Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04290

Experiment: L-Glutamine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_04289 and MPMX20_04290 are separated by 353 nucleotidesMPMX20_04290 and MPMX20_04291 are separated by 47 nucleotides MPMX20_04289: MPMX20_04289 - 33 kDa chaperonin, at 4,472,858 to 4,473,736 _04289 MPMX20_04290: MPMX20_04290 - Phosphoenolpyruvate carboxykinase (ATP), at 4,474,090 to 4,475,709 _04290 MPMX20_04291: MPMX20_04291 - Osmolarity sensor protein EnvZ, at 4,475,757 to 4,477,103 _04291 Position (kb) 4474 4475 4476Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4473.181 kb on + strand, within MPMX20_04289at 4473.189 kb on - strand, within MPMX20_04289at 4473.243 kb on - strand, within MPMX20_04289at 4473.294 kb on + strand, within MPMX20_04289at 4473.294 kb on + strand, within MPMX20_04289at 4473.294 kb on + strand, within MPMX20_04289at 4473.312 kb on - strand, within MPMX20_04289at 4473.331 kb on + strand, within MPMX20_04289at 4473.416 kb on - strand, within MPMX20_04289at 4473.426 kb on - strand, within MPMX20_04289at 4473.439 kb on + strand, within MPMX20_04289at 4473.452 kb on - strand, within MPMX20_04289at 4473.479 kb on + strand, within MPMX20_04289at 4473.557 kb on + strand, within MPMX20_04289at 4473.565 kb on - strand, within MPMX20_04289at 4473.643 kb on - strand, within MPMX20_04289at 4473.746 kb on + strandat 4473.751 kb on + strandat 4473.752 kb on + strandat 4473.752 kb on + strandat 4473.794 kb on + strandat 4473.812 kb on + strandat 4473.830 kb on - strandat 4473.899 kb on - strandat 4473.929 kb on - strandat 4473.966 kb on - strandat 4473.990 kb on + strandat 4474.028 kb on + strandat 4474.054 kb on + strandat 4474.110 kb on - strandat 4474.133 kb on - strandat 4474.182 kb on + strandat 4474.182 kb on + strandat 4474.194 kb on + strandat 4474.194 kb on + strandat 4474.194 kb on + strandat 4474.202 kb on - strandat 4474.207 kb on - strandat 4474.207 kb on - strandat 4474.207 kb on - strandat 4474.327 kb on + strand, within MPMX20_04290at 4474.332 kb on + strand, within MPMX20_04290at 4474.332 kb on + strand, within MPMX20_04290at 4474.340 kb on - strand, within MPMX20_04290at 4474.340 kb on - strand, within MPMX20_04290at 4474.340 kb on - strand, within MPMX20_04290at 4474.401 kb on + strand, within MPMX20_04290at 4474.406 kb on + strand, within MPMX20_04290at 4474.636 kb on + strand, within MPMX20_04290at 4474.661 kb on + strand, within MPMX20_04290at 4474.661 kb on + strand, within MPMX20_04290at 4474.661 kb on + strand, within MPMX20_04290at 4474.661 kb on + strand, within MPMX20_04290at 4474.661 kb on + strand, within MPMX20_04290at 4474.661 kb on + strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.669 kb on - strand, within MPMX20_04290at 4474.687 kb on - strand, within MPMX20_04290at 