Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02776

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02774 and MPMX20_02775 are separated by 40 nucleotidesMPMX20_02775 and MPMX20_02776 overlap by 4 nucleotidesMPMX20_02776 and MPMX20_02777 are separated by 184 nucleotides MPMX20_02774: MPMX20_02774 - Inner membrane protein YecN, at 2,928,651 to 2,929,046 _02774 MPMX20_02775: MPMX20_02775 - Carboxy-S-adenosyl-L-methionine synthase, at 2,929,087 to 2,929,830 _02775 MPMX20_02776: MPMX20_02776 - tRNA U34 carboxymethyltransferase, at 2,929,827 to 2,930,798 _02776 MPMX20_02777: MPMX20_02777 - Copper homeostasis protein CutC, at 2,930,983 to 2,931,726 _02777 Position (kb) 2929 2930 2931Strain fitness (log2 ratio) -3 -2 -1 0 1at 2928.860 kb on + strand, within MPMX20_02774at 2928.860 kb on + strand, within MPMX20_02774at 2928.870 kb on + strand, within MPMX20_02774at 2928.877 kb on + strand, within MPMX20_02774at 2928.878 kb on - strand, within MPMX20_02774at 2928.885 kb on - strand, within MPMX20_02774at 2928.885 kb on - strand, within MPMX20_02774at 2928.937 kb on - strand, within MPMX20_02774at 2929.004 kb on + strand, within MPMX20_02774at 2929.012 kb on - strandat 2929.012 kb on - strandat 2929.046 kb on + strandat 2929.121 kb on + strandat 2929.135 kb on - strandat 2929.192 kb on + strand, within MPMX20_02775at 2929.233 kb on + strand, within MPMX20_02775at 2929.270 kb on + strand, within MPMX20_02775at 2929.270 kb on + strand, within MPMX20_02775at 2929.356 kb on - strand, within MPMX20_02775at 2929.504 kb on + strand, within MPMX20_02775at 2929.512 kb on - strand, within MPMX20_02775at 2929.512 kb on - strand, within MPMX20_02775at 2929.743 kb on - strand, within MPMX20_02775at 2929.748 kb on - strand, within MPMX20_02775at 2929.754 kb on - strand, within MPMX20_02775at 2929.759 kb on - strandat 2929.804 kb on - strandat 2929.814 kb on - strandat 2929.907 kb on - strandat 2929.993 kb on + strand, within MPMX20_02776at 2929.993 kb on + strand, within MPMX20_02776at 2929.993 kb on + strand, within MPMX20_02776at 2930.011 kb on - strand, within MPMX20_02776at 2930.034 kb on - strand, within MPMX20_02776at 2930.093 kb on + strand, within MPMX20_02776at 2930.134 kb on - strand, within MPMX20_02776at 2930.156 kb on - strand, within MPMX20_02776at 2930.187 kb on - strand, within MPMX20_02776at 2930.187 kb on - strand, within MPMX20_02776at 2930.206 kb on - strand, within MPMX20_02776at 2930.276 kb on + strand, within MPMX20_02776at 2930.284 kb on - strand, within MPMX20_02776at 2930.296 kb on + strand, within MPMX20_02776at 2930.314 kb on - strand, within MPMX20_02776at 2930.332 kb on + strand, within MPMX20_02776at 2930.354 kb on + strand, within MPMX20_02776at 2930.373 kb on - strand, within MPMX20_02776at 2930.653 kb on + strand, within MPMX20_02776at 2930.673 kb on - strand, within MPMX20_02776at 2930.683 kb on - strand, within MPMX20_02776at 2930.745 kb on + strandat 2930.745 kb on + strandat 2930.753 kb on - strandat 2930.775 kb on + strandat 2930.783 kb on - strandat 2930.815 kb on + strandat 2930.815 kb on + strandat 2930.823 kb on - strandat 2930.845 kb on + strandat 2930.847 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.884 kb on - strandat 2930.884 kb on - strandat 2930.946 kb on - strandat 2931.033 kb on + strandat 2931.042 kb on - strandat 2931.044 kb on - strandat 2931.144 kb on + strand, within MPMX20_02777at 2931.155 kb on - strand, within