Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02774 and MPMX20_02775 are separated by 40 nucleotides MPMX20_02775 and MPMX20_02776 overlap by 4 nucleotides MPMX20_02776 and MPMX20_02777 are separated by 184 nucleotides
MPMX20_02774: MPMX20_02774 - Inner membrane protein YecN, at 2,928,651 to 2,929,046
_02774
MPMX20_02775: MPMX20_02775 - Carboxy-S-adenosyl-L-methionine synthase, at 2,929,087 to 2,929,830
_02775
MPMX20_02776: MPMX20_02776 - tRNA U34 carboxymethyltransferase, at 2,929,827 to 2,930,798
_02776
MPMX20_02777: MPMX20_02777 - Copper homeostasis protein CutC, at 2,930,983 to 2,931,726
_02777
Position (kb)
2929
2930
2931 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2928.860 kb on + strand, within MPMX20_02774 at 2928.860 kb on + strand, within MPMX20_02774 at 2928.870 kb on + strand, within MPMX20_02774 at 2928.877 kb on + strand, within MPMX20_02774 at 2928.878 kb on - strand, within MPMX20_02774 at 2928.885 kb on - strand, within MPMX20_02774 at 2928.885 kb on - strand, within MPMX20_02774 at 2928.937 kb on - strand, within MPMX20_02774 at 2929.004 kb on + strand, within MPMX20_02774 at 2929.012 kb on - strand at 2929.012 kb on - strand at 2929.046 kb on + strand at 2929.121 kb on + strand at 2929.135 kb on - strand at 2929.192 kb on + strand, within MPMX20_02775 at 2929.233 kb on + strand, within MPMX20_02775 at 2929.270 kb on + strand, within MPMX20_02775 at 2929.270 kb on + strand, within MPMX20_02775 at 2929.356 kb on - strand, within MPMX20_02775 at 2929.504 kb on + strand, within MPMX20_02775 at 2929.512 kb on - strand, within MPMX20_02775 at 2929.512 kb on - strand, within MPMX20_02775 at 2929.743 kb on - strand, within MPMX20_02775 at 2929.748 kb on - strand, within MPMX20_02775 at 2929.754 kb on - strand, within MPMX20_02775 at 2929.759 kb on - strand at 2929.804 kb on - strand at 2929.814 kb on - strand at 2929.907 kb on - strand at 2929.993 kb on + strand, within MPMX20_02776 at 2929.993 kb on + strand, within MPMX20_02776 at 2929.993 kb on + strand, within MPMX20_02776 at 2930.011 kb on - strand, within MPMX20_02776 at 2930.034 kb on - strand, within MPMX20_02776 at 2930.093 kb on + strand, within MPMX20_02776 at 2930.134 kb on - strand, within MPMX20_02776 at 2930.156 kb on - strand, within MPMX20_02776 at 2930.187 kb on - strand, within MPMX20_02776 at 2930.187 kb on - strand, within MPMX20_02776 at 2930.206 kb on - strand, within MPMX20_02776 at 2930.276 kb on + strand, within MPMX20_02776 at 2930.284 kb on - strand, within MPMX20_02776 at 2930.296 kb on + strand, within MPMX20_02776 at 2930.314 kb on - strand, within MPMX20_02776 at 2930.332 kb on + strand, within MPMX20_02776 at 2930.354 kb on + strand, within MPMX20_02776 at 2930.373 kb on - strand, within MPMX20_02776 at 2930.653 kb on + strand, within MPMX20_02776 at 2930.673 kb on - strand, within MPMX20_02776 at 2930.683 kb on - strand, within MPMX20_02776 at 2930.745 kb on + strand at 2930.745 kb on + strand at 2930.753 kb on - strand at 2930.775 kb on + strand at 2930.783 kb on - strand at 2930.815 kb on + strand at 2930.815 kb on + strand at 2930.823 kb on - strand at 2930.845 kb on + strand at 2930.847 kb on + strand at 2930.875 kb on + strand at 2930.875 kb on + strand at 2930.875 kb on + strand at 2930.875 kb on + strand at 2930.875 kb on + strand at 2930.875 kb on + strand at 2930.875 kb on + strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.883 kb on - strand at 2930.884 kb on - strand at 2930.884 kb on - strand at 2930.946 kb on - strand at 2931.033 kb on + strand at 2931.042 kb on - strand at 2931.044 kb on - strand at 2931.144 kb on + strand, within MPMX20_02777 at 2931.155 kb on - strand, within MPMX20_02777 at 2931.155 kb on - strand, within MPMX20_02777 at 2931.192 kb on + strand, within MPMX20_02777 at 2931.192 kb on + strand, within MPMX20_02777 at 2931.259 kb on + strand, within MPMX20_02777 at 2931.274 kb on + strand, within MPMX20_02777 at 2931.292 kb on - strand, within MPMX20_02777 at 2931.395 kb on + strand, within MPMX20_02777 at 2931.476 kb on + strand, within MPMX20_02777 at 2931.648 kb on + strand, within MPMX20_02777 at 2931.662 kb on + strand at 2931.691 kb on + strand at 2931.698 kb on - strand at 2931.771 kb on + strand at 2931.771 kb on + strand at 2931.771 kb on + strand at 2931.771 kb on + strand at 2931.788 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 2,928,860 + MPMX20_02774 0.53 -0.2 2,928,860 + MPMX20_02774 0.53 -0.5 2,928,870 + MPMX20_02774 0.55 -0.8 2,928,877 + MPMX20_02774 0.57 -0.2 2,928,878 - MPMX20_02774 0.57 -1.0 2,928,885 - MPMX20_02774 0.59 +0.5 2,928,885 - MPMX20_02774 0.59 +0.1 2,928,937 - MPMX20_02774 0.72 -0.2 2,929,004 + MPMX20_02774 0.89 -0.0 2,929,012 - -0.4 2,929,012 - -0.0 2,929,046 + -0.2 2,929,121 + -1.8 2,929,135 - -0.1 2,929,192 + MPMX20_02775 0.14 +0.1 2,929,233 + MPMX20_02775 0.20 -0.1 2,929,270 + MPMX20_02775 0.25 -0.9 2,929,270 + MPMX20_02775 0.25 -2.0 2,929,356 - MPMX20_02775 0.36 -1.2 2,929,504 + MPMX20_02775 0.56 -1.0 2,929,512 - MPMX20_02775 0.57 -1.2 2,929,512 - MPMX20_02775 0.57 -0.3 2,929,743 - MPMX20_02775 0.88 -1.6 2,929,748 - MPMX20_02775 0.89 -1.4 2,929,754 - MPMX20_02775 0.90 +0.1 2,929,759 - -1.1 2,929,804 - -0.9 2,929,814 - -0.9 2,929,907 - -1.2 2,929,993 + MPMX20_02776 0.17 -2.9 2,929,993 + MPMX20_02776 0.17 -0.7 2,929,993 + MPMX20_02776 0.17 -2.1 2,930,011 - MPMX20_02776 0.19 -0.8 2,930,034 - MPMX20_02776 0.21 +0.1 2,930,093 + MPMX20_02776 0.27 -1.7 2,930,134 - MPMX20_02776 0.32 -1.1 2,930,156 - MPMX20_02776 0.34 -0.2 2,930,187 - MPMX20_02776 0.37 -1.9 2,930,187 - MPMX20_02776 0.37 -2.0 2,930,206 - MPMX20_02776 0.39 -1.7 2,930,276 + MPMX20_02776 0.46 -2.2 2,930,284 - MPMX20_02776 0.47 -1.3 2,930,296 + MPMX20_02776 0.48 +0.5 2,930,314 - MPMX20_02776 0.50 +1.1 2,930,332 + MPMX20_02776 0.52 -1.1 2,930,354 + MPMX20_02776 0.54 -0.8 2,930,373 - MPMX20_02776 0.56 -0.6 2,930,653 + MPMX20_02776 0.85 -1.1 2,930,673 - MPMX20_02776 0.87 -3.4 2,930,683 - MPMX20_02776 0.88 -1.2 2,930,745 + -3.4 2,930,745 + +1.4 2,930,753 - -1.7 2,930,775 + -1.6 2,930,783 - -0.1 2,930,815 + -1.1 2,930,815 + +0.1 2,930,823 - -0.1 2,930,845 + +0.3 2,930,847 + +0.4 2,930,875 + -0.4 2,930,875 + -0.6 2,930,875 + +0.5 2,930,875 + -2.9 2,930,875 + -0.5 2,930,875 + +0.2 2,930,875 + +0.0 2,930,883 - +1.3 2,930,883 - -1.2 2,930,883 - -0.4 2,930,883 - +0.1 2,930,883 - +0.8 2,930,883 - -0.2 2,930,883 - +0.7 2,930,883 - -0.4 2,930,883 - +0.2 2,930,884 - +1.4 2,930,884 - -1.3 2,930,946 - -1.0 2,931,033 + -3.0 2,931,042 - +0.3 2,931,044 - +0.2 2,931,144 + MPMX20_02777 0.22 -0.4 2,931,155 - MPMX20_02777 0.23 -0.2 2,931,155 - MPMX20_02777 0.23 +0.5 2,931,192 + MPMX20_02777 0.28 -1.2 2,931,192 + MPMX20_02777 0.28 -1.6 2,931,259 + MPMX20_02777 0.37 -0.6 2,931,274 + MPMX20_02777 0.39 +1.0 2,931,292 - MPMX20_02777 0.42 -0.2 2,931,395 + MPMX20_02777 0.55 -0.4 2,931,476 + MPMX20_02777 0.66 -0.0 2,931,648 + MPMX20_02777 0.89 -0.5 2,931,662 + +1.0 2,931,691 + -1.6 2,931,698 - -0.2 2,931,771 + -1.1 2,931,771 + -0.2 2,931,771 + -0.7 2,931,771 + -0.7 2,931,788 + -0.8
Or see this region's nucleotide sequence