4474.697 kb on + strand, within MPMX20_04290at 4474.774 kb on + strand, within MPMX20_04290at 4474.792 kb on - strand, within MPMX20_04290at 4474.823 kb on + strand, within MPMX20_04290at 4474.841 kb on - strand, within MPMX20_04290at 4474.851 kb on - strand, within MPMX20_04290at 4474.899 kb on + strand, within MPMX20_04290at 4474.901 kb on + strand, within MPMX20_04290at 4474.918 kb on + strand, within MPMX20_04290at 4474.928 kb on - strand, within MPMX20_04290at 4474.935 kb on + strand, within MPMX20_04290at 4474.960 kb on - strand, within MPMX20_04290at 4474.962 kb on + strand, within MPMX20_04290at 4474.970 kb on - strand, within MPMX20_04290at 4475.088 kb on + strand, within MPMX20_04290at 4475.095 kb on - strand, within MPMX20_04290at 4475.259 kb on + strand, within MPMX20_04290at 4475.259 kb on + strand, within MPMX20_04290at 4475.267 kb on - strand, within MPMX20_04290at 4475.276 kb on + strand, within MPMX20_04290at 4475.346 kb on + strand, within MPMX20_04290at 4475.386 kb on + strand, within MPMX20_04290at 4475.391 kb on + strand, within MPMX20_04290at 4475.398 kb on + strand, within MPMX20_04290at 4475.399 kb on - strand, within MPMX20_04290at 4475.399 kb on - strand, within MPMX20_04290at 4475.465 kb on + strand, within MPMX20_04290at 4475.509 kb on - strand, within MPMX20_04290at 4475.581 kb on + strandat 4475.589 kb on - strandat 4475.591 kb on + strandat 4475.591 kb on + strandat 4475.685 kb on + strandat 4475.693 kb on - strandat 4475.710 kb on + strandat 4475.710 kb on + strandat 4475.715 kb on + strandat 4475.723 kb on - strandat 4475.763 kb on + strandat 4475.772 kb on - strandat 4475.851 kb on + strandat 4475.896 kb on - strand, within MPMX20_04291at 4475.896 kb on - strand, within MPMX20_04291at 4475.896 kb on - strand, within MPMX20_04291at 4475.903 kb on + strand, within MPMX20_04291at 4475.903 kb on + strand, within MPMX20_04291at 4475.958 kb on - strand, within MPMX20_04291at 4475.960 kb on + strand, within MPMX20_04291at 4475.992 kb on + strand, within MPMX20_04291at 4476.014 kb on + strand, within MPMX20_04291at 4476.017 kb on - strand, within MPMX20_04291at 4476.069 kb on - strand, within MPMX20_04291at 4476.069 kb on - strand, within MPMX20_04291at 4476.069 kb on - strand, within MPMX20_04291at 4476.079 kb on - strand, within MPMX20_04291at 4476.081 kb on - strand, within MPMX20_04291at 4476.235 kb on + strand, within MPMX20_04291at 4476.255 kb on - strand, within MPMX20_04291at 4476.268 kb on + strand, within MPMX20_04291at 4476.276 kb on - strand, within MPMX20_04291at 4476.276 kb on - strand, within MPMX20_04291at 4476.276 kb on - strand, within MPMX20_04291at 4476.338 kb on - strand, within MPMX20_04291at 4476.371 kb on + strand, within MPMX20_04291at 4476.371 kb on + strand, within MPMX20_04291at 4476.379 kb on - strand, within MPMX20_04291at 4476.379 kb on - strand, within MPMX20_04291at 4476.379 kb on - strand, within MPMX20_04291at 4476.379 kb on - strand, within MPMX20_04291at 4476.379 kb on - strand, within MPMX20_04291at 4476.379 kb on - strand, within MPMX20_04291at 4476.406 kb on - strand, within MPMX20_04291at 4476.411 kb on - strand, within MPMX20_04291at 4476.419 kb on + strand, within MPMX20_04291at 4476.508 kb on - strand, within MPMX20_04291at 4476.527 kb on - strand, within MPMX20_04291at 4476.527 kb on - strand, within MPMX20_04291at 4476.533 kb on + strand, within MPMX20_04291at 4476.533 kb on + strand, within MPMX20_04291at 4476.541 kb on - strand, within MPMX20_04291at 4476.541 kb on - strand, within MPMX20_04291at 4476.599 kb on + strand, within MPMX20_04291at 4476.599 kb on + strand, within MPMX20_04291at 4476.607 kb on - strand, within MPMX20_04291at 4476.607 kb on - strand, within MPMX20_04291

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
remove
4,473,181 + MPMX20_04289 0.37 +0.3
4,473,189 - MPMX20_04289 0.38 -0.3
4,473,243 - MPMX20_04289 0.44 +0.3
4,473,294 + MPMX20_04289 0.50 +0.8
4,473,294 + MPMX20_04289 0.50 -1.5
4,473,294 + MPMX20_04289 0.50 +0.5
4,473,312 - MPMX20_04289 0.52 +0.1
4,473,331 + MPMX20_04289 0.54 -0.6
4,473,416 - MPMX20_04289 0.63 -0.6
4,473,426 - MPMX20_04289 0.65 +0.1
4,473,439 + MPMX20_04289 0.66 -0.3
4,473,452 - MPMX20_04289 0.68 +3.5
4,473,479 + MPMX20_04289 0.71 +0.8
4,473,557 + MPMX20_04289 0.80 -1.2
4,473,565 - MPMX20_04289 0.80 -1.8
4,473,643 - MPMX20_04289 0.89 +0.6
4,473,746 + -0.1
4,473,751 + +0.4
4,473,752 + +0.8
4,473,752 + -0.1
4,473,794 + -0.5
4,473,812 + -0.3
4,473,830 - +0.9
4,473,899 - -0.6
4,473,929 - +0.8
4,473,966 - -0.8
4,473,990 + +0.5
4,474,028 + -0.8
4,474,054 + -1.9
4,474,110 - -0.5
4,474,133 - -1.0
4,474,182 + -3.5
4,474,182 + -1.6
4,474,194 + -3.4
4,474,194 + -1.5
4,474,194 + -0.5
4,474,202 - -0.7
4,474,207 - -1.1
4,474,207 - +0.0
4,474,207 - -1.4
4,474,327 + MPMX20_04290 0.15 -0.1
4,474,332 + MPMX20_04290 0.15 -1.4
4,474,332 + MPMX20_04290 0.15 -1.2
4,474,340 - MPMX20_04290 0.15 +0.3
4,474,340 - MPMX20_04290 0.15 -0.9
4,474,340 - MPMX20_04290 0.15 -2.4
4,474,401 + MPMX20_04290 0.19 -0.8
4,474,406 + MPMX20_04290 0.20 -1.8
4,474,636 + MPMX20_04290 0.34 -2.7
4,474,661 + MPMX20_04290 0.35 -1.3
4,474,661 + MPMX20_04290 0.35 -0.9
4,474,661 + MPMX20_04290 0.35 -2.1
4,474,661 + MPMX20_04290 0.35 -1.2
4,474,661 + MPMX20_04290 0.35 -2.0
4,474,661 + MPMX20_04290 0.35 -2.9
4,474,669 - MPMX20_04290 0.36 -1.7
4,474,669 - MPMX20_04290 0.36 -0.6
4,474,669 - MPMX20_04290 0.36 -1.1
4,474,669 - MPMX20_04290 0.36 -2.9
4,474,669 - MPMX20_04290 0.36 -0.4
4,474,669 - MPMX20_04290 0.36 +0.9
4,474,669 - MPMX20_04290 0.36 -1.3
4,474,669 - MPMX20_04290 0.36 -0.8
4,474,669 - MPMX20_04290 0.36 -1.9
