Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03645 and MPMX20_03646 are separated by 54 nucleotides MPMX20_03646 and MPMX20_03647 overlap by 1 nucleotides MPMX20_03647 and MPMX20_03648 are separated by 167 nucleotides
MPMX20_03645: MPMX20_03645 - 7-carboxy-7-deazaguanine synthase, at 3,833,701 to 3,834,372
_03645
MPMX20_03646: MPMX20_03646 - Putative N-acetylmannosamine-6-phosphate 2-epimerase, at 3,834,427 to 3,835,134
_03646
MPMX20_03647: MPMX20_03647 - PTS system glucose-specific EIICBA component, at 3,835,134 to 3,836,693
_03647
MPMX20_03648: MPMX20_03648 - putative HTH-type transcriptional regulator YbbH, at 3,836,861 to 3,837,685
_03648
Position (kb)
3835
3836
3837 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3834.161 kb on - strand, within MPMX20_03645 at 3834.211 kb on - strand, within MPMX20_03645 at 3834.244 kb on + strand, within MPMX20_03645 at 3834.341 kb on + strand at 3834.341 kb on + strand at 3834.341 kb on + strand at 3834.349 kb on - strand at 3834.349 kb on - strand at 3834.426 kb on + strand at 3834.461 kb on + strand at 3834.493 kb on + strand at 3834.501 kb on - strand, within MPMX20_03646 at 3834.531 kb on + strand, within MPMX20_03646 at 3834.566 kb on + strand, within MPMX20_03646 at 3834.636 kb on - strand, within MPMX20_03646 at 3834.648 kb on + strand, within MPMX20_03646 at 3834.678 kb on - strand, within MPMX20_03646 at 3834.756 kb on + strand, within MPMX20_03646 at 3834.778 kb on + strand, within MPMX20_03646 at 3834.904 kb on - strand, within MPMX20_03646 at 3834.961 kb on - strand, within MPMX20_03646 at 3834.961 kb on - strand, within MPMX20_03646 at 3835.010 kb on + strand, within MPMX20_03646 at 3835.010 kb on + strand, within MPMX20_03646 at 3835.015 kb on + strand, within MPMX20_03646 at 3835.018 kb on - strand, within MPMX20_03646 at 3835.018 kb on - strand, within MPMX20_03646 at 3835.027 kb on + strand, within MPMX20_03646 at 3835.060 kb on + strand, within MPMX20_03646 at 3835.068 kb on - strand at 3835.068 kb on - strand at 3835.068 kb on - strand at 3835.086 kb on + strand at 3835.086 kb on + strand at 3835.112 kb on + strand at 3835.114 kb on - strand at 3835.209 kb on - strand at 3835.214 kb on + strand at 3835.244 kb on + strand at 3835.252 kb on - strand at 3835.295 kb on + strand, within MPMX20_03647 at 3835.302 kb on + strand, within MPMX20_03647 at 3835.308 kb on - strand, within MPMX20_03647 at 3835.518 kb on - strand, within MPMX20_03647 at 3835.632 kb on - strand, within MPMX20_03647 at 3835.710 kb on - strand, within MPMX20_03647 at 3835.715 kb on - strand, within MPMX20_03647 at 3835.765 kb on + strand, within MPMX20_03647 at 3835.786 kb on + strand, within MPMX20_03647 at 3835.888 kb on - strand, within MPMX20_03647 at 3835.911 kb on - strand, within MPMX20_03647 at 3835.991 kb on + strand, within MPMX20_03647 at 3836.048 kb on + strand, within MPMX20_03647 at 3836.223 kb on + strand, within MPMX20_03647 at 3836.282 kb on + strand, within MPMX20_03647 at 3836.294 kb on + strand, within MPMX20_03647 at 3836.451 kb on - strand, within MPMX20_03647 at 3836.458 kb on - strand, within MPMX20_03647 at 3836.460 kb on - strand, within MPMX20_03647 at 3836.477 kb on + strand, within MPMX20_03647 at 3836.487 kb on + strand, within MPMX20_03647 at 3836.487 kb on + strand, within MPMX20_03647 