Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03647

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03645 and MPMX20_03646 are separated by 54 nucleotidesMPMX20_03646 and MPMX20_03647 overlap by 1 nucleotidesMPMX20_03647 and MPMX20_03648 are separated by 167 nucleotides MPMX20_03645: MPMX20_03645 - 7-carboxy-7-deazaguanine synthase, at 3,833,701 to 3,834,372 _03645 MPMX20_03646: MPMX20_03646 - Putative N-acetylmannosamine-6-phosphate 2-epimerase, at 3,834,427 to 3,835,134 _03646 MPMX20_03647: MPMX20_03647 - PTS system glucose-specific EIICBA component, at 3,835,134 to 3,836,693 _03647 MPMX20_03648: MPMX20_03648 - putative HTH-type transcriptional regulator YbbH, at 3,836,861 to 3,837,685 _03648 Position (kb) 3835 3836 3837Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3834.161 kb on - strand, within MPMX20_03645at 3834.211 kb on - strand, within MPMX20_03645at 3834.244 kb on + strand, within MPMX20_03645at 3834.341 kb on + strandat 3834.341 kb on + strandat 3834.341 kb on + strandat 3834.349 kb on - strandat 3834.349 kb on - strandat 3834.426 kb on + strandat 3834.461 kb on + strandat 3834.493 kb on + strandat 3834.501 kb on - strand, within MPMX20_03646at 3834.531 kb on + strand, within MPMX20_03646at 3834.566 kb on + strand, within MPMX20_03646at 3834.636 kb on - strand, within MPMX20_03646at 3834.648 kb on + strand, within MPMX20_03646at 3834.678 kb on - strand, within MPMX20_03646at 3834.756 kb on + strand, within MPMX20_03646at 3834.778 kb on + strand, within MPMX20_03646at 3834.904 kb on - strand, within MPMX20_03646at 3834.961 kb on - strand, within MPMX20_03646at 3834.961 kb on - strand, within MPMX20_03646at 3835.010 kb on + strand, within MPMX20_03646at 3835.010 kb on + strand, within MPMX20_03646at 3835.015 kb on + strand, within MPMX20_03646at 3835.018 kb on - strand, within MPMX20_03646at 3835.018 kb on - strand, within MPMX20_03646at 3835.027 kb on + strand, within MPMX20_03646at 3835.060 kb on + strand, within MPMX20_03646at 3835.068 kb on - strandat 3835.068 kb on - strandat 3835.068 kb on - strandat 3835.086 kb on + strandat 3835.086 kb on + strandat 3835.112 kb on + strandat 3835.114 kb on - strandat 3835.209 kb on - strandat 3835.214 kb on + strandat 3835.244 kb on + strandat 3835.252 kb on - strandat 3835.295 kb on + strand, within MPMX20_03647at 3835.302 kb on + strand, within MPMX20_03647at 3835.308 kb on - strand, within MPMX20_03647at 3835.518 kb on - strand, within MPMX20_03647at 3835.632 kb on - strand, within MPMX20_03647at 3835.710 kb on - strand, within MPMX20_03647at 3835.715 kb on - strand, within MPMX20_03647at 3835.765 kb on + strand, within MPMX20_03647at 3835.786 kb on + strand, within MPMX20_03647at 3835.888 kb on - strand, within MPMX20_03647at 3835.911 kb on - strand, within MPMX20_03647at 3835.991 kb on + strand, within MPMX20_03647at 3836.048 kb on + strand, within MPMX20_03647at 3836.223 kb on + strand, within MPMX20_03647at 3836.282 kb on + strand, within MPMX20_03647at 3836.294 kb on + strand, within MPMX20_03647at 3836.451 kb on - strand, within MPMX20_03647at 3836.458 kb on - strand, within MPMX20_03647at 3836.460 kb on - strand, within MPMX20_03647at 3836.477 kb on + strand, within MPMX20_03647at 3836.487 kb on + strand, within MPMX20_03647at 3836.487 kb on + strand, within