Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02327 and MPMX20_02328 are separated by 16 nucleotides MPMX20_02328 and MPMX20_02329 overlap by 4 nucleotides
MPMX20_02327: MPMX20_02327 - Glycogen operon protein GlgX, at 2,449,074 to 2,451,149
_02327
MPMX20_02328: MPMX20_02328 - Maltooligosyl trehalose synthase, at 2,451,166 to 2,453,634
_02328
MPMX20_02329: MPMX20_02329 - 1,4-alpha-glucan branching enzyme GlgB, at 2,453,631 to 2,455,418
_02329
Position (kb)
2451
2452
2453
2454 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2450.244 kb on - strand, within MPMX20_02327 at 2450.282 kb on + strand, within MPMX20_02327 at 2450.290 kb on - strand, within MPMX20_02327 at 2450.290 kb on - strand, within MPMX20_02327 at 2450.303 kb on + strand, within MPMX20_02327 at 2450.316 kb on + strand, within MPMX20_02327 at 2450.324 kb on - strand, within MPMX20_02327 at 2450.324 kb on - strand, within MPMX20_02327 at 2450.324 kb on - strand, within MPMX20_02327 at 2450.327 kb on + strand, within MPMX20_02327 at 2450.335 kb on - strand, within MPMX20_02327 at 2450.340 kb on + strand, within MPMX20_02327 at 2450.347 kb on - strand, within MPMX20_02327 at 2450.370 kb on - strand, within MPMX20_02327 at 2450.391 kb on - strand, within MPMX20_02327 at 2450.391 kb on - strand, within MPMX20_02327 at 2450.477 kb on + strand, within MPMX20_02327 at 2450.477 kb on + strand, within MPMX20_02327 at 2450.477 kb on + strand, within MPMX20_02327 at 2450.477 kb on + strand, within MPMX20_02327 at 2450.485 kb on - strand, within MPMX20_02327 at 2450.550 kb on + strand, within MPMX20_02327 at 2450.550 kb on + strand, within MPMX20_02327 at 2450.599 kb on - strand, within MPMX20_02327 at 2450.618 kb on + strand, within MPMX20_02327 at 2450.618 kb on + strand, within MPMX20_02327 at 2450.618 kb on + strand, within MPMX20_02327 at 2450.618 kb on + strand, within MPMX20_02327 at 2450.626 kb on + strand, within MPMX20_02327 at 2450.626 kb on - strand, within MPMX20_02327 at 2450.626 kb on - strand, within MPMX20_02327 at 2450.633 kb on - strand, within MPMX20_02327 at 2450.640 kb on + strand, within MPMX20_02327 at 2450.648 kb on - strand, within MPMX20_02327 at 2450.672 kb on - strand, within MPMX20_02327 at 2450.707 kb on + strand, within MPMX20_02327 at 2450.781 kb on + strand, within MPMX20_02327 at 2450.839 kb on - strand, within MPMX20_02327 at 2450.924 kb on - strand, within MPMX20_02327 at 2450.955 kb on + strand at 2451.031 kb on + strand at 2451.031 kb on + strand at 2451.040 kb on - strand at 2451.060 kb on - strand at 2451.060 kb on - strand at 2451.060 kb on - strand at 2451.107 kb on + strand at 2451.107 kb on + strand at 2451.141 kb on - strand at 2451.186 kb on + strand at 2451.186 kb on + strand at 2451.201 kb on + strand at 2451.217 kb