MPMX20_02777at 2931.155 kb on - strand, within MPMX20_02777at 2931.192 kb on + strand, within MPMX20_02777at 2931.192 kb on + strand, within MPMX20_02777at 2931.259 kb on + strand, within MPMX20_02777at 2931.274 kb on + strand, within MPMX20_02777at 2931.292 kb on - strand, within MPMX20_02777at 2931.395 kb on + strand, within MPMX20_02777at 2931.476 kb on + strand, within MPMX20_02777at 2931.648 kb on + strand, within MPMX20_02777at 2931.662 kb on + strandat 2931.691 kb on + strandat 2931.698 kb on - strandat 2931.771 kb on + strandat 2931.771 kb on + strandat 2931.771 kb on + strandat 2931.771 kb on + strandat 2931.788 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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2,928,860 + MPMX20_02774 0.53 -0.2
2,928,860 + MPMX20_02774 0.53 -0.5
2,928,870 + MPMX20_02774 0.55 -0.8
2,928,877 + MPMX20_02774 0.57 -0.2
2,928,878 - MPMX20_02774 0.57 -1.0
2,928,885 - MPMX20_02774 0.59 +0.5
2,928,885 - MPMX20_02774 0.59 +0.1
2,928,937 - MPMX20_02774 0.72 -0.2
2,929,004 + MPMX20_02774 0.89 -0.0
2,929,012 - -0.4
2,929,012 - -0.0
2,929,046 + -0.2
2,929,121 + -1.8
2,929,135 - -0.1
2,929,192 + MPMX20_02775 0.14 +0.1
2,929,233 + MPMX20_02775 0.20 -0.1
2,929,270 + MPMX20_02775 0.25 -0.9
2,929,270 + MPMX20_02775 0.25 -2.0
2,929,356 - MPMX20_02775 0.36 -1.2
2,929,504 + MPMX20_02775 0.56 -1.0
2,929,512 - MPMX20_02775 0.57 -1.2
2,929,512 - MPMX20_02775 0.57 -0.3
2,929,743 - MPMX20_02775 0.88 -1.6
2,929,748 - MPMX20_02775 0.89 -1.4
2,929,754 - MPMX20_02775 0.90 +0.1
2,929,759 - -1.1
2,929,804 - -0.9
2,929,814 - -0.9
2,929,907 - -1.2
2,929,993 + MPMX20_02776 0.17 -2.9
2,929,993 + MPMX20_02776 0.17 -0.7
2,929,993 + MPMX20_02776 0.17 -2.1
2,930,011 - MPMX20_02776 0.19 -0.8
2,930,034 - MPMX20_02776 0.21 +0.1
2,930,093 + MPMX20_02776 0.27 -1.7
2,930,134 - MPMX20_02776 0.32 -1.1
2,930,156 - MPMX20_02776 0.34 -0.2
2,930,187 - MPMX20_02776 0.37 -1.9
2,930,187 - MPMX20_02776 0.37 -2.0
2,930,206 - MPMX20_02776 0.39 -1.7
2,930,276 + MPMX20_02776 0.46 -2.2
2,930,284 - MPMX20_02776 0.47 -1.3
2,930,296 + MPMX20_02776 0.48 +0.5
2,930,314 - MPMX20_02776 0.50 +1.1
2,930,332 + MPMX20_02776 0.52 -1.1
2,930,354 + MPMX20_02776 0.54 -0.8
2,930,373 - MPMX20_02776 0.56 -0.6
2,930,653 + MPMX20_02776 0.85 -1.1
2,930,673 - MPMX20_02776 0.87 -3.4
2,930,683 - MPMX20_02776 0.88 -1.2
2,930,745 + -3.4
2,930,745 + +1.4
2,930,753 - -1.7
2,930,775 + -1.6
2,930,783 - -0.1
2,930,815 + -1.1
2,930,815 + +0.1
2,930,823 - -0.1
2,930,845 + +0.3
2,930,847 + +0.4
2,930,875 + -0.4
2,930,875 + -0.6
2,930,875 + +0.5
2,930,875 + -2.9
2,930,875 + -0.5
2,930,875 + +0.2
2,930,875 + +0.0
2,930,883 - +1.3
2,930,883 - -1.2
2,930,883 - -0.4
2,930,883 - +0.1
2,930,883 - +0.8
2,930,883 - -0.2
2,930,883 - +0.7
2,930,883 - -0.4
2,930,883 - +0.2
2,930,884 - +1.4
2,930,884 - -1.3
2,930,946 - -1.0
2,931,033 + -3.0
2,931,042 - +0.3
2,931,044 - +0.2
2,931,144 + MPMX20_02777 0.22 -0.4
2,931,155 - MPMX20_02777 0.23 -0.2
2,931,155 - MPMX20_02777 0.23 +0.5
2,931,192 + MPMX20_02777 0.28 -1.2
2,931,192 + MPMX20_02777 0.28 -1.6
2,931,259 + MPMX20_02777 0.37 -0.6
2,931,274 + MPMX20_02777 0.39 +1.0
2,931,292 - MPMX20_02777 0.42 -0.2
2,931,395 + MPMX20_02777 0.55 -0.4
2,931,476 + MPMX20_02777 0.66 -0.0
2,931,648 + MPMX20_02777 0.89 -0.5
2,931,662 + +1.0
2,931,691 + -1.6
2,931,698 - -0.2
2,931,771 + -1.1
2,931,771 + -0.2
2,931,771 + -0.7
2,931,771 + -0.7
2,931,788 + -0.8

Or see this region's nucleotide sequence