MPMX20_03647at 3836.487 kb on + strand, within MPMX20_03647at 3836.506 kb on + strand, within MPMX20_03647at 3836.611 kb on - strandat 3836.826 kb on + strandat 3836.828 kb on + strandat 3836.906 kb on + strandat 3836.916 kb on + strandat 3836.916 kb on + strandat 3836.924 kb on - strandat 3836.924 kb on - strandat 3836.924 kb on - strandat 3836.924 kb on - strandat 3836.924 kb on - strandat 3837.056 kb on - strand, within MPMX20_03648at 3837.091 kb on - strand, within MPMX20_03648at 3837.100 kb on + strand, within MPMX20_03648at 3837.100 kb on + strand, within MPMX20_03648at 3837.126 kb on - strand, within MPMX20_03648at 3837.143 kb on + strand, within MPMX20_03648at 3837.143 kb on + strand, within MPMX20_03648at 3837.150 kb on + strand, within MPMX20_03648at 3837.150 kb on + strand, within MPMX20_03648at 3837.158 kb on - strand, within MPMX20_03648at 3837.158 kb on - strand, within MPMX20_03648at 3837.158 kb on - strand, within MPMX20_03648at 3837.158 kb on - strand, within MPMX20_03648at 3837.163 kb on - strand, within MPMX20_03648at 3837.164 kb on + strand, within MPMX20_03648at 3837.164 kb on - strand, within MPMX20_03648at 3837.172 kb on - strand, within MPMX20_03648at 3837.174 kb on + strand, within MPMX20_03648at 3837.174 kb on + strand, within MPMX20_03648at 3837.174 kb on + strand, within MPMX20_03648at 3837.182 kb on - strand, within MPMX20_03648at 3837.182 kb on - strand, within MPMX20_03648at 3837.182 kb on - strand, within MPMX20_03648at 3837.182 kb on - strand, within MPMX20_03648at 3837.184 kb on + strand, within MPMX20_03648at 3837.184 kb on + strand, within MPMX20_03648at 3837.187 kb on + strand, within MPMX20_03648at 3837.192 kb on - strand, within MPMX20_03648at 3837.237 kb on - strand, within MPMX20_03648at 3837.239 kb on + strand, within MPMX20_03648at 3837.247 kb on - strand, within MPMX20_03648at 3837.247 kb on - strand, within MPMX20_03648at 3837.307 kb on + strand, within MPMX20_03648at 3837.307 kb on + strand, within MPMX20_03648at 3837.307 kb on + strand, within MPMX20_03648at 3837.315 kb on - strand, within MPMX20_03648at 3837.315 kb on - strand, within MPMX20_03648at 3837.320 kb on - strand, within MPMX20_03648at 3837.332 kb on + strand, within MPMX20_03648at 3837.332 kb on + strand, within MPMX20_03648at 3837.332 kb on + strand, within MPMX20_03648at 3837.340 kb on - strand, within MPMX20_03648at 3837.367 kb on + strand, within MPMX20_03648at 3837.375 kb on - strand, within MPMX20_03648at 3837.382 kb on + strand, within MPMX20_03648at 3837.397 kb on - strand, within MPMX20_03648at 3837.407 kb on - strand, within MPMX20_03648at 3837.429 kb on - strand, within MPMX20_03648at 3837.447 kb on + strand, within MPMX20_03648at 3837.449 kb on + strand, within MPMX20_03648at 3837.482 kb on - strand, within MPMX20_03648at 3837.497 kb on - strand, within MPMX20_03648at 3837.510 kb on - strand, within MPMX20_03648at 3837.531 kb on + strand, within MPMX20_03648at 3837.533 kb on + strand, within MPMX20_03648at 3837.533 kb on + strand, within MPMX20_03648at 3837.533 kb on + strand, within MPMX20_03648at 3837.549 kb on + strand, within MPMX20_03648at 3837.549 kb on + strand, within MPMX20_03648at 3837.549 kb on + strand, within MPMX20_03648at 3837.557 kb on - strand, within MPMX20_03648at 3837.560 kb on + strand, within