Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03735

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03734 and MPMX20_03735 are separated by 11 nucleotidesMPMX20_03735 and MPMX20_03736 are separated by 67 nucleotidesMPMX20_03736 and MPMX20_03737 are separated by 42 nucleotides MPMX20_03734: MPMX20_03734 - hypothetical protein, at 3,937,171 to 3,939,366 _03734 MPMX20_03735: MPMX20_03735 - Sucrose porin, at 3,939,378 to 3,940,715 _03735 MPMX20_03736: MPMX20_03736 - hypothetical protein, at 3,940,783 to 3,940,881 _03736 MPMX20_03737: MPMX20_03737 - Lichenan permease IIC component, at 3,940,924 to 3,942,195 _03737 Position (kb) 3939 3940 3941Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3938.380 kb on - strand, within MPMX20_03734at 3938.408 kb on - strand, within MPMX20_03734at 3938.433 kb on + strand, within MPMX20_03734at 3938.476 kb on - strand, within MPMX20_03734at 3938.530 kb on - strand, within MPMX20_03734at 3938.639 kb on + strand, within MPMX20_03734at 3938.717 kb on + strand, within MPMX20_03734at 3938.725 kb on - strand, within MPMX20_03734at 3938.738 kb on - strand, within MPMX20_03734at 3938.738 kb on - strand, within MPMX20_03734at 3938.738 kb on - strand, within MPMX20_03734at 3938.738 kb on - strand, within MPMX20_03734at 3938.773 kb on + strand, within MPMX20_03734at 3938.783 kb on + strand, within MPMX20_03734at 3938.909 kb on - strand, within MPMX20_03734at 3938.932 kb on + strand, within MPMX20_03734at 3938.932 kb on + strand, within MPMX20_03734at 3938.932 kb on + strand, within MPMX20_03734at 3938.940 kb on - strand, within MPMX20_03734at 3938.940 kb on - strand, within MPMX20_03734at 3939.018 kb on - strand, within MPMX20_03734at 3939.045 kb on + strand, within MPMX20_03734at 3939.070 kb on - strand, within MPMX20_03734at 3939.081 kb on - strand, within MPMX20_03734at 3939.081 kb on - strand, within MPMX20_03734at 3939.081 kb on - strand, within MPMX20_03734at 3939.130 kb on + strand, within MPMX20_03734at 3939.130 kb on + strand, within MPMX20_03734at 3939.140 kb on + strand, within MPMX20_03734at 3939.143 kb on - strand, within MPMX20_03734at 3939.143 kb on - strand, within MPMX20_03734at 3939.188 kb on - strandat 3939.195 kb on + strandat 3939.198 kb on - strandat 3939.203 kb on - strandat 3939.396 kb on - strandat 3939.401 kb on + strandat 3939.510 kb on - strandat 3939.539 kb on + strand, within MPMX20_03735at 3939.547 kb on - strand, within MPMX20_03735at 3939.578 kb on - strand, within MPMX20_03735at 3939.581 kb on + strand, within MPMX20_03735at 3939.589 kb on - strand, within MPMX20_03735at 3939.589 kb on - strand, within MPMX20_03735at 3939.594 kb on - strand, within MPMX20_03735at 3939.605 kb on - strand, within MPMX20_03735at 3939.614 kb on - strand, within MPMX20_03735at 3939.664 kb on + strand, within MPMX20_03735at 3939.734 kb on - strand, within MPMX20_03735at 3939.742 kb on - strand, within MPMX20_03735at 3939.806 kb on + strand, within MPMX20_03735at 3939.806 kb on - strand, within MPMX20_03735at 3939.814 kb on - strand, within MPMX20_03735at 3939.814 kb on - strand, within MPMX20_03735at 3939.814 kb on - strand, within MPMX20_03735at 3939.814 kb on - strand, within MPMX20_03735at 3939.814 kb on - strand, within MPMX20_03735at 3939.834 kb on + strand, within MPMX20_03735at 3939.842 kb on - strand, within MPMX20_03735at 3939.842 kb on - strand, within MPMX20_03735at 3939.862 kb on + strand, within MPMX20_03735at 