Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01102 and MPMX20_01103 are separated by 78 nucleotides MPMX20_01103 and MPMX20_01104 are separated by 72 nucleotides MPMX20_01104 and MPMX20_01105 are separated by 84 nucleotides
MPMX20_01102: MPMX20_01102 - Cysteine--tRNA ligase, at 1,161,238 to 1,162,623
_01102
MPMX20_01103: MPMX20_01103 - Inner membrane protein YbcI, at 1,162,702 to 1,163,223
_01103
MPMX20_01104: MPMX20_01104 - Maltose regulon regulatory protein MalI, at 1,163,296 to 1,164,312
_01104
MPMX20_01105: MPMX20_01105 - PTS system glucose-specific EIICBA component, at 1,164,397 to 1,165,896
_01105
Position (kb)
1163
1164
1165 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1162.629 kb on - strand at 1162.644 kb on - strand at 1162.698 kb on + strand at 1162.715 kb on + strand at 1162.723 kb on - strand at 1162.728 kb on - strand at 1162.742 kb on - strand at 1162.757 kb on - strand, within MPMX20_01103 at 1162.759 kb on + strand, within MPMX20_01103 at 1162.802 kb on - strand, within MPMX20_01103 at 1162.880 kb on - strand, within MPMX20_01103 at 1162.932 kb on + strand, within MPMX20_01103 at 1162.941 kb on + strand, within MPMX20_01103 at 1162.943 kb on + strand, within MPMX20_01103 at 1162.951 kb on - strand, within MPMX20_01103 at 1162.963 kb on + strand, within MPMX20_01103 at 1162.963 kb on + strand, within MPMX20_01103 at 1162.963 kb on + strand, within MPMX20_01103 at 1162.971 kb on - strand, within MPMX20_01103 at 1162.995 kb on + strand, within MPMX20_01103 at 1162.998 kb on - strand, within MPMX20_01103 at 1163.029 kb on + strand, within MPMX20_01103 at 1163.031 kb on - strand, within MPMX20_01103 at 1163.040 kb on + strand, within MPMX20_01103 at 1163.040 kb on + strand, within MPMX20_01103 at 1163.048 kb on - strand, within MPMX20_01103 at 1163.094 kb on - strand, within MPMX20_01103 at 1163.105 kb on + strand, within MPMX20_01103 at 1163.142 kb on - strand, within MPMX20_01103 at 1163.167 kb on + strand, within MPMX20_01103 at 1163.236 kb on + strand at 1163.289 kb on - strand at 1163.289 kb on - strand at 1163.320 kb on - strand at 1163.414 kb on - strand, within MPMX20_01104 at 1163.466 kb on + strand, within MPMX20_01104 at 1163.474 kb on - strand, within MPMX20_01104 at 1163.479 kb on - strand, within MPMX20_01104 at 1163.573 kb on + strand, within MPMX20_01104 at 1163.591 kb on - strand, within MPMX20_01104 at 1163.679 kb on + strand, within MPMX20_01104 at 1163.763 kb on + strand, within MPMX20_01104 at 1163.776 kb on - strand, within MPMX20_01104 at 1163.795 kb on - strand, within MPMX20_01104 at 1163.992 kb on + strand, within MPMX20_01104 at 1164.032 kb on + strand, within MPMX20_01104 at 1164.065 kb on - strand, within MPMX20_01104 at 1164.079 kb on - strand, within MPMX20_01104 at 1164.111 kb on + strand, within MPMX20_01104 at 1164.111 kb on + strand, within MPMX20_01104 at 1164.119 kb on - strand, within MPMX20_01104 at 1164.119 