Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS09925

Experiment: Aerobic, pH5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aerobic, pH5.5
2,119,950	-				+0.9
2,120,062	+		ABCV34_RS09920	0.17	-2.4
2,120,062	+		ABCV34_RS09920	0.17	-1.1
2,120,063	-		ABCV34_RS09920	0.17	-3.8
2,120,063	-		ABCV34_RS09920	0.17	-5.0
2,120,063	-		ABCV34_RS09920	0.17	-5.6
2,120,063	-		ABCV34_RS09920	0.17	-3.2
2,120,063	-		ABCV34_RS09920	0.17	-5.3
2,120,588	+				-3.3
2,120,589	-				-1.0
2,120,589	-				-3.0
2,120,589	-				-2.9
2,120,589	-				-3.0
2,120,589	-				-2.8
2,120,589	-				-2.9
2,120,589	-				-2.8
2,120,589	-				-0.1
2,120,719	+				-3.1
2,120,731	+				-3.9
2,120,731	+				-2.9
2,120,735	+				-2.9
2,120,735	+				-2.5
2,120,735	+				-1.9
2,120,735	+				-2.3
2,120,735	+				-3.0
2,120,735	+				-3.7
2,120,735	+				-2.3
2,120,735	+				-3.2
2,120,735	+				-3.5
2,120,735	+				-3.7
2,120,735	+				-2.9
2,120,735	+				-3.3
2,120,735	+				-4.0
2,120,735	+				-4.4
2,120,735	+				-2.6
2,120,736	-				-2.7
2,120,736	-				-2.7
2,120,736	-				-0.1
2,120,736	-				-3.2
2,120,736	-				-2.7
2,120,736	-				-3.1
2,120,736	-				-0.1
2,120,736	-				-1.8
2,120,736	-				-3.7
2,120,736	-				-2.7
2,120,736	-				-3.0
2,120,753	+				-2.4
2,120,753	+				-2.8
2,120,753	+				-1.7
2,120,754	-				-2.2
2,120,754	-				-3.5
2,120,754	-				-3.1
2,120,782	+				-3.0
2,120,798	-				-0.1
2,120,868	+				-3.7
2,120,869	-				-2.0
2,120,869	-				-3.4
2,120,928	+				-2.7
2,120,928	+				-0.1
2,120,928	+				-0.1
2,120,928	+				-2.1
2,120,928	+				-2.7
2,120,929	-				-2.7
2,120,929	-				-2.7
2,120,929	-				-1.3
2,120,929	-				-1.4
2,120,929	-				-0.1
2,120,967	+				-2.3
2,121,040	+		ABCV34_RS09925	0.13	-2.3
2,121,040	+		ABCV34_RS09925	0.13	-0.1
2,121,040	+		ABCV34_RS09925	0.13	-2.9
2,121,041	-		ABCV34_RS09925	0.13	-1.8
2,121,041	-		ABCV34_RS09925	0.13	-5.0
2,121,041	-		ABCV34_RS09925	0.13	-2.4
2,121,041	-		ABCV34_RS09925	0.13	-0.1
2,121,041	-		ABCV34_RS09925	0.13	-2.3
2,121,041	-		ABCV34_RS09925	0.13	-3.7
2,121,041	-		ABCV34_RS09925	0.13	-2.7
2,121,041	-		ABCV34_RS09925	0.13	-2.4
2,121,111	+		ABCV34_RS09925	0.17	-0.1
2,121,112	-		ABCV34_RS09925	0.17	-2.3
2,121,112	-		ABCV34_RS09925	0.17	-2.0
2,121,130	+		ABCV34_RS09925	0.18	-2.4
2,121,131	-		ABCV34_RS09925	0.18	-1.7
2,121,141	+		ABCV34_RS09925	0.19	-3.5
2,121,141	+		ABCV34_RS09925	0.19	-2.5
2,121,141	+		ABCV34_RS09925	0.19	-1.7
2,121,141	+		ABCV34_RS09925	0.19	-3.1
2,121,141	+		ABCV34_RS09925	0.19	-2.5
2,121,141	+		ABCV34_RS09925	0.19	-2.8