3939.870 kb on - strand, within MPMX20_03735at 3939.871 kb on - strand, within MPMX20_03735at 3939.917 kb on + strand, within MPMX20_03735at 3939.920 kb on - strand, within MPMX20_03735at 3939.987 kb on - strand, within MPMX20_03735at 3939.987 kb on - strand, within MPMX20_03735at 3940.061 kb on + strand, within MPMX20_03735at 3940.128 kb on + strand, within MPMX20_03735at 3940.128 kb on + strand, within MPMX20_03735at 3940.128 kb on + strand, within MPMX20_03735at 3940.136 kb on - strand, within MPMX20_03735at 3940.136 kb on - strand, within MPMX20_03735at 3940.156 kb on + strand, within MPMX20_03735at 3940.156 kb on + strand, within MPMX20_03735at 3940.164 kb on - strand, within MPMX20_03735at 3940.164 kb on - strand, within MPMX20_03735at 3940.189 kb on - strand, within MPMX20_03735at 3940.212 kb on + strand, within MPMX20_03735at 3940.220 kb on - strand, within MPMX20_03735at 3940.262 kb on + strand, within MPMX20_03735at 3940.289 kb on + strand, within MPMX20_03735at 3940.289 kb on + strand, within MPMX20_03735at 3940.289 kb on + strand, within MPMX20_03735at 3940.297 kb on - strand, within MPMX20_03735at 3940.299 kb on + strand, within MPMX20_03735at 3940.307 kb on - strand, within MPMX20_03735at 3940.307 kb on - strand, within MPMX20_03735at 3940.307 kb on - strand, within MPMX20_03735at 3940.307 kb on - strand, within MPMX20_03735at 3940.323 kb on - strand, within MPMX20_03735at 3940.324 kb on + strand, within MPMX20_03735at 3940.359 kb on + strand, within MPMX20_03735at 3940.400 kb on - strand, within MPMX20_03735at 3940.451 kb on + strand, within MPMX20_03735at 3940.492 kb on + strand, within MPMX20_03735at 3940.502 kb on + strand, within MPMX20_03735at 3940.522 kb on + strand, within MPMX20_03735at 3940.651 kb on + strandat 3940.658 kb on - strandat 3940.683 kb on + strandat 3940.902 kb on + strandat 3940.981 kb on + strandat 3940.991 kb on - strandat 3941.058 kb on + strand, within MPMX20_03737at 3941.067 kb on + strand, within MPMX20_03737at 3941.072 kb on + strand, within MPMX20_03737at 3941.072 kb on + strand, within MPMX20_03737at 3941.075 kb on - strand, within MPMX20_03737at 3941.080 kb on - strand, within MPMX20_03737at 3941.080 kb on - strand, within MPMX20_03737at 3941.080 kb on - strand, within MPMX20_03737at 3941.080 kb on - strand, within MPMX20_03737at 3941.080 kb on - strand, within MPMX20_03737at 3941.123 kb on - strand, within MPMX20_03737at 3941.261 kb on + strand, within MPMX20_03737at 3941.271 kb on + strand, within MPMX20_03737at 3941.279 kb on - strand, within MPMX20_03737at 3941.482 kb on - strand, within MPMX20_03737at 3941.517 kb on - strand, within MPMX20_03737at 3941.689 kb on - strand, within MPMX20_03737

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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3,938,380 - MPMX20_03734 0.55 -0.3
3,938,408 - MPMX20_03734 0.56 +0.2
3,938,433 + MPMX20_03734 0.57 -2.8
3,938,476 - MPMX20_03734 0.59 -0.0
3,938,530 - MPMX20_03734 0.62 +0.3
3,938,639 + MPMX20_03734 0.67 -1.2
3,938,717 + MPMX20_03734 0.70 +0.2
3,938,725 - MPMX20_03734 0.71 -0.6
3,938,738 - MPMX20_03734 0.71 +0.0
3,938,738 - MPMX20_03734 0.71 +0.2
3,938,738 - MPMX20_03734 0.71 +0.0
3,938,738 - MPMX20_03734 0.71 +1.1
3,938,773 + MPMX20_03734 0.73 -0.3
3,938,783 + MPMX20_03734 0.73 +0.8
3,938,909 - MPMX20_03734 0.79 -0.1
3,938,932 + MPMX20_03734 0.80 +1.1
3,938,932 + MPMX20_03734 0.80 +0.2
3,938,932 + MPMX20_03734 0.80 +0.6
