Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01105

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01104 and MPMX20_01105 are separated by 84 nucleotidesMPMX20_01105 and MPMX20_01106 are separated by 219 nucleotidesMPMX20_01106 and MPMX20_01107 are separated by 1 nucleotides MPMX20_01104: MPMX20_01104 - Maltose regulon regulatory protein MalI, at 1,163,296 to 1,164,312 _01104 MPMX20_01105: MPMX20_01105 - PTS system glucose-specific EIICBA component, at 1,164,397 to 1,165,896 _01105 MPMX20_01106: MPMX20_01106 - putative protein YbcJ, at 1,166,116 to 1,166,328 _01106 MPMX20_01107: MPMX20_01107 - Bifunctional protein FolD protein, at 1,166,330 to 1,167,196 _01107 Position (kb) 1164 1165 1166Strain fitness (log2 ratio) -2 -1 0 1 2at 1163.414 kb on - strand, within MPMX20_01104at 1163.466 kb on + strand, within MPMX20_01104at 1163.474 kb on - strand, within MPMX20_01104at 1163.479 kb on - strand, within MPMX20_01104at 1163.573 kb on + strand, within MPMX20_01104at 1163.591 kb on - strand, within MPMX20_01104at 1163.679 kb on + strand, within MPMX20_01104at 1163.763 kb on + strand, within MPMX20_01104at 1163.776 kb on - strand, within MPMX20_01104at 1163.795 kb on - strand, within MPMX20_01104at 1163.992 kb on + strand, within MPMX20_01104at 1164.032 kb on + strand, within MPMX20_01104at 1164.065 kb on - strand, within MPMX20_01104at 1164.079 kb on - strand, within MPMX20_01104at 1164.111 kb on + strand, within MPMX20_01104at 1164.111 kb on + strand, within MPMX20_01104at 1164.119 kb on - strand, within MPMX20_01104at 1164.119 kb on - strand, within MPMX20_01104at 1164.126 kb on + strand, within MPMX20_01104at 1164.134 kb on - strand, within MPMX20_01104at 1164.153 kb on - strand, within MPMX20_01104at 1164.170 kb on + strand, within MPMX20_01104at 1164.175 kb on + strand, within MPMX20_01104at 1164.183 kb on - strand, within MPMX20_01104at 1164.183 kb on - strand, within MPMX20_01104at 1164.251 kb on - strandat 1164.251 kb on - strandat 1164.252 kb on + strandat 1164.264 kb on + strandat 1164.355 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.370 kb on + strandat 1164.373 kb on - strandat 1164.373 kb on - strandat 1164.373 kb on - strandat 1164.428 kb on + strandat 1164.429 kb on - strandat 1164.498 kb on + strandat 1164.498 kb on + strandat 1164.512 kb on + strandat 1164.599 kb on + strand, within MPMX20_01105at 1164.617 kb on - strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.730 kb on + strand, within MPMX20_01105at 1164.794 kb on - strand, within MPMX20_01105at 1164.823 kb on + strand, within MPMX20_01105at 1164.831 kb on - strand, within MPMX20_01105at 1164.918 kb on + strand, within MPMX20_01105at 1164.918 kb on + strand, within MPMX20_01105at 1164.918 kb on + strand, within MPMX20_01105at 1164.926 kb on - strand, within MPMX20_01105at 1164.926 kb on - strand, within MPMX20_01105at 1164.926 kb on - strand, within MPMX20_01105at 1164.962 kb on - strand, within MPMX20_01105at 1164.979 kb on + strand, within MPMX20_01105at 1164.980 kb on - strand, within MPMX20_01105at 1164.987 kb on - strand, within MPMX20_01105at 1165.105 kb on - strand, within MPMX20_01105at 1165.182 kb on - strand, within MPMX20_01105at 1165.219 kb on - strand, within MPMX20_01105at 1165.219 kb on - strand, within MPMX20_01105at 1165.244 kb on + strand, within MPMX20_01105at 1165.262 kb on - strand, within MPMX20_01105at 1165.275 kb on + strand, within MPMX20_01105at 1165.280 kb on + strand, within MPMX20_01105at 1165.280 kb on + strand, within MPMX20_01105at 1165.288 kb on - strand, within MPMX20_01105at 1165.303 kb on + strand, within MPMX20_01105at 1165.390 kb on - strand, within MPMX20_01105at 1165.478 kb on - strand, within MPMX20_01105at 1165.609 kb on + strand, within MPMX20_01105at 1165.617 kb on - strand, within MPMX20_01105at 1165.700 kb on - strand, within MPMX20_01105at 1165.701 kb on - strand, within MPMX20_01105at 1165.737 kb on + strand, within MPMX20_01105at 1165.777 kb on - strandat 