2,121,141	+		ABCV34_RS09925	0.19	-3.2
2,121,141	+		ABCV34_RS09925	0.19	-1.4
2,121,141	+		ABCV34_RS09925	0.19	-3.3
2,121,141	+		ABCV34_RS09925	0.19	-0.1
2,121,141	+		ABCV34_RS09925	0.19	-1.9
2,121,141	+		ABCV34_RS09925	0.19	-2.7
2,121,141	+		ABCV34_RS09925	0.19	-1.1
2,121,142	-		ABCV34_RS09925	0.19	-3.0
2,121,142	-		ABCV34_RS09925	0.19	-3.3
2,121,142	-		ABCV34_RS09925	0.19	-0.1
2,121,142	-		ABCV34_RS09925	0.19	-2.6
2,121,142	-		ABCV34_RS09925	0.19	-1.4
2,121,142	-		ABCV34_RS09925	0.19	-2.8
2,121,142	-		ABCV34_RS09925	0.19	-1.1
2,121,142	-		ABCV34_RS09925	0.19	-0.7
2,121,142	-		ABCV34_RS09925	0.19	-3.7
2,121,165	+		ABCV34_RS09925	0.20	-1.9
2,121,165	+		ABCV34_RS09925	0.20	-2.6
2,121,165	+		ABCV34_RS09925	0.20	-2.9
2,121,165	+		ABCV34_RS09925	0.20	-2.0
2,121,166	-		ABCV34_RS09925	0.20	-2.4
2,121,166	-		ABCV34_RS09925	0.20	-3.2
2,121,166	-		ABCV34_RS09925	0.20	-2.8
2,121,166	-		ABCV34_RS09925	0.20	-3.4
2,121,166	-		ABCV34_RS09925	0.20	-2.3
2,121,380	+		ABCV34_RS09925	0.34	-2.8
2,121,380	+		ABCV34_RS09925	0.34	-2.6
2,121,380	+		ABCV34_RS09925	0.34	-2.2
2,121,380	+		ABCV34_RS09925	0.34	-2.0
2,121,380	+		ABCV34_RS09925	0.34	-2.6
2,121,381	-		ABCV34_RS09925	0.34	-2.0
2,121,381	-		ABCV34_RS09925	0.34	-3.6
2,121,381	-		ABCV34_RS09925	0.34	-2.8
2,121,381	-		ABCV34_RS09925	0.34	-2.5
2,121,571	+		ABCV34_RS09925	0.45	-1.2
2,121,571	+		ABCV34_RS09925	0.45	-2.0
2,121,571	+		ABCV34_RS09925	0.45	-2.3
2,121,571	+		ABCV34_RS09925	0.45	-2.6
2,121,572	-		ABCV34_RS09925	0.45	-2.6
2,121,572	-		ABCV34_RS09925	0.45	-3.9
2,121,572	-		ABCV34_RS09925	0.45	-0.1
2,121,572	-		ABCV34_RS09925	0.45	-1.7
2,121,572	-		ABCV34_RS09925	0.45	-2.7
2,121,782	+		ABCV34_RS09925	0.58	-2.7
2,121,782	+		ABCV34_RS09925	0.58	-2.3
2,121,915	-		ABCV34_RS09925	0.66	-0.1
2,121,954	-		ABCV34_RS09925	0.69	-2.8
2,122,053	-		ABCV34_RS09925	0.75	-2.7
2,122,053	-		ABCV34_RS09925	0.75	-2.8
2,122,172	+		ABCV34_RS09925	0.82	-2.5
2,122,173	-		ABCV34_RS09925	0.82	-0.1
2,122,516	+		ABCV34_RS09930	0.12	-1.6
2,122,517	-		ABCV34_RS09930	0.12	-2.5
2,122,517	-		ABCV34_RS09930	0.12	-2.9
2,122,517	-		ABCV34_RS09930	0.12	-2.8
2,122,653	-		ABCV34_RS09930	0.35	-2.8
2,123,016	+				-2.0
2,123,016	+				-2.5
2,123,016	+				-2.2
2,123,016	+				-2.3
2,123,016	+				-2.5
2,123,016	+				-2.7
2,123,016	+				-1.7
2,123,016	+				-2.6
2,123,016	-				-3.3
2,123,017	-				-3.0
2,123,017	-				-2.5
2,123,017	-				-2.3
2,123,017	-				-3.0
2,123,017	-				-2.6
2,123,017	-				-2.2
2,123,017	-				-2.9
2,123,017	-				-2.3
2,123,017	-				-1.8
2,123,017	-				-3.8