3,938,940 - MPMX20_03734 0.81 -0.5
3,938,940 - MPMX20_03734 0.81 +0.4
3,939,018 - MPMX20_03734 0.84 -1.5
3,939,045 + MPMX20_03734 0.85 -0.6
3,939,070 - MPMX20_03734 0.86 -0.4
3,939,081 - MPMX20_03734 0.87 +0.7
3,939,081 - MPMX20_03734 0.87 +2.0
3,939,081 - MPMX20_03734 0.87 +1.2
3,939,130 + MPMX20_03734 0.89 -1.2
3,939,130 + MPMX20_03734 0.89 -2.3
3,939,140 + MPMX20_03734 0.90 +0.1
3,939,143 - MPMX20_03734 0.90 +0.5
3,939,143 - MPMX20_03734 0.90 +1.2
3,939,188 - +1.0
3,939,195 + +1.0
3,939,198 - -0.6
3,939,203 - -1.1
3,939,396 - -0.8
3,939,401 + -0.2
3,939,510 - -0.3
3,939,539 + MPMX20_03735 0.12 +2.8
3,939,547 - MPMX20_03735 0.13 -0.8
3,939,578 - MPMX20_03735 0.15 -0.0
3,939,581 + MPMX20_03735 0.15 +0.3
3,939,589 - MPMX20_03735 0.16 -1.2
3,939,589 - MPMX20_03735 0.16 -0.2
3,939,594 - MPMX20_03735 0.16 -0.1
3,939,605 - MPMX20_03735 0.17 +2.2
3,939,614 - MPMX20_03735 0.18 +3.0
3,939,664 + MPMX20_03735 0.21 -0.4
3,939,734 - MPMX20_03735 0.27 -0.3
3,939,742 - MPMX20_03735 0.27 +2.1
3,939,806 + MPMX20_03735 0.32 +0.0
3,939,806 - MPMX20_03735 0.32 -0.4
3,939,814 - MPMX20_03735 0.33 -0.3
3,939,814 - MPMX20_03735 0.33 +0.2
3,939,814 - MPMX20_03735 0.33 +0.4
3,939,814 - MPMX20_03735 0.33 +0.2
3,939,814 - MPMX20_03735 0.33 -1.1
3,939,834 + MPMX20_03735 0.34 -0.9
3,939,842 - MPMX20_03735 0.35 -1.1
3,939,842 - MPMX20_03735 0.35 -0.7
3,939,862 + MPMX20_03735 0.36 -0.6
3,939,870 - MPMX20_03735 0.37 +0.8
3,939,871 - MPMX20_03735 0.37 -0.3
3,939,917 + MPMX20_03735 0.40 -0.2
3,939,920 - MPMX20_03735 0.41 -0.8
3,939,987 - MPMX20_03735 0.46 -0.8
3,939,987 - MPMX20_03735 0.46 -1.1
3,940,061 + MPMX20_03735 0.51 -0.2
3,940,128 + MPMX20_03735 0.56 +0.4
3,940,128 + MPMX20_03735 0.56 -0.2
3,940,128 + MPMX20_03735 0.56 -0.6
3,940,136 - MPMX20_03735 0.57 -0.4
3,940,136 - MPMX20_03735 0.57 -1.4
3,940,156 + MPMX20_03735 0.58 +0.3
3,940,156 + MPMX20_03735 0.58 -0.3
3,940,164 - MPMX20_03735 0.59 +0.4
3,940,164 - MPMX20_03735 0.59 -0.3
3,940,189 - MPMX20_03735 0.61 -1.6
3,940,212 + MPMX20_03735 0.62 -0.4
3,940,220 - MPMX20_03735 0.63 -1.1
3,940,262 + MPMX20_03735 0.66 -0.4
3,940,289 + MPMX20_03735 0.68 -0.4
3,940,289 + MPMX20_03735 0.68 +0.1
3,940,289 + MPMX20_03735 0.68 -0.4
3,940,297 - MPMX20_03735 0.69 +0.9
3,940,299 + MPMX20_03735 0.69 -1.0
3,940,307 - MPMX20_03735 0.69 +0.7
3,940,307 - MPMX20_03735 0.69 +0.3
3,940,307 - MPMX20_03735 0.69 -0.2
3,940,307 - MPMX20_03735 0.69 -0.3
3,940,323 - MPMX20_03735 0.71 -0.4
3,940,324 + MPMX20_03735 0.71 +0.2
3,940,359 + MPMX20_03735 0.73 -0.6
3,940,400 - MPMX20_03735 0.76 -1.2
3,940,451 + MPMX20_03735 0.80 -0.5
3,940,492 + MPMX20_03735 0.83 +0.1
3,940,502 + MPMX20_03735 0.84 -0.7
3,940,522 + MPMX20_03735 0.86 -1.0
3,940,651 + +0.6
3,940,658 - +0.7
3,940,683 + +0.2
3,940,902 + -0.2
3,940,981 + -0.4
3,940,991 - -0.4
3,941,058 + MPMX20_03737 0.11 -1.0
3,941,067 + MPMX20_03737 0.11 -0.3
3,941,072 + MPMX20_03737 0.12 +0.4
3,941,072 + MPMX20_03737 0.12 -0.6
3,941,075 - MPMX20_03737 0.12 -0.6
3,941,080 - MPMX20_03737 0.12 -0.5
3,941,080 - MPMX20_03737 0.12 -0.4
3,941,080 - MPMX20_03737 0.12 -0.2
3,941,080 - MPMX20_03737 0.12 -0.9
3,941,080 - MPMX20_03737 0.12 -0.6
3,941,123 - MPMX20_03737 0.16 +0.8
3,941,261 + MPMX20_03737 0.26 -1.4
3,941,271 + MPMX20_03737 0.27 -0.3
3,941,279 - MPMX20_03737 0.28 -1.8
3,941,482 - MPMX20_03737 0.44 -0.5
3,941,517 - MPMX20_03737 0.47 -0.6
3,941,689 - MPMX20_03737 0.60 -1.0

Or see this region's nucleotide sequence