Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01104 and MPMX20_01105 are separated by 84 nucleotides MPMX20_01105 and MPMX20_01106 are separated by 219 nucleotides MPMX20_01106 and MPMX20_01107 are separated by 1 nucleotides
MPMX20_01104: MPMX20_01104 - Maltose regulon regulatory protein MalI, at 1,163,296 to 1,164,312
_01104
MPMX20_01105: MPMX20_01105 - PTS system glucose-specific EIICBA component, at 1,164,397 to 1,165,896
_01105
MPMX20_01106: MPMX20_01106 - putative protein YbcJ, at 1,166,116 to 1,166,328
_01106
MPMX20_01107: MPMX20_01107 - Bifunctional protein FolD protein, at 1,166,330 to 1,167,196
_01107
Position (kb)
1164
1165
1166 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1163.414 kb on - strand, within MPMX20_01104 at 1163.466 kb on + strand, within MPMX20_01104 at 1163.474 kb on - strand, within MPMX20_01104 at 1163.479 kb on - strand, within MPMX20_01104 at 1163.573 kb on + strand, within MPMX20_01104 at 1163.591 kb on - strand, within MPMX20_01104 at 1163.679 kb on + strand, within MPMX20_01104 at 1163.763 kb on + strand, within MPMX20_01104 at 1163.776 kb on - strand, within MPMX20_01104 at 1163.795 kb on - strand, within MPMX20_01104 at 1163.992 kb on + strand, within MPMX20_01104 at 1164.032 kb on + strand, within MPMX20_01104 at 1164.065 kb on - strand, within MPMX20_01104 at 1164.079 kb on - strand, within MPMX20_01104 at 1164.111 kb on + strand, within MPMX20_01104 at 1164.111 kb on + strand, within MPMX20_01104 at 1164.119 kb on - strand, within MPMX20_01104 at 1164.119 kb on - strand, within MPMX20_01104 at 1164.126 kb on + strand, within MPMX20_01104 at 1164.134 kb on - strand, within MPMX20_01104 at 1164.153 kb on - strand, within MPMX20_01104 at 1164.170 kb on + strand, within MPMX20_01104 at 1164.175 kb on + strand, within MPMX20_01104 at 1164.183 kb on - strand, within MPMX20_01104 at 1164.183 kb on - strand, within MPMX20_01104 at 1164.251 kb on - strand at 1164.251 kb on - strand at 1164.252 kb on + strand at 1164.264 kb on + strand at 1164.355 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.370 kb on + strand at 1164.373 kb on - strand at 1164.373 kb on - strand at 1164.373 kb on - strand at 1164.428 kb on + strand at 1164.429 kb on - strand at 1164.498 kb on + strand at 1164.498 kb on + strand at 1164.512 kb on + strand at 1164.599 kb on + strand, within MPMX20_01105 at 1164.617 kb on - strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.730 kb on + strand, within MPMX20_01105 at 1164.794 kb on - strand, within MPMX20_01105 at 1164.823 kb on + strand, within MPMX20_01105 at 1164.831 kb on - strand, within MPMX20_01105 at 1164.918 kb on + strand, within MPMX20_01105 at 1164.918 kb on + strand, within MPMX20_01105 at 1164.918 kb on + strand, within MPMX20_01105 at 1164.926 kb on - strand, within MPMX20_01105 at 1164.926 kb on - strand, within MPMX20_01105 at 1164.926 kb on - strand, within MPMX20_01105 at 1164.962 kb on - strand, within MPMX20_01105 at 1164.979 kb on + strand, within MPMX20_01105 at 1164.980 kb on - strand, within MPMX20_01105 at 1164.987 kb on - strand, within MPMX20_01105 at 1165.105 kb on - strand, within MPMX20_01105 at 1165.182 kb on - strand, within MPMX20_01105 at 1165.219 kb on - strand, within MPMX20_01105 at 1165.219 kb on - strand, within MPMX20_01105 at 1165.244 kb on + strand, within MPMX20_01105 at 1165.262 kb on - strand, within MPMX20_01105 at 1165.275 kb on + strand, within MPMX20_01105 at 1165.280 kb on + strand, within MPMX20_01105 at 1165.280 kb on + strand, within MPMX20_01105 at 1165.288 kb on - strand, within MPMX20_01105 at 1165.303 kb on + strand, within MPMX20_01105 at 1165.390 kb on - strand, within MPMX20_01105 at 1165.478 kb on - strand, within MPMX20_01105 at 1165.609 kb on + strand, within MPMX20_01105 at 1165.617 kb on - strand, within MPMX20_01105 at 1165.700 kb on - strand, within MPMX20_01105 at 1165.701 kb on - strand, within MPMX20_01105 at 1165.737 kb on + strand, within MPMX20_01105 