Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01104

Experiment: mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01102 and MPMX20_01103 are separated by 78 nucleotidesMPMX20_01103 and MPMX20_01104 are separated by 72 nucleotidesMPMX20_01104 and MPMX20_01105 are separated by 84 nucleotides MPMX20_01102: MPMX20_01102 - Cysteine--tRNA ligase, at 1,161,238 to 1,162,623 _01102 MPMX20_01103: MPMX20_01103 - Inner membrane protein YbcI, at 1,162,702 to 1,163,223 _01103 MPMX20_01104: MPMX20_01104 - Maltose regulon regulatory protein MalI, at 1,163,296 to 1,164,312 _01104 MPMX20_01105: MPMX20_01105 - PTS system glucose-specific EIICBA component, at 1,164,397 to 1,165,896 _01105 Position (kb) 1163 1164 1165Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1162.629 kb on - strandat 1162.644 kb on - strandat 1162.698 kb on + strandat 1162.715 kb on + strandat 1162.723 kb on - strandat 1162.728 kb on - strandat 1162.742 kb on - strandat 1162.757 kb on - strand, within MPMX20_01103at 1162.759 kb on + strand, within MPMX20_01103at 1162.802 kb on - strand, within MPMX20_01103at 1162.880 kb on - strand, within MPMX20_01103at 1162.932 kb on + strand, within MPMX20_01103at 1162.941 kb on + strand, within MPMX20_01103at 1162.943 kb on + strand, within MPMX20_01103at 1162.951 kb on - strand, within MPMX20_01103at 1162.963 kb on + strand, within MPMX20_01103at 1162.963 kb on + strand, within MPMX20_01103at 1162.963 kb on + strand, within MPMX20_01103at 1162.971 kb on - strand, within MPMX20_01103at 1162.995 kb on + strand, within MPMX20_01103at 1162.998 kb on - strand, within MPMX20_01103at 1163.029 kb on + strand, within MPMX20_01103at 1163.031 kb on - strand, within MPMX20_01103at 1163.040 kb on + strand, within MPMX20_01103at 1163.040 kb on + strand, within MPMX20_01103at 1163.048 kb on - strand, within MPMX20_01103at 1163.094 kb on - strand, within MPMX20_01103at 1163.105 kb on + strand, within MPMX20_01103at 1163.142 kb on - strand, within MPMX20_01103at 1163.167 kb on + strand, within MPMX20_01103at 1163.236 kb on + strandat 1163.289 kb on - strandat 1163.289 kb on - strandat 1163.320 kb on - strandat 1163.414 kb on - strand, within MPMX20_01104at 1163.466 kb on + strand, within MPMX20_01104at 1163.474 kb on - strand, within MPMX20_01104at 1163.479 kb on - strand, within MPMX20_01104at 1163.573 kb on + strand, within MPMX20_01104at 1163.591 kb on - strand, within MPMX20_01104at 1163.679 kb on + strand, within MPMX20_01104at 1163.763 kb on + strand, within MPMX20_01104at 1163.776 kb on - strand, within MPMX20_01104at 1163.795 kb on - strand, within MPMX20_01104at 1163.992 kb on + strand, within MPMX20_01104at 1164.032 kb on + strand, within MPMX20_01104at 1164.065 kb on - strand, within MPMX20_01104at 1164.079 kb on - strand, within MPMX20_01104at 1164.111 kb on + strand, within MPMX20_01104at 1164.111 kb on + strand, within MPMX20_01104at 1164.119 kb on - strand, within MPMX20_01104at 1164.119 kb on - strand, within MPMX20_01104at 