MPMX20_03648at 3837.562 kb on - strand, within MPMX20_03648at 3837.568 kb on - strand, within MPMX20_03648at 3837.572 kb on - strand, within MPMX20_03648at 3837.576 kb on + strand, within MPMX20_03648at 3837.576 kb on + strand, within MPMX20_03648at 3837.576 kb on + strand, within MPMX20_03648at 3837.576 kb on + strand, within MPMX20_03648at 3837.576 kb on + strand, within MPMX20_03648at 3837.590 kb on + strand, within MPMX20_03648at 3837.603 kb on + strandat 3837.603 kb on + strandat 3837.603 kb on + strandat 3837.609 kb on + strandat 3837.610 kb on + strandat 3837.624 kb on + strandat 3837.635 kb on + strandat 3837.649 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.660 kb on + strandat 3837.663 kb on - strandat 3837.666 kb on + strandat 3837.668 kb on + strandat 3837.668 kb on + strandat 3837.668 kb on + strandat 3837.668 kb on + strandat 3837.668 kb on - strandat 3837.668 kb on - strandat 3837.668 kb on - strandat 3837.673 kb on - strandat 3837.676 kb on - strandat 3837.682 kb on + strandat 3837.682 kb on + strandat 3837.682 kb on + strandat 3837.682 kb on + strandat 3837.682 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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3,834,161 - MPMX20_03645 0.68 -0.9
3,834,211 - MPMX20_03645 0.76 -0.8
3,834,244 + MPMX20_03645 0.81 +0.8
3,834,341 + -0.4
3,834,341 + +0.1
3,834,341 + -0.0
3,834,349 - -1.3
3,834,349 - -0.2
3,834,426 + -1.5
3,834,461 + +0.3
3,834,493 + -0.3
3,834,501 - MPMX20_03646 0.10 -1.2
3,834,531 + MPMX20_03646 0.15 +0.6
3,834,566 + MPMX20_03646 0.20 +0.5
3,834,636 - MPMX20_03646 0.30 -0.5
3,834,648 + MPMX20_03646 0.31 -0.4
3,834,678 - MPMX20_03646 0.35 -0.3
3,834,756 + MPMX20_03646 0.46 +0.7
3,834,778 + MPMX20_03646 0.50 -1.1
3,834,904 - MPMX20_03646 0.67 +0.7
3,834,961 - MPMX20_03646 0.75 -0.1
3,834,961 - MPMX20_03646 0.75 +2.0
3,835,010 + MPMX20_03646 0.82 -0.8
3,835,010 + MPMX20_03646 0.82 +0.9
3,835,015 + MPMX20_03646 0.83 -0.1
3,835,018 - MPMX20_03646 0.83 -0.3
3,835,018 - MPMX20_03646 0.83 +0.2
3,835,027 + MPMX20_03646 0.85 +0.2
3,835,060 + MPMX20_03646 0.89 -0.3
3,835,068 - -0.3
3,835,068 - -0.4
3,835,068 - +0.3
3,835,086 + -2.2
3,835,086 + +0.4
3,835,112 + -1.5
3,835,114 - +0.6
3,835,209 - -1.1
3,835,214 + +0.0
3,835,244 + -0.9
3,835,252 - +0.8
3,835,295 + MPMX20_03647 0.10 +0.5
3,835,302 + MPMX20_03647 0.11 -0.6
3,835,308 - MPMX20_03647 0.11 +0.3
3,835,518 - MPMX20_03647 0.25 -1.3
3,835,632 - MPMX20_03647 0.32 -0.3
3,835,710 - MPMX20_03647 0.37 +0.8
3,835,715 - MPMX20_03647 0.37 +0.1
3,835,765 + MPMX20_03647 0.40 +0.5
3,835,786 + MPMX20_03647 0.42 -0.4
3,835,888 - MPMX20_03647 0.48 -3.0
3,835,911 - MPMX20_03647 0.50 -0.6
3,835,991 + MPMX20_03647 0.55 +0.2
3,836,048 + MPMX20_03647 0.59 -0.7
3,836,223 + MPMX20_03647 0.70 +0.3
3,836,282 + MPMX20_03647 0.74 -0.1
3,836,294 + MPMX20_03647 0.74 +0.1
3,836,451 - MPMX20_03647 0.84 +0.4
3,836,458 - MPMX20_03647 0.85 +1.3
3,836,460 - MPMX20_03647 0.85 -0.8
3,836,477 + MPMX20_03647 0.86 -0.2
3,836,487 + MPMX20_03647 0.87 -0.8
3,836,487 + MPMX20_03647 0.87 -1.2
3,836,487 + MPMX20_03647 0.87 -0.2
3,836,506 + MPMX20_03647 0.88 -0.5
3,836,611 - -0.1
3,836,826 + +2.0
3,836,828 + +0.4
3,836,906 + -1.2
3,836,916 + -0.6
3,836,916 + -0.3
3,836,924 - -0.3
3,836,924 - -1.3
3,836,924 - +0.1
3,836,924 - -1.0
3,836,924 - -3.4