at 3836.487 kb on + strand, within MPMX20_03647 at 3836.506 kb on + strand, within MPMX20_03647 at 3836.611 kb on - strand at 3836.826 kb on + strand at 3836.828 kb on + strand at 3836.906 kb on + strand at 3836.916 kb on + strand at 3836.916 kb on + strand at 3836.924 kb on - strand at 3836.924 kb on - strand at 3836.924 kb on - strand at 3836.924 kb on - strand at 3836.924 kb on - strand at 3837.056 kb on - strand, within MPMX20_03648 at 3837.091 kb on - strand, within MPMX20_03648 at 3837.100 kb on + strand, within MPMX20_03648 at 3837.100 kb on + strand, within MPMX20_03648 at 3837.126 kb on - strand, within MPMX20_03648 at 3837.143 kb on + strand, within MPMX20_03648 at 3837.143 kb on + strand, within MPMX20_03648 at 3837.150 kb on + strand, within MPMX20_03648 at 3837.150 kb on + strand, within MPMX20_03648 at 3837.158 kb on - strand, within MPMX20_03648 at 3837.158 kb on - strand, within MPMX20_03648 at 3837.158 kb on - strand, within MPMX20_03648 at 3837.158 kb on - strand, within MPMX20_03648 at 3837.163 kb on - strand, within MPMX20_03648 at 3837.164 kb on + strand, within MPMX20_03648 at 3837.164 kb on - strand, within MPMX20_03648 at 3837.172 kb on - strand, within MPMX20_03648 at 3837.174 kb on + strand, within MPMX20_03648 at 3837.174 kb on + strand, within MPMX20_03648 at 3837.174 kb on + strand, within MPMX20_03648 at 3837.182 kb on - strand, within MPMX20_03648 at 3837.182 kb on - strand, within MPMX20_03648 at 3837.182 kb on - strand, within MPMX20_03648 at 3837.182 kb on - strand, within MPMX20_03648 at 3837.184 kb on + strand, within MPMX20_03648 at 3837.184 kb on + strand, within MPMX20_03648 at 3837.187 kb on + strand, within MPMX20_03648 at 3837.192 kb on - strand, within MPMX20_03648 at 3837.237 kb on - strand, within MPMX20_03648 at 3837.239 kb on + strand, within MPMX20_03648 at 3837.247 kb on - strand, within MPMX20_03648 at 3837.247 kb on - strand, within MPMX20_03648 at 3837.307 kb on + strand, within MPMX20_03648 at 3837.307 kb on + strand, within MPMX20_03648 at 3837.307 kb on + strand, within MPMX20_03648 at 3837.315 kb on - strand, within MPMX20_03648 at 3837.315 kb on - strand, within MPMX20_03648 at 3837.320 kb on - strand, within MPMX20_03648 at 3837.332 kb on + strand, within MPMX20_03648 at 3837.332 kb on + strand, within MPMX20_03648 at 3837.332 kb on + strand, within MPMX20_03648 at 3837.340 kb on - strand, within MPMX20_03648 at 3837.367 kb on + strand, within MPMX20_03648 at 3837.375 kb on - strand, within MPMX20_03648 at 3837.382 kb on + strand, within MPMX20_03648 at 3837.397 kb on - strand, within MPMX20_03648 at 3837.407 kb on - strand, within MPMX20_03648 at 3837.429 kb on - strand, within MPMX20_03648 at 3837.447 kb on + strand, within MPMX20_03648 at 3837.449 kb on + strand, within MPMX20_03648 at 3837.482 kb on - strand, within MPMX20_03648 at 3837.497 kb on - strand, within MPMX20_03648 at 3837.510 kb on - strand, within MPMX20_03648 at 3837.531 kb on + strand, within MPMX20_03648 at 3837.533 kb on + strand, within MPMX20_03648 at 3837.533 kb on + strand, within MPMX20_03648 at 3837.533 kb on + strand, within MPMX20_03648 at 3837.549 kb on + strand, within MPMX20_03648 at 3837.549 kb on + strand, within MPMX20_03648 at 3837.549 kb on + strand, within MPMX20_03648 at 3837.557 kb on - strand, within