1164.126 kb on + strand, within MPMX20_01104at 1164.134 kb on - strand, within MPMX20_01104at 1164.153 kb on - strand, within MPMX20_01104at 1164.170 kb on + strand, within MPMX20_01104at 1164.175 kb on + strand, within MPMX20_01104at 1164.183 kb on - strand, within MPMX20_01104at 1164.183 kb on - strand, within MPMX20_01104at 1164.251 kb on - strandat 1164.251 kb on - strandat 1164.252 kb on + strandat 1164.264 kb on + strandat 1164.355 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.365 kb on + strandat 1164.370 kb on + strandat 1164.373 kb on - strandat 1164.373 kb on - strandat 1164.373 kb on - strandat 1164.428 kb on + strandat 1164.429 kb on - strandat 1164.498 kb on + strandat 1164.498 kb on + strandat 1164.512 kb on + strandat 1164.599 kb on + strand, within MPMX20_01105at 1164.617 kb on - strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.666 kb on + strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.674 kb on - strand, within MPMX20_01105at 1164.730 kb on + strand, within MPMX20_01105at 1164.794 kb on - strand, within MPMX20_01105at 1164.823 kb on + strand, within MPMX20_01105at 1164.831 kb on - strand, within MPMX20_01105at 1164.918 kb on + strand, within MPMX20_01105at 1164.918 kb on + strand, within MPMX20_01105at 1164.918 kb on + strand, within MPMX20_01105at 1164.926 kb on - strand, within MPMX20_01105at 1164.926 kb on - strand, within MPMX20_01105at 1164.926 kb on - strand, within MPMX20_01105at 1164.962 kb on - strand, within MPMX20_01105at 1164.979 kb on + strand, within MPMX20_01105at 1164.980 kb on - strand, within MPMX20_01105at 1164.987 kb on - strand, within MPMX20_01105at 1165.105 kb on - strand, within MPMX20_01105at 1165.182 kb on - strand, within MPMX20_01105at 1165.219 kb on - strand, within MPMX20_01105at 1165.219 kb on - strand, within MPMX20_01105at 1165.244 kb on + strand, within MPMX20_01105at 1165.262 kb on - strand, within MPMX20_01105at 1165.275 kb on + strand, within MPMX20_01105at 1165.280 kb on + strand, within MPMX20_01105at 1165.280 kb on + strand, within MPMX20_01105at 1165.288 kb on - strand, within MPMX20_01105at 1165.303 kb on + strand, within MPMX20_01105

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Per-strain Table

Position Strand Gene LocusTag Fraction mutant library grown in Supernatant; Inquilinus sp. 005-A5 grown in LB
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1,162,629 - +0.8
1,162,644 - -0.7
1,162,698 + +0.3
1,162,715 + -0.8
1,162,723 - +2.0
1,162,728 - -0.3
1,162,742 - -0.4
1,162,757 - MPMX20_01103 0.11 +0.7
1,162,759 + MPMX20_01103 0.11 -1.2
1,162,802 - MPMX20_01103 0.19 +0.0
1,162,880 - MPMX20_01103 0.34 +0.6
1,162,932 + MPMX20_01103 0.44 -1.7
1,162,941 + MPMX20_01103 0.46 +0.1
1,162,943 + MPMX20_01103 0.46 -0.8
1,162,951 - MPMX20_01103 0.48 -0.6
1,162,963 + MPMX20_01103 0.50 -0.6
1,162,963 + MPMX20_01103 0.50 -0.7
1,162,963 + MPMX20_01103 0.50 -0.4
1,162,971 - MPMX20_01103 0.52 +0.0
1,162,995 + MPMX20_01103 0.56 +0.1