4,474,687 - MPMX20_04290 0.37 -2.5
4,474,697 + MPMX20_04290 0.37 +0.7
4,474,774 + MPMX20_04290 0.42 -1.3
4,474,792 - MPMX20_04290 0.43 -1.2
4,474,823 + MPMX20_04290 0.45 -1.2
4,474,841 - MPMX20_04290 0.46 -2.0
4,474,851 - MPMX20_04290 0.47 +0.6
4,474,899 + MPMX20_04290 0.50 -0.8
4,474,901 + MPMX20_04290 0.50 -1.7
4,474,918 + MPMX20_04290 0.51 -1.3
4,474,928 - MPMX20_04290 0.52 -1.9
4,474,935 + MPMX20_04290 0.52 -0.3
4,474,960 - MPMX20_04290 0.54 -2.8
4,474,962 + MPMX20_04290 0.54 -1.4
4,474,970 - MPMX20_04290 0.54 -0.6
4,475,088 + MPMX20_04290 0.62 -2.7
4,475,095 - MPMX20_04290 0.62 -0.1
4,475,259 + MPMX20_04290 0.72 -1.2
4,475,259 + MPMX20_04290 0.72 -0.0
4,475,267 - MPMX20_04290 0.73 -3.7
4,475,276 + MPMX20_04290 0.73 +1.5
4,475,346 + MPMX20_04290 0.78 -1.0
4,475,386 + MPMX20_04290 0.80 -0.2
4,475,391 + MPMX20_04290 0.80 -0.9
4,475,398 + MPMX20_04290 0.81 -1.8
4,475,399 - MPMX20_04290 0.81 +0.3
4,475,399 - MPMX20_04290 0.81 -1.0
4,475,465 + MPMX20_04290 0.85 +0.1
4,475,509 - MPMX20_04290 0.88 +0.9
4,475,581 + -1.1
4,475,589 - -0.9
4,475,591 + +0.0
4,475,591 + -0.6
4,475,685 + +0.3
4,475,693 - -0.7
4,475,710 + +0.5
4,475,710 + +0.1
4,475,715 + +0.1
4,475,723 - -0.4
4,475,763 + +0.1
4,475,772 - -0.7
4,475,851 + -0.2
4,475,896 - MPMX20_04291 0.10 -0.2
4,475,896 - MPMX20_04291 0.10 +0.8
4,475,896 - MPMX20_04291 0.10 -0.5
4,475,903 + MPMX20_04291 0.11 +0.6
4,475,903 + MPMX20_04291 0.11 +0.1
4,475,958 - MPMX20_04291 0.15 -2.6
4,475,960 + MPMX20_04291 0.15 +0.1
4,475,992 + MPMX20_04291 0.17 -0.1
4,476,014 + MPMX20_04291 0.19 +0.3
4,476,017 - MPMX20_04291 0.19 -0.1
4,476,069 - MPMX20_04291 0.23 -0.7
4,476,069 - MPMX20_04291 0.23 -0.1
4,476,069 - MPMX20_04291 0.23 -0.2
4,476,079 - MPMX20_04291 0.24 +1.9
4,476,081 - MPMX20_04291 0.24 -1.3
4,476,235 + MPMX20_04291 0.35 +2.5
4,476,255 - MPMX20_04291 0.37 +0.4
4,476,268 + MPMX20_04291 0.38 -0.5
4,476,276 - MPMX20_04291 0.39 -0.3
4,476,276 - MPMX20_04291 0.39 -0.2
4,476,276 - MPMX20_04291 0.39 -0.1
4,476,338 - MPMX20_04291 0.43 +1.0
4,476,371 + MPMX20_04291 0.46 +0.1
4,476,371 + MPMX20_04291 0.46 -1.1
4,476,379 - MPMX20_04291 0.46 -1.2
4,476,379 - MPMX20_04291 0.46 -0.5
4,476,379 - MPMX20_04291 0.46 -0.2
4,476,379 - MPMX20_04291 0.46 +0.4
4,476,379 - MPMX20_04291 0.46 +0.6
4,476,379 - MPMX20_04291 0.46 +0.3
4,476,406 - MPMX20_04291 0.48 -0.1
4,476,411 - MPMX20_04291 0.49 +2.3
4,476,419 + MPMX20_04291 0.49 +1.9
4,476,508 - MPMX20_04291 0.56 -0.2
4,476,527 - MPMX20_04291 0.57 -0.8
4,476,527 - MPMX20_04291 0.57 -1.1
4,476,533 + MPMX20_04291 0.58 -0.3
4,476,533 + MPMX20_04291 0.58 -0.8
4,476,541 - MPMX20_04291 0.58 -0.2
4,476,541 - MPMX20_04291 0.58 +0.4
4,476,599 + MPMX20_04291 0.63 -1.3
4,476,599 + MPMX20_04291 0.63 +1.6
4,476,607 - MPMX20_04291 0.63 -0.1
4,476,607 - MPMX20_04291 0.63 -0.6

Or see this region's nucleotide sequence