on - strand at 2451.245 kb on + strand at 2451.246 kb on - strand at 2451.307 kb on + strand at 2451.318 kb on + strand at 2451.449 kb on + strand, within MPMX20_02328 at 2451.459 kb on + strand, within MPMX20_02328 at 2451.467 kb on - strand, within MPMX20_02328 at 2451.481 kb on + strand, within MPMX20_02328 at 2451.515 kb on - strand, within MPMX20_02328 at 2451.527 kb on - strand, within MPMX20_02328 at 2451.624 kb on + strand, within MPMX20_02328 at 2451.632 kb on - strand, within MPMX20_02328 at 2451.641 kb on + strand, within MPMX20_02328 at 2451.641 kb on + strand, within MPMX20_02328 at 2451.644 kb on - strand, within MPMX20_02328 at 2451.696 kb on + strand, within MPMX20_02328 at 2451.704 kb on - strand, within MPMX20_02328 at 2451.735 kb on + strand, within MPMX20_02328 at 2451.794 kb on - strand, within MPMX20_02328 at 2451.799 kb on + strand, within MPMX20_02328 at 2451.807 kb on - strand, within MPMX20_02328 at 2451.807 kb on - strand, within MPMX20_02328 at 2451.807 kb on - strand, within MPMX20_02328 at 2451.807 kb on - strand, within MPMX20_02328 at 2451.807 kb on - strand, within MPMX20_02328 at 2451.814 kb on + strand, within MPMX20_02328 at 2451.831 kb on + strand, within MPMX20_02328 at 2451.939 kb on + strand, within MPMX20_02328 at 2452.004 kb on - strand, within MPMX20_02328 at 2452.079 kb on - strand, within MPMX20_02328 at 2452.089 kb on + strand, within MPMX20_02328 at 2452.089 kb on + strand, within MPMX20_02328 at 2452.097 kb on - strand, within MPMX20_02328 at 2452.099 kb on - strand, within MPMX20_02328 at 2452.099 kb on - strand, within MPMX20_02328 at 2452.099 kb on - strand, within MPMX20_02328 at 2452.235 kb on - strand, within MPMX20_02328 at 2452.254 kb on + strand, within MPMX20_02328 at 2452.286 kb on - strand, within MPMX20_02328 at 2452.406 kb on - strand, within MPMX20_02328 at 2452.410 kb on + strand, within MPMX20_02328 at 2452.410 kb on + strand, within MPMX20_02328 at 2452.410 kb on + strand, within MPMX20_02328 at 2452.418 kb on - strand, within MPMX20_02328 at 2452.418 kb on - strand, within MPMX20_02328 at 2452.455 kb on + strand, within MPMX20_02328 at 2452.455 kb on + strand, within MPMX20_02328 at 2452.463 kb on - strand, within MPMX20_02328 at 2452.589 kb on + strand, within MPMX20_02328 at 2452.639 kb on - strand, within MPMX20_02328 at 2452.641 kb on - strand, within MPMX20_02328 at 2452.646 kb on - strand, within MPMX20_02328 at 2452.722 kb on - strand, within MPMX20_02328 at 2452.723 kb on + strand, within MPMX20_02328 at 2452.812 kb on - strand, within MPMX20_02328 at 2452.882 kb on + strand, within MPMX20_02328 at 2452.950 kb on + strand, within MPMX20_02328 at 2452.950 kb on + strand, within MPMX20_02328 at 2452.950 kb on + strand, within MPMX20_02328 at 2452.968 kb on + strand, within MPMX20_02328 at 2452.976 kb on - strand, within MPMX20_02328 at 2452.991 kb on + strand, within MPMX20_02328 at 2453.008 kb on + strand, within MPMX20_02328 at 2453.076 kb on + strand, within MPMX20_02328 at 2453.129 kb on + strand, within MPMX20_02328 at 2453.159 kb on + strand, within MPMX20_02328 at 2453.159 kb on + strand, within MPMX20_02328 at 2453.167 kb on - strand, within MPMX20_02328 at 2453.167 kb on - strand, within MPMX20_02328 at 2453.229 kb on + strand, within MPMX20_02328 at 2453.265 kb on + strand, within MPMX20_02328 at 2453.265 kb on + strand, within MPMX20_02328 at 2453.411 kb on - strand at 2453.425 kb on + strand at 2453.478 kb on + strand at 2453.478 kb on + strand at 2453.478 kb on + strand at 2453.478 kb on + strand at 2453.478 kb on + strand at 2453.478 kb on + strand at 2453.478 kb on + strand at 2453.478 kb on + strand at 2453.485 kb on + strand at 2453.486 kb on - strand at 2453.486 kb on - strand at 2453.486 kb on - strand at 2453.486 kb on - strand at 2453.486 kb on - strand at 2453.486 kb on - strand at 2453.490 kb on + strand at 2453.524 kb on + strand at 2453.525 kb on + strand at 2453.581 kb on + strand at 2453.604 kb on + strand at 2453.607 kb on + strand at 2453.663 kb on + strand at 2453.665 kb on + strand at 2453.678 kb on + strand at 2453.696 kb on + strand at 2453.704 kb on - strand at 2453.704 kb on - strand at 2453.704 kb on - strand at 2453.706 kb on + strand at 2453.719 kb on + strand at 2453.738 kb on + strand at 2453.744 kb on - strand at 2453.802 kb on - strand at 2453.804 kb on + strand at 2453.835 kb on - strand, within MPMX20_02329 at 2453.841 kb on - strand, within MPMX20_02329 at 2453.848 kb on - strand, within MPMX20_02329 at 2453.900 kb on - strand, within MPMX20_02329 at 2453.938 kb on + strand, within MPMX20_02329 at 2454.058 kb on + strand, within MPMX20_02329 at 2454.058 kb on + strand, within MPMX20_02329 at 2454.058 kb on + strand, within MPMX20_02329 at 2454.066 kb on - strand, within MPMX20_02329 at 2454.194 kb on + strand, within MPMX20_02329 at 2454.221 kb on - strand, within MPMX20_02329 at 2454.298 kb on - strand, within MPMX20_02329 at 2454.298 kb on - strand, within MPMX20_02329 at 2454.347 kb on - strand, within MPMX20_02329 at 2454.380 kb on + strand, within MPMX20_02329 at 2454.464 kb on - strand, within MPMX20_02329 at 2454.479 kb on + strand, within MPMX20_02329 at 2454.526 kb on - strand, within MPMX20_02329 at 2454.530 kb on + strand, within MPMX20_02329 at 2454.568 kb on - strand, within MPMX20_02329 at 2454.608 kb on - strand, within MPMX20_02329 at 2454.616 kb on + strand, within MPMX20_02329 at 2454.624 kb on - strand, within MPMX20_02329 at 2454.626 kb on + strand, within MPMX20_02329