at 1165.777 kb on - strand at 1165.887 kb on - strand at 1165.893 kb on - strand at 1165.893 kb on - strand at 1166.070 kb on - strand at 1166.076 kb on - strand at 1166.121 kb on - strand at 1166.188 kb on + strand, within MPMX20_01106 at 1166.196 kb on - strand, within MPMX20_01106 at 1166.201 kb on + strand, within MPMX20_01106 at 1166.201 kb on - strand, within MPMX20_01106 at 1166.209 kb on - strand, within MPMX20_01106 at 1166.234 kb on + strand, within MPMX20_01106 at 1166.297 kb on - strand, within MPMX20_01106 at 1166.328 kb on + strand at 1166.346 kb on - strand at 1166.348 kb on + strand at 1166.354 kb on - strand at 1166.364 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 1,163,414 - MPMX20_01104 0.12 -1.7 1,163,466 + MPMX20_01104 0.17 -0.9 1,163,474 - MPMX20_01104 0.18 -1.2 1,163,479 - MPMX20_01104 0.18 +0.3 1,163,573 + MPMX20_01104 0.27 -2.6 1,163,591 - MPMX20_01104 0.29 -0.6 1,163,679 + MPMX20_01104 0.38 -2.4 1,163,763 + MPMX20_01104 0.46 +0.1 1,163,776 - MPMX20_01104 0.47 +0.2 1,163,795 - MPMX20_01104 0.49 +0.8 1,163,992 + MPMX20_01104 0.68 -1.2 1,164,032 + MPMX20_01104 0.72 -1.0 1,164,065 - MPMX20_01104 0.76 -1.8 1,164,079 - MPMX20_01104 0.77 +0.6 1,164,111 + MPMX20_01104 0.80 -0.6 1,164,111 + MPMX20_01104 0.80 +2.0 1,164,119 - MPMX20_01104 0.81 +0.2 1,164,119 - MPMX20_01104 0.81 -0.9 1,164,126 + MPMX20_01104 0.82 -0.4 1,164,134 - MPMX20_01104 0.82 -0.6 1,164,153 - MPMX20_01104 0.84 +0.3 1,164,170 + MPMX20_01104 0.86 +2.0 1,164,175 + MPMX20_01104 0.86 -0.7 1,164,183 - MPMX20_01104 0.87 -0.7 1,164,183 - MPMX20_01104 0.87 -0.2 1,164,251 - -0.6 1,164,251 - -1.2 1,164,252 + +1.2 1,164,264 + -2.0 1,164,355 + +0.5 1,164,365 + +0.4 1,164,365 + +0.8 1,164,365 + -0.6 1,164,365 + +0.9 1,164,365 + +0.2 1,164,365 + -0.8 1,164,365 + -0.7 1,164,370 + +0.4 1,164,373 - +0.9 1,164,373 - +0.3 1,164,373 - -0.0 1,164,428 + +1.1 1,164,429 - -0.6 1,164,498 + -0.4 1,164,498 + -0.4 1,164,512 + +0.4 1,164,599 + MPMX20_01105 0.13 +0.7 1,164,617 - MPMX20_01105 0.15 -1.0 1,164,666 + MPMX20_01105 0.18 +0.9 1,164,666 + MPMX20_01105 0.18 -0.3 1,164,666 + MPMX20_01105 0.18 -0.6 1,164,666 + MPMX20_01105 0.18 +1.8 1,164,666 + MPMX20_01105 0.18 +0.2 1,164,666 + MPMX20_01105 0.18 -0.4 1,164,674 - MPMX20_01105 0.18 +0.1 1,164,674 - MPMX20_01105 0.18 +1.3 1,164,674 - MPMX20_01105 0.18 -0.1 1,164,674 - MPMX20_01105 0.18 +0.4 1,164,730 + MPMX20_01105 0.22 -1.3 1,164,794 - MPMX20_01105 0.26 -1.5 1,164,823 + MPMX20_01105 0.28 -0.7 1,164,831 - MPMX20_01105 0.29 -0.4 1,164,918 + MPMX20_01105 0.35 -1.3 1,164,918 + MPMX20_01105 0.35 +0.2 1,164,918 + MPMX20_01105 0.35 -0.0 1,164,926 - MPMX20_01105 0.35 +0.4 1,164,926 - MPMX20_01105 0.35 -0.1 1,164,926 - MPMX20_01105 0.35 -0.8 1,164,962 - MPMX20_01105 0.38 +1.7 1,164,979 + MPMX20_01105 0.39 +0.8 1,164,980 - MPMX20_01105 0.39 -0.1 1,164,987 - MPMX20_01105 0.39 +1.3 1,165,105 - MPMX20_01105 0.47 -1.1 1,165,182 - MPMX20_01105 0.52 +0.1 1,165,219 - MPMX20_01105 0.55 -0.2 1,165,219 - MPMX20_01105 0.55 +0.7 1,165,244 + MPMX20_01105 0.56 -0.1 1,165,262 - MPMX20_01105 0.58 -0.9 1,165,275 + MPMX20_01105 0.59 -2.7 1,165,280 + MPMX20_01105 0.59 +0.7 1,165,280 + MPMX20_01105 0.59 +0.7 1,165,288 - MPMX20_01105 0.59 -0.2 1,165,303 + MPMX20_01105 0.60 +1.4 1,165,390 - MPMX20_01105 0.66 +0.3 1,165,478 - MPMX20_01105 0.72 -0.6 1,165,609 + MPMX20_01105 0.81 -0.1 1,165,617 - MPMX20_01105 0.81 +0.5 1,165,700 - MPMX20_01105 0.87 -0.0 1,165,701 - MPMX20_01105 0.87 -0.5 1,165,737 + MPMX20_01105 0.89 -0.8 1,165,777 - +0.3 1,165,887 - +0.6 1,165,893 - -1.3 1,165,893 - -0.9 1,166,070 - +0.3 1,166,076 - -0.1 1,166,121 - +0.9 1,166,188 + MPMX20_01106 0.34 +0.3 1,166,196 - MPMX20_01106 0.38 +0.4 1,166,201 + MPMX20_01106 0.40 -2.1 1,166,201 - MPMX20_01106 0.40 +1.0 1,166,209 - MPMX20_01106 0.44 +0.6 1,166,234 + MPMX20_01106 0.55 -0.0 1,166,297 - MPMX20_01106 0.85 +0.6 1,166,328 + +0.4 1,166,346 - +0.2 1,166,348 + -1.9 1,166,354 - -0.2 1,166,364 - +1.1
Or see this region's nucleotide sequence