1165.887 kb on - strandat 1165.893 kb on - strandat 1165.893 kb on - strandat 1166.070 kb on - strandat 1166.076 kb on - strandat 1166.121 kb on - strandat 1166.188 kb on + strand, within MPMX20_01106at 1166.196 kb on - strand, within MPMX20_01106at 1166.201 kb on + strand, within MPMX20_01106at 1166.201 kb on - strand, within MPMX20_01106at 1166.209 kb on - strand, within MPMX20_01106at 1166.234 kb on + strand, within MPMX20_01106at 1166.297 kb on - strand, within MPMX20_01106at 1166.328 kb on + strandat 1166.346 kb on - strandat 1166.348 kb on + strandat 1166.354 kb on - strandat 1166.364 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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1,163,414 - MPMX20_01104 0.12 -1.7
1,163,466 + MPMX20_01104 0.17 -0.9
1,163,474 - MPMX20_01104 0.18 -1.2
1,163,479 - MPMX20_01104 0.18 +0.3
1,163,573 + MPMX20_01104 0.27 -2.6
1,163,591 - MPMX20_01104 0.29 -0.6
1,163,679 + MPMX20_01104 0.38 -2.4
1,163,763 + MPMX20_01104 0.46 +0.1
1,163,776 - MPMX20_01104 0.47 +0.2
1,163,795 - MPMX20_01104 0.49 +0.8
1,163,992 + MPMX20_01104 0.68 -1.2
1,164,032 + MPMX20_01104 0.72 -1.0
1,164,065 - MPMX20_01104 0.76 -1.8
1,164,079 - MPMX20_01104 0.77 +0.6
1,164,111 + MPMX20_01104 0.80 -0.6
1,164,111 + MPMX20_01104 0.80 +2.0
1,164,119 - MPMX20_01104 0.81 +0.2
1,164,119 - MPMX20_01104 0.81 -0.9
1,164,126 + MPMX20_01104 0.82 -0.4
1,164,134 - MPMX20_01104 0.82 -0.6
1,164,153 - MPMX20_01104 0.84 +0.3
1,164,170 + MPMX20_01104 0.86 +2.0
1,164,175 + MPMX20_01104 0.86 -0.7
1,164,183 - MPMX20_01104 0.87 -0.7
1,164,183 - MPMX20_01104 0.87 -0.2
1,164,251 - -0.6
1,164,251 - -1.2
1,164,252 + +1.2
1,164,264 + -2.0
1,164,355 + +0.5
1,164,365 + +0.4
1,164,365 + +0.8
1,164,365 + -0.6
1,164,365 + +0.9
1,164,365 + +0.2
1,164,365 + -0.8
1,164,365 + -0.7
1,164,370 + +0.4
1,164,373 - +0.9
1,164,373 - +0.3
1,164,373 - -0.0
1,164,428 + +1.1
1,164,429 - -0.6
1,164,498 + -0.4
1,164,498 + -0.4
1,164,512 + +0.4
1,164,599 + MPMX20_01105 0.13 +0.7
1,164,617 - MPMX20_01105 0.15 -1.0
1,164,666 + MPMX20_01105 0.18 +0.9
1,164,666 + MPMX20_01105 0.18 -0.3
1,164,666 + MPMX20_01105 0.18 -0.6
1,164,666 + MPMX20_01105 0.18 +1.8
1,164,666 + MPMX20_01105 0.18 +0.2
1,164,666 + MPMX20_01105 0.18 -0.4
1,164,674 - MPMX20_01105 0.18 +0.1
1,164,674 - MPMX20_01105 0.18 +1.3
1,164,674 - MPMX20_01105 0.18 -0.1
1,164,674 - MPMX20_01105 0.18 +0.4
1,164,730 + MPMX20_01105 0.22 -1.3
1,164,794 - MPMX20_01105 0.26 -1.5
1,164,823 + MPMX20_01105 0.28 -0.7
1,164,831 - MPMX20_01105 0.29 -0.4
1,164,918 + MPMX20_01105 0.35 -1.3
1,164,918 + MPMX20_01105 0.35 +0.2
1,164,918 + MPMX20_01105 0.35 -0.0
1,164,926 - MPMX20_01105 0.35 +0.4
1,164,926 - MPMX20_01105 0.35 -0.1
1,164,926 - MPMX20_01105 0.35 -0.8
1,164,962 - MPMX20_01105 0.38 +1.7
1,164,979 + MPMX20_01105 0.39 +0.8
1,164,980 - MPMX20_01105 0.39 -0.1
1,164,987 - MPMX20_01105 0.39 +1.3
1,165,105 - MPMX20_01105 0.47 -1.1
1,165,182 - MPMX20_01105 0.52 +0.1
1,165,219 - MPMX20_01105 0.55 -0.2
1,165,219 - MPMX20_01105 0.55 +0.7
1,165,244 + MPMX20_01105 0.56 -0.1
1,165,262 - MPMX20_01105 0.58 -0.9
1,165,275 + MPMX20_01105 0.59 -2.7
1,165,280 + MPMX20_01105 0.59 +0.7
1,165,280 + MPMX20_01105 0.59 +0.7
1,165,288 - MPMX20_01105 0.59 -0.2
1,165,303 + MPMX20_01105 0.60 +1.4
1,165,390 - MPMX20_01105 0.66 +0.3
1,165,478 - MPMX20_01105 0.72 -0.6
1,165,609 + MPMX20_01105 0.81 -0.1
1,165,617 - MPMX20_01105 0.81 +0.5
1,165,700 - MPMX20_01105 0.87 -0.0
1,165,701 - MPMX20_01105 0.87 -0.5
1,165,737 + MPMX20_01105 0.89 -0.8
1,165,777 - +0.3
1,165,887 - +0.6
1,165,893 - -1.3
1,165,893 - -0.9
1,166,070 - +0.3
1,166,076 - -0.1
1,166,121 - +0.9
1,166,188 + MPMX20_01106 0.34 +0.3
1,166,196 - MPMX20_01106 0.38 +0.4
1,166,201 + MPMX20_01106 0.40 -2.1
1,166,201 - MPMX20_01106 0.40 +1.0
1,166,209 - MPMX20_01106 0.44 +0.6
1,166,234 + MPMX20_01106 0.55 -0.0
1,166,297 - MPMX20_01106 0.85 +0.6
1,166,328 + +0.4
1,166,346 - +0.2
1,166,348 + -1.9
1,166,354 - -0.2
1,166,364 - +1.1

Or see this region's nucleotide sequence