MPMX20_03648 at 3837.560 kb on + strand, within MPMX20_03648 at 3837.562 kb on - strand, within MPMX20_03648 at 3837.568 kb on - strand, within MPMX20_03648 at 3837.572 kb on - strand, within MPMX20_03648 at 3837.576 kb on + strand, within MPMX20_03648 at 3837.576 kb on + strand, within MPMX20_03648 at 3837.576 kb on + strand, within MPMX20_03648 at 3837.576 kb on + strand, within MPMX20_03648 at 3837.576 kb on + strand, within MPMX20_03648 at 3837.590 kb on + strand, within MPMX20_03648 at 3837.603 kb on + strand at 3837.603 kb on + strand at 3837.603 kb on + strand at 3837.609 kb on + strand at 3837.610 kb on + strand at 3837.624 kb on + strand at 3837.635 kb on + strand at 3837.649 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.660 kb on + strand at 3837.663 kb on - strand at 3837.666 kb on + strand at 3837.668 kb on + strand at 3837.668 kb on + strand at 3837.668 kb on + strand at 3837.668 kb on + strand at 3837.668 kb on - strand at 3837.668 kb on - strand at 3837.668 kb on - strand at 3837.673 kb on - strand at 3837.676 kb on - strand at 3837.682 kb on + strand at 3837.682 kb on + strand at 3837.682 kb on + strand at 3837.682 kb on + strand at 3837.682 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 3,834,161 - MPMX20_03645 0.68 -0.9 3,834,211 - MPMX20_03645 0.76 -0.8 3,834,244 + MPMX20_03645 0.81 +0.8 3,834,341 + -0.4 3,834,341 + +0.1 3,834,341 + -0.0 3,834,349 - -1.3 3,834,349 - -0.2 3,834,426 + -1.5 3,834,461 + +0.3 3,834,493 + -0.3 3,834,501 - MPMX20_03646 0.10 -1.2 3,834,531 + MPMX20_03646 0.15 +0.6 3,834,566 + MPMX20_03646 0.20 +0.5 3,834,636 - MPMX20_03646 0.30 -0.5 3,834,648 + MPMX20_03646 0.31 -0.4 3,834,678 - MPMX20_03646 0.35 -0.3 3,834,756 + MPMX20_03646 0.46 +0.7 3,834,778 + MPMX20_03646 0.50 -1.1 3,834,904 - MPMX20_03646 0.67 +0.7 3,834,961 - MPMX20_03646 0.75 -0.1 3,834,961 - MPMX20_03646 0.75 +2.0 3,835,010 + MPMX20_03646 0.82 -0.8 3,835,010 + MPMX20_03646 0.82 +0.9 3,835,015 + MPMX20_03646 0.83 -0.1 3,835,018 - MPMX20_03646 0.83 -0.3 3,835,018 - MPMX20_03646 0.83 +0.2 3,835,027 + MPMX20_03646 0.85 +0.2 3,835,060 + MPMX20_03646 0.89 -0.3 3,835,068 - -0.3 3,835,068 - -0.4 3,835,068 - +0.3 3,835,086 + -2.2 3,835,086 + +0.4 3,835,112 + -1.5 3,835,114 - +0.6 3,835,209 - -1.1 3,835,214 + +0.0 3,835,244 + -0.9 3,835,252 - +0.8 3,835,295 + MPMX20_03647 0.10 +0.5 3,835,302 + MPMX20_03647 0.11 -0.6 3,835,308 - MPMX20_03647 0.11 +0.3 3,835,518 - MPMX20_03647 0.25 -1.3 3,835,632 - MPMX20_03647 0.32 -0.3 3,835,710 - MPMX20_03647 0.37 +0.8 3,835,715 - MPMX20_03647 0.37 +0.1 3,835,765 + MPMX20_03647 0.40 +0.5 3,835,786 + MPMX20_03647 0.42 -0.4 3,835,888 - MPMX20_03647 0.48 -3.0 3,835,911 - MPMX20_03647 0.50 -0.6 3,835,991 + MPMX20_03647 0.55 +0.2 3,836,048 + MPMX20_03647 0.59 -0.7 3,836,223 + MPMX20_03647 0.70 +0.3 3,836,282 + MPMX20_03647 0.74 -0.1 3,836,294 + MPMX20_03647 0.74 +0.1 3,836,451 - MPMX20_03647 0.84 +0.4 3,836,458 - MPMX20_03647 0.85 +1.3 3,836,460 - MPMX20_03647 0.85 -0.8 3,836,477 + MPMX20_03647 0.86 -0.2 3,836,487 + MPMX20_03647 0.87 -0.8 3,836,487 + MPMX20_03647 0.87 -1.2 3,836,487 + MPMX20_03647 0.87 -0.2 3,836,506 + MPMX20_03647 0.88 -0.5 3,836,611 - -0.1 3,836,826 + +2.0 3,836,828 + +0.4 3,836,906 + -1.2 3,836,916 + -0.6 3,836,916 + -0.3 3,836,924 - -0.3 3,836,924 - -1.3 3,836,924 - +0.1 3,836,924 - -1.0 3,836,924 - -3.4 3,837,056 - MPMX20_03648 0.24 +0.2 3,837,091 - MPMX20_03648 0.28 +0.2 3,837,100 + MPMX20_03648 0.29 -0.9 3,837,100 + MPMX20_03648 0.29 +1.3 3,837,126 - MPMX20_03648 0.32 +0.3 3,837,143 + MPMX20_03648 0.34 +0.7 3,837,143 + MPMX20_03648 0.34 -0.0 3,837,150 + MPMX20_03648 0.35 -1.0 3,837,150 + MPMX20_03648 0.35 -3.3 3,837,158 - MPMX20_03648 0.36 -0.3 3,837,158 - MPMX20_03648 0.36 -0.0 3,837,158 - MPMX20_03648 0.36 +0.2 3,837,158 - MPMX20_03648 0.36 -0.8 3,837,163 - MPMX20_03648 0.37 +0.2 3,837,164 + MPMX20_03648 0.37 -0.3 3,837,164 - MPMX20_03648 0.37 -1.4 3,837,172 - MPMX20_03648 0.38 -0.6 3,837,174 + MPMX20_03648 0.38 -2.2 3,837,174 + MPMX20_03648 0.38 +0.8 3,837,174 + MPMX20_03648 0.38 -1.2 3,837,182 - MPMX20_03648 0.39 -0.0 3,837,182 - MPMX20_03648 0.39 -1.0 3,837,182 - MPMX20_03648 0.39 -0.6 3,837,182 - MPMX20_03648 0.39 +1.0 3,837,184 + MPMX20_03648 0.39 -1.2 3,837,184 + MPMX20_03648 0.39 -1.6 3,837,187 + MPMX20_03648 0.40 -2.3 3,837,192 - MPMX20_03648 0.40 -1.6 3,837,237 - MPMX20_03648 0.46 -1.0 3,837,239 + MPMX20_03648 0.46 -0.9 3,837,247 - MPMX20_03648 0.47 -0.9 3,837,247 - MPMX20_03648 0.47 +0.5 3,837,307 + MPMX20_03648 0.54 -0.6 3,837,307 + MPMX20_03648 0.54 -0.5 3,837,307 + MPMX20_03648 0.54 -1.0 3,837,315 - MPMX20_03648 0.55 -0.8 3,837,315 - MPMX20_03648 0.55 -0.2 3,837,320 - MPMX20_03648 0.56 -1.2 3,837,332 + MPMX20_03648 0.57 -1.5 3,837,332 + MPMX20_03648 0.57 -0.2 3,837,332 + MPMX20_03648 0.57 -0.2 3,837,340 - MPMX20_03648 0.58 -0.4 3,837,367 + MPMX20_03648 0.61 +0.1 3,837,375 - MPMX20_03648 0.62 -2.0 3,837,382 + MPMX20_03648 0.63 -0.6 3,837,397 - MPMX20_03648 0.65 +0.3 3,837,407 - MPMX20_03648 0.66 +0.4 3,837,429 - MPMX20_03648 0.69 +0.4 3,837,447 + MPMX20_03648 0.71 -0.7 3,837,449 + MPMX20_03648 0.71 -0.3 3,837,482 - MPMX20_03648 0.75 +0.8 3,837,497 - MPMX20_03648 0.77 -0.8 3,837,510 - MPMX20_03648 0.79 -1.4 3,837,531 + MPMX20_03648 0.81 -0.2 3,837,533 + MPMX20_03648 0.81 -0.4 3,837,533 + MPMX20_03648 0.81 -0.4 3,837,533 + MPMX20_03648 0.81 -0.6 3,837,549 + MPMX20_03648 0.83 -2.0 3,837,549 + MPMX20_03648 0.83 -1.4 3,837,549 + MPMX20_03648 0.83 -0.4 3,837,557 - MPMX20_03648 0.84 +1.1 3,837,560 + MPMX20_03648 0.85 -0.9 3,837,562 - MPMX20_03648 0.85 -1.9 3,837,568 - MPMX20_03648 0.86 -1.4 3,837,572 - MPMX20_03648 0.86 -0.8 3,837,576 + MPMX20_03648 0.87 -1.7 3,837,576 + MPMX20_03648 0.87 -0.5 3,837,576 + MPMX20_03648 0.87 +1.3 3,837,576 + MPMX20_03648 0.87 +0.1 3,837,576 + MPMX20_03648 0.87 +0.1 3,837,590 + MPMX20_03648 0.88 -0.0 3,837,603 + -0.9 3,837,603 + -2.6 3,837,603 + +0.2 3,837,609 + +0.4 3,837,610 + +1.2 3,837,624 + -1.7 3,837,635 + +0.1 3,837,649 + -0.5 3,837,660 + +0.4 3,837,660 + -1.4 3,837,660 + +0.7 3,837,660 + -1.6 3,837,660 + +0.7 3,837,660 + -0.7 3,837,660 + +0.3 3,837,660 + -0.5 3,837,660 + -0.4 3,837,660 + +0.5 3,837,660 + -0.9 3,837,660 + -0.3 3,837,660 + +0.1 3,837,660 + +0.1 3,837,660 + +1.0 3,837,660 + +0.7 3,837,660 + -0.8 3,837,660 + -0.3 3,837,660 + -0.6 3,837,660 + +0.3 3,837,660 + +0.4 3,837,660 + -1.6 3,837,663 - -0.8 3,837,666 + +0.9 3,837,668 + -1.0 3,837,668 + +0.3 3,837,668 + -1.0 3,837,668 + -1.1 3,837,668 - +0.2 3,837,668 - +0.5 3,837,668 - -1.9 3,837,673 - -1.3 3,837,676 - -0.4 3,837,682 + -0.6 3,837,682 + -0.4 3,837,682 + -0.3 3,837,682 + -0.4 3,837,682 + -2.2
Or see this region's nucleotide sequence