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 2,450,244 - MPMX20_02327 0.56 -0.4 2,450,282 + MPMX20_02327 0.58 -0.4 2,450,290 - MPMX20_02327 0.59 +1.3 2,450,290 - MPMX20_02327 0.59 -0.9 2,450,303 + MPMX20_02327 0.59 -1.0 2,450,316 + MPMX20_02327 0.60 -0.5 2,450,324 - MPMX20_02327 0.60 -0.9 2,450,324 - MPMX20_02327 0.60 +0.3 2,450,324 - MPMX20_02327 0.60 -0.2 2,450,327 + MPMX20_02327 0.60 +1.5 2,450,335 - MPMX20_02327 0.61 -0.7 2,450,340 + MPMX20_02327 0.61 +0.1 2,450,347 - MPMX20_02327 0.61 -0.8 2,450,370 - MPMX20_02327 0.62 -1.8 2,450,391 - MPMX20_02327 0.63 -2.7 2,450,391 - MPMX20_02327 0.63 -0.8 2,450,477 + MPMX20_02327 0.68 -0.1 2,450,477 + MPMX20_02327 0.68 -0.8 2,450,477 + MPMX20_02327 0.68 +0.2 2,450,477 + MPMX20_02327 0.68 +0.2 2,450,485 - MPMX20_02327 0.68 -0.1 2,450,550 + MPMX20_02327 0.71 +0.7 2,450,550 + MPMX20_02327 0.71 -0.8 2,450,599 - MPMX20_02327 0.73 +0.3 2,450,618 + MPMX20_02327 0.74 -0.8 2,450,618 + MPMX20_02327 0.74 -0.2 2,450,618 + MPMX20_02327 0.74 +1.1 2,450,618 + MPMX20_02327 0.74 +0.1 2,450,626 + MPMX20_02327 0.75 +1.1 2,450,626 - MPMX20_02327 0.75 -0.2 2,450,626 - MPMX20_02327 0.75 +0.3 2,450,633 - MPMX20_02327 0.75 +1.6 2,450,640 + MPMX20_02327 0.75 +0.2 2,450,648 - MPMX20_02327 0.76 +0.6 2,450,672 - MPMX20_02327 0.77 +0.7 2,450,707 + MPMX20_02327 0.79 -0.4 2,450,781 + MPMX20_02327 0.82 +0.4 2,450,839 - MPMX20_02327 0.85 +2.0 2,450,924 - MPMX20_02327 0.89 -1.3 2,450,955 + +0.6 2,451,031 + +0.0 2,451,031 + +0.1 2,451,040 - +0.2 2,451,060 - +0.3 2,451,060 - -0.2 2,451,060 - +0.3 2,451,107 + +0.7 2,451,107 + +0.3 2,451,141 - -1.7 2,451,186 + +0.1 2,451,186 + -0.1 2,451,201 + +0.4 2,451,217 - -1.1 2,451,245 + +0.6 2,451,246 - -0.2 2,451,307 + +1.0 2,451,318 + +1.1 2,451,449 + MPMX20_02328 0.11 +0.8 2,451,459 + MPMX20_02328 0.12 +0.2 2,451,467 - MPMX20_02328 0.12 -0.3 2,451,481 + MPMX20_02328 0.13 -0.1 2,451,515 - MPMX20_02328 0.14 +1.1 2,451,527 - MPMX20_02328 0.15 -0.7 2,451,624 + MPMX20_02328 0.19 +0.1 2,451,632 - MPMX20_02328 0.19 +0.5 2,451,641 + MPMX20_02328 0.19 +0.5 2,451,641 + MPMX20_02328 0.19 -0.9 2,451,644 - MPMX20_02328 0.19 +2.0 2,451,696 + MPMX20_02328 0.21 +0.1 2,451,704 - MPMX20_02328 0.22 -0.4 2,451,735 + MPMX20_02328 0.23 +0.5 2,451,794 - MPMX20_02328 0.25 -0.9 2,451,799 + MPMX20_02328 0.26 +1.7 2,451,807 - MPMX20_02328 0.26 +0.0 2,451,807 - MPMX20_02328 0.26 +0.2 2,451,807 - MPMX20_02328 0.26 +0.3 2,451,807 - MPMX20_02328 0.26 -1.1 2,451,807 - MPMX20_02328 0.26 +0.1 2,451,814 + MPMX20_02328 0.26 +0.5 2,451,831 + MPMX20_02328 0.27 -0.2 2,451,939 + MPMX20_02328 0.31 +0.5 2,452,004 - MPMX20_02328 0.34 +0.8 2,452,079 - MPMX20_02328 0.37 +0.9 2,452,089 + MPMX20_02328 0.37 -0.1 2,452,089 + MPMX20_02328 0.37 +1.4 2,452,097 - MPMX20_02328 0.38 +0.0 2,452,099 - MPMX20_02328 0.38 +0.2 2,452,099 - MPMX20_02328 0.38 +0.4 2,452,099 - MPMX20_02328 0.38 +0.7 2,452,235 - MPMX20_02328 0.43 +0.3 2,452,254 + MPMX20_02328 0.44 +0.3 2,452,286 - MPMX20_02328 0.45 -0.8 2,452,406 - MPMX20_02328 0.50 +0.1 2,452,410 + MPMX20_02328 0.50 -0.2 2,452,410 + MPMX20_02328 0.50 +0.9 2,452,410 + MPMX20_02328 0.50 -1.2 2,452,418 - MPMX20_02328 0.51 +0.2 2,452,418 - MPMX20_02328 0.51 +0.7 2,452,455 + MPMX20_02328 0.52 +0.4 2,452,455 + MPMX20_02328 0.52 +1.3 2,452,463 - MPMX20_02328 0.53 -0.1 2,452,589 + MPMX20_02328 0.58 +1.0 2,452,639 - MPMX20_02328 0.60 +1.3 2,452,641 - MPMX20_02328 0.60 -0.3 2,452,646 - MPMX20_02328 0.60 -0.0 2,452,722 - MPMX20_02328 0.63 +0.1 2,452,723 + MPMX20_02328 0.63 -0.5 2,452,812 - MPMX20_02328 0.67 +0.2 2,452,882 + MPMX20_02328 0.70 -1.3 2,452,950 + MPMX20_02328 0.72 -0.6 2,452,950 + MPMX20_02328 0.72 +0.5 2,452,950 + MPMX20_02328 0.72 +1.4 2,452,968 + MPMX20_02328 0.73 +0.1 2,452,976 - MPMX20_02328 0.73 +0.9 2,452,991 + MPMX20_02328 0.74 -0.2 2,453,008 + MPMX20_02328 0.75 -0.7 2,453,076 + MPMX20_02328 0.77 +0.2 2,453,129 + MPMX20_02328 0.80 +0.7 2,453,159 + MPMX20_02328 0.81 -3.8 2,453,159 + MPMX20_02328 0.81 +0.8 2,453,167 - MPMX20_02328 0.81 +2.6 2,453,167 - MPMX20_02328 0.81 -0.4 2,453,229 + MPMX20_02328 0.84 +0.1 2,453,265 + MPMX20_02328 0.85 +0.3 2,453,265 + MPMX20_02328 0.85 -2.1 2,453,411 - +0.8 2,453,425 + +1.8 2,453,478 + -0.3 2,453,478 + +0.7 2,453,478 + -2.3 2,453,478 + -0.9 2,453,478 + -0.1 2,453,478 + +0.1 2,453,478 + -0.2 2,453,478 + -0.5 2,453,485 + +0.3 2,453,486 - -0.6 2,453,486 - -0.4 2,453,486 - -0.3 2,453,486 - +0.7 2,453,486 - -0.2 2,453,486 - -0.9 2,453,490 + +0.6 2,453,524 + +0.1 2,453,525 + +0.7 2,453,581 + -1.2 2,453,604 + +0.7 2,453,607 + +0.3 2,453,663 + +0.4 2,453,665 + -0.5 2,453,678 + -0.1 2,453,696 + -1.1 2,453,704 - +0.8 2,453,704 - -0.1 2,453,704 - +1.4 2,453,706 + +2.0 2,453,719 + +0.1 2,453,738 + -0.1 2,453,744 - -0.5 2,453,802 - +0.8 2,453,804 + -1.5 2,453,835 - MPMX20_02329 0.11 +0.5 2,453,841 - MPMX20_02329 0.12 +0.2 2,453,848 - MPMX20_02329 0.12 +0.5 2,453,900 - MPMX20_02329 0.15 +0.5 2,453,938 + MPMX20_02329 0.17 +0.3 2,454,058 + MPMX20_02329 0.24 +1.1 2,454,058 + MPMX20_02329 0.24 -0.4 2,454,058 + MPMX20_02329 0.24 -0.5 2,454,066 - MPMX20_02329 0.24 +0.0 2,454,194 + MPMX20_02329 0.31 +1.2 2,454,221 - MPMX20_02329 0.33 -0.6 2,454,298 - MPMX20_02329 0.37 -0.8 2,454,298 - MPMX20_02329 0.37 +0.0 2,454,347 - MPMX20_02329 0.40 +0.1 2,454,380 + MPMX20_02329 0.42 -0.5 2,454,464 - MPMX20_02329 0.47 +0.3 2,454,479 + MPMX20_02329 0.47 +0.4 2,454,526 - MPMX20_02329 0.50 -0.6 2,454,530 + MPMX20_02329 0.50 -0.3 2,454,568 - MPMX20_02329 0.52 -0.4 2,454,608 - MPMX20_02329 0.55 -0.8 2,454,616 + MPMX20_02329 0.55 +0.3 2,454,624 - MPMX20_02329 0.56 +0.2 2,454,626 + MPMX20_02329 0.56 -0.6
Or see this region's nucleotide sequence