1,162,998 - MPMX20_01103 0.57 -1.0
1,163,029 + MPMX20_01103 0.63 -0.3
1,163,031 - MPMX20_01103 0.63 +0.0
1,163,040 + MPMX20_01103 0.65 -1.3
1,163,040 + MPMX20_01103 0.65 +0.0
1,163,048 - MPMX20_01103 0.66 +0.1
1,163,094 - MPMX20_01103 0.75 -1.0
1,163,105 + MPMX20_01103 0.77 +3.0
1,163,142 - MPMX20_01103 0.84 -0.2
1,163,167 + MPMX20_01103 0.89 -0.3
1,163,236 + -0.7
1,163,289 - -1.1
1,163,289 - +0.3
1,163,320 - +0.4
1,163,414 - MPMX20_01104 0.12 -1.7
1,163,466 + MPMX20_01104 0.17 -0.9
1,163,474 - MPMX20_01104 0.18 -1.2
1,163,479 - MPMX20_01104 0.18 +0.3
1,163,573 + MPMX20_01104 0.27 -2.6
1,163,591 - MPMX20_01104 0.29 -0.6
1,163,679 + MPMX20_01104 0.38 -2.4
1,163,763 + MPMX20_01104 0.46 +0.1
1,163,776 - MPMX20_01104 0.47 +0.2
1,163,795 - MPMX20_01104 0.49 +0.8
1,163,992 + MPMX20_01104 0.68 -1.2
1,164,032 + MPMX20_01104 0.72 -1.0
1,164,065 - MPMX20_01104 0.76 -1.8
1,164,079 - MPMX20_01104 0.77 +0.6
1,164,111 + MPMX20_01104 0.80 -0.6
1,164,111 + MPMX20_01104 0.80 +2.0
1,164,119 - MPMX20_01104 0.81 +0.2
1,164,119 - MPMX20_01104 0.81 -0.9
1,164,126 + MPMX20_01104 0.82 -0.4
1,164,134 - MPMX20_01104 0.82 -0.6
1,164,153 - MPMX20_01104 0.84 +0.3
1,164,170 + MPMX20_01104 0.86 +2.0
1,164,175 + MPMX20_01104 0.86 -0.7
1,164,183 - MPMX20_01104 0.87 -0.7
1,164,183 - MPMX20_01104 0.87 -0.2
1,164,251 - -0.6
1,164,251 - -1.2
1,164,252 + +1.2
1,164,264 + -2.0
1,164,355 + +0.5
1,164,365 + +0.4
1,164,365 + +0.8
1,164,365 + -0.6
1,164,365 + +0.9
1,164,365 + +0.2
1,164,365 + -0.8
1,164,365 + -0.7
1,164,370 + +0.4
1,164,373 - +0.9
1,164,373 - +0.3
1,164,373 - -0.0
1,164,428 + +1.1
1,164,429 - -0.6
1,164,498 + -0.4
1,164,498 + -0.4
1,164,512 + +0.4
1,164,599 + MPMX20_01105 0.13 +0.7
1,164,617 - MPMX20_01105 0.15 -1.0
1,164,666 + MPMX20_01105 0.18 +0.9
1,164,666 + MPMX20_01105 0.18 -0.3
1,164,666 + MPMX20_01105 0.18 -0.6
1,164,666 + MPMX20_01105 0.18 +1.8
1,164,666 + MPMX20_01105 0.18 +0.2
1,164,666 + MPMX20_01105 0.18 -0.4
1,164,674 - MPMX20_01105 0.18 +0.1
1,164,674 - MPMX20_01105 0.18 +1.3
1,164,674 - MPMX20_01105 0.18 -0.1
1,164,674 - MPMX20_01105 0.18 +0.4
1,164,730 + MPMX20_01105 0.22 -1.3
1,164,794 - MPMX20_01105 0.26 -1.5
1,164,823 + MPMX20_01105 0.28 -0.7
1,164,831 - MPMX20_01105 0.29 -0.4
1,164,918 + MPMX20_01105 0.35 -1.3
1,164,918 + MPMX20_01105 0.35 +0.2
1,164,918 + MPMX20_01105 0.35 -0.0
1,164,926 - MPMX20_01105 0.35 +0.4
1,164,926 - MPMX20_01105 0.35 -0.1
1,164,926 - MPMX20_01105 0.35 -0.8
1,164,962 - MPMX20_01105 0.38 +1.7
1,164,979 + MPMX20_01105 0.39 +0.8
1,164,980 - MPMX20_01105 0.39 -0.1
1,164,987 - MPMX20_01105 0.39 +1.3
1,165,105 - MPMX20_01105 0.47 -1.1
1,165,182 - MPMX20_01105 0.52 +0.1
1,165,219 - MPMX20_01105 0.55 -0.2
1,165,219 - MPMX20_01105 0.55 +0.7
1,165,244 + MPMX20_01105 0.56 -0.1
1,165,262 - MPMX20_01105 0.58 -0.9
1,165,275 + MPMX20_01105 0.59 -2.7
1,165,280 + MPMX20_01105 0.59 +0.7
1,165,280 + MPMX20_01105 0.59 +0.7
1,165,288 - MPMX20_01105 0.59 -0.2
1,165,303 + MPMX20_01105 0.60 +1.4

Or see this region's nucleotide sequence