kb on - strand, within MPMX20_01104 at 1164.126 kb on + strand, within MPMX20_01104 at 1164.134 kb on - strand, within MPMX20_01104 at 1164.153 kb on - strand, within MPMX20_01104 at 1164.170 kb on + strand, within MPMX20_01104 at 1164.175 kb on + strand, within MPMX20_01104 at 1164.183 kb on - strand, within MPMX20_01104 at 1164.183 kb on - strand, within MPMX20_01104 at 1164.251 kb on - strand at 1164.251 kb on - strand at 1164.252 kb on + strand at 1164.264 kb on + strand at 1164.355 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.370 kb on + strand at 1164.373 kb on - strand at 1164.373 kb on - strand at 1164.373 kb on - strand at 1164.428 kb on + strand at 1164.429 kb on - strand at 1164.498 kb on + strand at 1164.498 kb on + strand at 1164.512 kb on + strand at 1164.599 kb on + strand, within MPMX20_01105 at 1164.617 kb on - strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.666 kb on + strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.674 kb on - strand, within MPMX20_01105 at 1164.730 kb on + strand, within MPMX20_01105 at 1164.794 kb on - strand, within MPMX20_01105 at 1164.823 kb on + strand, within MPMX20_01105 at 1164.831 kb on - strand, within MPMX20_01105 at 1164.918 kb on + strand, within MPMX20_01105 at 1164.918 kb on + strand, within MPMX20_01105 at 1164.918 kb on + strand, within MPMX20_01105 at 1164.926 kb on - strand, within MPMX20_01105 at 1164.926 kb on - strand, within MPMX20_01105 at 1164.926 kb on - strand, within MPMX20_01105 at 1164.962 kb on - strand, within MPMX20_01105 at 1164.979 kb on + strand, within MPMX20_01105 at 1164.980 kb on - strand, within MPMX20_01105 at 1164.987 kb on - strand, within MPMX20_01105 at 1165.105 kb on - strand, within MPMX20_01105 at 1165.182 kb on - strand, within MPMX20_01105 at 1165.219 kb on - strand, within MPMX20_01105 at 1165.219 kb on - strand, within MPMX20_01105 at 1165.244 kb on + strand, within MPMX20_01105 at 1165.262 kb on - strand, within MPMX20_01105 at 1165.275 kb on + strand, within MPMX20_01105 at 1165.280 kb on + strand, within MPMX20_01105 at 1165.280 kb on + strand, within MPMX20_01105 at 1165.288 kb on - strand, within MPMX20_01105 at 1165.303 kb on + strand, within MPMX20_01105
Per-strain Table
Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB remove 1,162,629 - +0.8 1,162,644 - -0.7 1,162,698 + +0.3 1,162,715 + -0.8 1,162,723 - +2.0 1,162,728 - -0.3 1,162,742 - -0.4 1,162,757 - MPMX20_01103 0.11 +0.7 1,162,759 + MPMX20_01103 0.11 -1.2 1,162,802 - MPMX20_01103 0.19 +0.0 1,162,880 - MPMX20_01103 0.34 +0.6 1,162,932 + MPMX20_01103 0.44 -1.7 1,162,941 + MPMX20_01103 0.46 +0.1 1,162,943 + MPMX20_01103 0.46 -0.8 1,162,951 - MPMX20_01103 0.48 -0.6 1,162,963 + MPMX20_01103 0.50 -0.6 1,162,963 + MPMX20_01103 0.50 -0.7 1,162,963 + MPMX20_01103 0.50 -0.4 1,162,971 - MPMX20_01103 0.52 +0.0 1,162,995 + MPMX20_01103 0.56 +0.1 1,162,998 - MPMX20_01103 0.57 -1.0 1,163,029 + MPMX20_01103 