.17 +2.2 3,939,614 - MPMX20_03735 0.18 +3.0 3,939,664 + MPMX20_03735 0.21 -0.4 3,939,734 - MPMX20_03735 0.27 -0.3 3,939,742 - MPMX20_03735 0.27 +2.1 3,939,806 + MPMX20_03735 0.32 +0.0 3,939,806 - MPMX20_03735 0.32 -0.4 3,939,814 - MPMX20_03735 0.33 -0.3 3,939,814 - MPMX20_03735 0.33 +0.2 3,939,814 - MPMX20_03735 0.33 +0.4 3,939,814 - MPMX20_03735 0.33 +0.2 3,939,814 - MPMX20_03735 0.33 -1.1 3,939,834 + MPMX20_03735 0.34 -0.9 3,939,842 - MPMX20_03735 0.35 -1.1 3,939,842 - MPMX20_03735 0.35 -0.7 3,939,862 + MPMX20_03735 0.36 -0.6 3,939,870 - MPMX20_03735 0.37 +0.8 3,939,871 - MPMX20_03735 0.37 -0.3 3,939,917 + MPMX20_03735 0.40 -0.2 3,939,920 - MPMX20_03735 0.41 -0.8 3,939,987 - MPMX20_03735 0.46 -0.8 3,939,987 - MPMX20_03735 0.46 -1.1 3,940,061 + MPMX20_03735 0.51 -0.2 3,940,128 + MPMX20_03735 0.56 +0.4 3,940,128 + MPMX20_03735 0.56 -0.2 3,940,128 + MPMX20_03735 0.56 -0.6 3,940,136 - MPMX20_03735 0.57 -0.4 3,940,136 - MPMX20_03735 0.57 -1.4 3,940,156 + MPMX20_03735 0.58 +0.3 3,940,156 + MPMX20_03735 0.58 -0.3 3,940,164 - MPMX20_03735 0.59 +0.4 3,940,164 - MPMX20_03735 0.59 -0.3 3,940,189 - MPMX20_03735 0.61 -1.6 3,940,212 + MPMX20_03735 0.62 -0.4 3,940,220 - MPMX20_03735 0.63 -1.1 3,940,262 + MPMX20_03735 0.66 -0.4 3,940,289 + MPMX20_03735 0.68 -0.4 3,940,289 + MPMX20_03735 0.68 +0.1 3,940,289 + MPMX20_03735 0.68 -0.4 3,940,297 - MPMX20_03735 0.69 +0.9 3,940,299 + MPMX20_03735 0.69 -1.0 3,940,307 - MPMX20_03735 0.69 +0.7 3,940,307 - MPMX20_03735 0.69 +0.3 3,940,307 - MPMX20_03735 0.69 -0.2 3,940,307 - MPMX20_03735 0.69 -0.3 3,940,323 - MPMX20_03735 0.71 -0.4 3,940,324 + MPMX20_03735 0.71 +0.2 3,940,359 + MPMX20_03735 0.73 -0.6 3,940,400 - MPMX20_03735 0.76 -1.2 3,940,451 + MPMX20_03735 0.80 -0.5 3,940,492 + MPMX20_03735 0.83 +0.1 3,940,502 + MPMX20_03735 0.84 -0.7 3,940,522 + MPMX20_03735 0.86 -1.0 3,940,651 + +0.6 3,940,658 - +0.7 3,940,683 + +0.2 3,940,902 + -0.2 3,940,981 + -0.4 3,940,991 - -0.4 3,941,058 + MPMX20_03737 0.11 -1.0 3,941,067 + MPMX20_03737 0.11 -0.3 3,941,072 + MPMX20_03737 0.12 +0.4 3,941,072 + MPMX20_03737 0.12 -0.6 3,941,075 - MPMX20_03737 0.12 -0.6 3,941,080 - MPMX20_03737 0.12 -0.5 3,941,080 - MPMX20_03737 0.12 -0.4 3,941,080 - MPMX20_03737 0.12 -0.2 3,941,080 - MPMX20_03737 0.12 -0.9 3,941,080 - MPMX20_03737 0.12 -0.6 3,941,123 - MPMX20_03737 0.16 +0.8 3,941,261 + MPMX20_03737 0.26 -1.4 3,941,271 + MPMX20_03737 0.27 -0.3 3,941,279 - MPMX20_03737 0.28 -1.8 3,941,482 - MPMX20_03737 0.44 -0.5 3,941,517 - MPMX20_03737 0.47 -0.6 3,941,689 - MPMX20_03737 0.60 -1.0
Or see this region's nucleotide sequence