3,837,056 - MPMX20_03648 0.24 +0.2
3,837,091 - MPMX20_03648 0.28 +0.2
3,837,100 + MPMX20_03648 0.29 -0.9
3,837,100 + MPMX20_03648 0.29 +1.3
3,837,126 - MPMX20_03648 0.32 +0.3
3,837,143 + MPMX20_03648 0.34 +0.7
3,837,143 + MPMX20_03648 0.34 -0.0
3,837,150 + MPMX20_03648 0.35 -1.0
3,837,150 + MPMX20_03648 0.35 -3.3
3,837,158 - MPMX20_03648 0.36 -0.3
3,837,158 - MPMX20_03648 0.36 -0.0
3,837,158 - MPMX20_03648 0.36 +0.2
3,837,158 - MPMX20_03648 0.36 -0.8
3,837,163 - MPMX20_03648 0.37 +0.2
3,837,164 + MPMX20_03648 0.37 -0.3
3,837,164 - MPMX20_03648 0.37 -1.4
3,837,172 - MPMX20_03648 0.38 -0.6
3,837,174 + MPMX20_03648 0.38 -2.2
3,837,174 + MPMX20_03648 0.38 +0.8
3,837,174 + MPMX20_03648 0.38 -1.2
3,837,182 - MPMX20_03648 0.39 -0.0
3,837,182 - MPMX20_03648 0.39 -1.0
3,837,182 - MPMX20_03648 0.39 -0.6
3,837,182 - MPMX20_03648 0.39 +1.0
3,837,184 + MPMX20_03648 0.39 -1.2
3,837,184 + MPMX20_03648 0.39 -1.6
3,837,187 + MPMX20_03648 0.40 -2.3
3,837,192 - MPMX20_03648 0.40 -1.6
3,837,237 - MPMX20_03648 0.46 -1.0
3,837,239 + MPMX20_03648 0.46 -0.9
3,837,247 - MPMX20_03648 0.47 -0.9
3,837,247 - MPMX20_03648 0.47 +0.5
3,837,307 + MPMX20_03648 0.54 -0.6
3,837,307 + MPMX20_03648 0.54 -0.5
3,837,307 + MPMX20_03648 0.54 -1.0
3,837,315 - MPMX20_03648 0.55 -0.8
3,837,315 - MPMX20_03648 0.55 -0.2
3,837,320 - MPMX20_03648 0.56 -1.2
3,837,332 + MPMX20_03648 0.57 -1.5
3,837,332 + MPMX20_03648 0.57 -0.2
3,837,332 + MPMX20_03648 0.57 -0.2
3,837,340 - MPMX20_03648 0.58 -0.4
3,837,367 + MPMX20_03648 0.61 +0.1
3,837,375 - MPMX20_03648 0.62 -2.0
3,837,382 + MPMX20_03648 0.63 -0.6
3,837,397 - MPMX20_03648 0.65 +0.3
3,837,407 - MPMX20_03648 0.66 +0.4
3,837,429 - MPMX20_03648 0.69 +0.4
3,837,447 + MPMX20_03648 0.71 -0.7
3,837,449 + MPMX20_03648 0.71 -0.3
3,837,482 - MPMX20_03648 0.75 +0.8
3,837,497 - MPMX20_03648 0.77 -0.8
3,837,510 - MPMX20_03648 0.79 -1.4
3,837,531 + MPMX20_03648 0.81 -0.2
3,837,533 + MPMX20_03648 0.81 -0.4
3,837,533 + MPMX20_03648 0.81 -0.4
3,837,533 + MPMX20_03648 0.81 -0.6
3,837,549 + MPMX20_03648 0.83 -2.0
3,837,549 + MPMX20_03648 0.83 -1.4
3,837,549 + MPMX20_03648 0.83 -0.4
3,837,557 - MPMX20_03648 0.84 +1.1
3,837,560 + MPMX20_03648 0.85 -0.9
3,837,562 - MPMX20_03648 0.85 -1.9
3,837,568 - MPMX20_03648 0.86 -1.4
3,837,572 - MPMX20_03648 0.86 -0.8
3,837,576 + MPMX20_03648 0.87 -1.7
3,837,576 + MPMX20_03648 0.87 -0.5
3,837,576 + MPMX20_03648 0.87 +1.3
3,837,576 + MPMX20_03648 0.87 +0.1
3,837,576 + MPMX20_03648 0.87 +0.1
3,837,590 + MPMX20_03648 0.88 -0.0
3,837,603 + -0.9
3,837,603 + -2.6
3,837,603 + +0.2
3,837,609 + +0.4
3,837,610 + +1.2
3,837,624 + -1.7
3,837,635 + +0.1
3,837,649 + -0.5
3,837,660 + +0.4
3,837,660 + -1.4
3,837,660 + +0.7
3,837,660 + -1.6
3,837,660 + +0.7
3,837,660 + -0.7
3,837,660 + +0.3
3,837,660 + -0.5
3,837,660 + -0.4
3,837,660 + +0.5
3,837,660 + -0.9
3,837,660 + -0.3
3,837,660 + +0.1
3,837,660 + +0.1
3,837,660 + +1.0
3,837,660 + +0.7
3,837,660 + -0.8
3,837,660 + -0.3
3,837,660 + -0.6
3,837,660 + +0.3
3,837,660 + +0.4
3,837,660 + -1.6
3,837,663 - -0.8
3,837,666 + +0.9
3,837,668 + -1.0
3,837,668 + +0.3
3,837,668 + -1.0
3,837,668 + -1.1
3,837,668 - +0.2
3,837,668 - +0.5
3,837,668 - -1.9
3,837,673 - -1.3
3,837,676 - -0.4
3,837,682 + -0.6
3,837,682 + -0.4
3,837,682 + -0.3
3,837,682 + -0.4
3,837,682 + -2.2

Or see this region's nucleotide sequence