0.63 -0.3 1,163,031 - MPMX20_01103 0.63 +0.0 1,163,040 + MPMX20_01103 0.65 -1.3 1,163,040 + MPMX20_01103 0.65 +0.0 1,163,048 - MPMX20_01103 0.66 +0.1 1,163,094 - MPMX20_01103 0.75 -1.0 1,163,105 + MPMX20_01103 0.77 +3.0 1,163,142 - MPMX20_01103 0.84 -0.2 1,163,167 + MPMX20_01103 0.89 -0.3 1,163,236 + -0.7 1,163,289 - -1.1 1,163,289 - +0.3 1,163,320 - +0.4 1,163,414 - MPMX20_01104 0.12 -1.7 1,163,466 + MPMX20_01104 0.17 -0.9 1,163,474 - MPMX20_01104 0.18 -1.2 1,163,479 - MPMX20_01104 0.18 +0.3 1,163,573 + MPMX20_01104 0.27 -2.6 1,163,591 - MPMX20_01104 0.29 -0.6 1,163,679 + MPMX20_01104 0.38 -2.4 1,163,763 + MPMX20_01104 0.46 +0.1 1,163,776 - MPMX20_01104 0.47 +0.2 1,163,795 - MPMX20_01104 0.49 +0.8 1,163,992 + MPMX20_01104 0.68 -1.2 1,164,032 + MPMX20_01104 0.72 -1.0 1,164,065 - MPMX20_01104 0.76 -1.8 1,164,079 - MPMX20_01104 0.77 +0.6 1,164,111 + MPMX20_01104 0.80 -0.6 1,164,111 + MPMX20_01104 0.80 +2.0 1,164,119 - MPMX20_01104 0.81 +0.2 1,164,119 - MPMX20_01104 0.81 -0.9 1,164,126 + MPMX20_01104 0.82 -0.4 1,164,134 - MPMX20_01104 0.82 -0.6 1,164,153 - MPMX20_01104 0.84 +0.3 1,164,170 + MPMX20_01104 0.86 +2.0 1,164,175 + MPMX20_01104 0.86 -0.7 1,164,183 - MPMX20_01104 0.87 -0.7 1,164,183 - MPMX20_01104 0.87 -0.2 1,164,251 - -0.6 1,164,251 - -1.2 1,164,252 + +1.2 1,164,264 + -2.0 1,164,355 + +0.5 1,164,365 + +0.4 1,164,365 + +0.8 1,164,365 + -0.6 1,164,365 + +0.9 1,164,365 + +0.2 1,164,365 + -0.8 1,164,365 + -0.7 1,164,370 + +0.4 1,164,373 - +0.9 1,164,373 - +0.3 1,164,373 - -0.0 1,164,428 + +1.1 1,164,429 - -0.6 1,164,498 + -0.4 1,164,498 + -0.4 1,164,512 + +0.4 1,164,599 + MPMX20_01105 0.13 +0.7 1,164,617 - MPMX20_01105 0.15 -1.0 1,164,666 + MPMX20_01105 0.18 +0.9 1,164,666 + MPMX20_01105 0.18 -0.3 1,164,666 + MPMX20_01105 0.18 -0.6 1,164,666 + MPMX20_01105 0.18 +1.8 1,164,666 + MPMX20_01105 0.18 +0.2 1,164,666 + MPMX20_01105 0.18 -0.4 1,164,674 - MPMX20_01105 0.18 +0.1 1,164,674 - MPMX20_01105 0.18 +1.3 1,164,674 - MPMX20_01105 0.18 -0.1 1,164,674 - MPMX20_01105 0.18 +0.4 1,164,730 + MPMX20_01105 0.22 -1.3 1,164,794 - MPMX20_01105 0.26 -1.5 1,164,823 + MPMX20_01105 0.28 -0.7 1,164,831 - MPMX20_01105 0.29 -0.4 1,164,918 + MPMX20_01105 0.35 -1.3 1,164,918 + MPMX20_01105 0.35 +0.2 1,164,918 + MPMX20_01105 0.35 -0.0 1,164,926 - MPMX20_01105 0.35 +0.4 1,164,926 - MPMX20_01105 0.35 -0.1 1,164,926 - MPMX20_01105 0.35 -0.8 1,164,962 - MPMX20_01105 0.38 +1.7 1,164,979 + MPMX20_01105 0.39 +0.8 1,164,980 - MPMX20_01105 0.39 -0.1 1,164,987 - MPMX20_01105 0.39 +1.3 1,165,105 - MPMX20_01105 0.47 -1.1 1,165,182 - MPMX20_01105 0.52 +0.1 1,165,219 - MPMX20_01105 0.55 -0.2 1,165,219 - MPMX20_01105 0.55 +0.7 1,165,244 + MPMX20_01105 0.56 -0.1 1,165,262 - MPMX20_01105 0.58 -0.9 1,165,275 + MPMX20_01105 0.59 -2.7 1,165,280 + MPMX20_01105 0.59 +0.7 1,165,280 + MPMX20_01105 0.59 +0.7 1,165,288 - MPMX20_01105 0.59 -0.2 1,165,303 + MPMX20_01105 0.60 +1.4
Or see this region's nucleotide sequence