Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04289 and MPMX20_04290 are separated by 353 nucleotides MPMX20_04290 and MPMX20_04291 are separated by 47 nucleotides
MPMX20_04289: MPMX20_04289 - 33 kDa chaperonin, at 4,472,858 to 4,473,736
_04289
MPMX20_04290: MPMX20_04290 - Phosphoenolpyruvate carboxykinase (ATP), at 4,474,090 to 4,475,709
_04290
MPMX20_04291: MPMX20_04291 - Osmolarity sensor protein EnvZ, at 4,475,757 to 4,477,103
_04291
Position (kb)
4474
4475
4476 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4473.181 kb on + strand, within MPMX20_04289 at 4473.189 kb on - strand, within MPMX20_04289 at 4473.243 kb on - strand, within MPMX20_04289 at 4473.294 kb on + strand, within MPMX20_04289 at 4473.294 kb on + strand, within MPMX20_04289 at 4473.294 kb on + strand, within MPMX20_04289 at 4473.312 kb on - strand, within MPMX20_04289 at 4473.331 kb on + strand, within MPMX20_04289 at 4473.416 kb on - strand, within MPMX20_04289 at 4473.426 kb on - strand, within MPMX20_04289 at 4473.439 kb on + strand, within MPMX20_04289 at 4473.452 kb on - strand, within MPMX20_04289 at 4473.479 kb on + strand, within MPMX20_04289 at 4473.557 kb on + strand, within MPMX20_04289 at 4473.565 kb on - strand, within MPMX20_04289 at 4473.643 kb on - strand, within MPMX20_04289 at 4473.746 kb on + strand at 4473.751 kb on + strand at 4473.752 kb on + strand at 4473.752 kb on + strand at 4473.794 kb on + strand at 4473.812 kb on + strand at 4473.830 kb on - strand at 4473.899 kb on - strand at 4473.929 kb on - strand at 4473.966 kb on - strand at 4473.990 kb on + strand at 4474.028 kb on + strand at 4474.054 kb on + strand at 4474.110 kb on - strand at 4474.133 kb on - strand at 4474.182 kb on + strand at 4474.182 kb on + strand at 4474.194 kb on + strand at 4474.194 kb on + strand at 4474.194 kb on + strand at 4474.202 kb on - strand at 4474.207 kb on - strand at 4474.207 kb on - strand at 4474.207 kb on - strand at 4474.327 kb on + strand, within MPMX20_04290 at 4474.332 kb on + strand, within MPMX20_04290 at 4474.332 kb on + strand, within MPMX20_04290 at 4474.340 kb on - strand, within MPMX20_04290 at 4474.340 kb on - strand, within MPMX20_04290 at 4474.340 kb on - strand, within MPMX20_04290 at 4474.401 kb on + strand, within MPMX20_04290 at 4474.406 kb on + strand, within MPMX20_04290 at 4474.636 kb on + strand, within MPMX20_04290 at 4474.661 kb on + strand, within MPMX20_04290 at 4474.661 kb on + strand, within MPMX20_04290 at 4474.661 kb on + strand, within MPMX20_04290 at 4474.661 kb on + strand, within MPMX20_04290 at 4474.661 kb on + strand, within MPMX20_04290 at 4474.661 kb on + strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.669 kb on - strand, within MPMX20_04290 at 4474.687 kb on - strand, within MPMX20_04290 at 4474.697 kb on + strand, within MPMX20_04290 at 4474.774 kb on + strand, within MPMX20_04290 at 4474.792 kb on - strand, within MPMX20_04290 at 4474.823 kb on + strand, within MPMX20_04290 at 4474.841 kb on - strand, within MPMX20_04290 at 4474.851 kb on - strand, within MPMX20_04290 at 4474.899 kb on + strand, within MPMX20_04290 at 4474.901 kb on + strand, within MPMX20_04290 at 4474.918 kb on + strand, within MPMX20_04290 at 4474.928 kb on - strand, within MPMX20_04290 at 4474.935 kb on + strand, within MPMX20_04290 at 4474.960 kb on - strand, within MPMX20_04290 at 4474.962 kb on + strand, within MPMX20_04290 at 4474.970 kb on - strand, within MPMX20_04290 at 4475.088 kb on + strand, within MPMX20_04290 at 4475.095 kb on - strand, within MPMX20_04290 at 4475.259 kb on + strand, within MPMX20_04290 at 4475.259 kb on + strand, within MPMX20_04290 at 4475.267 kb on - strand, within MPMX20_04290 at 4475.276 kb on + strand, within MPMX20_04290 at 4475.346 kb on + strand, within MPMX20_04290 at 4475.386 kb on + strand, within MPMX20_04290 at 4475.391 kb on + strand, within MPMX20_04290 at 4475.398 kb on + strand, within MPMX20_04290 at 4475.399 kb on - strand, within MPMX20_04290 at 4475.399 kb on - strand, within MPMX20_04290 at 4475.465 kb on + strand, within MPMX20_04290 at 4475.509 kb on - strand, within MPMX20_04290 at 4475.581 kb on + strand at 4475.589 kb on - strand at 4475.591 kb on + strand at 4475.591 kb on + strand at 4475.685 kb on + strand at 4475.693 kb on - strand at 4475.710 kb on + strand at 4475.710 kb on + strand at 4475.715 kb on + strand at 4475.723 kb on - strand at 4475.763 kb on + strand at 4475.772 kb on - strand at 4475.851 kb on + strand at 4475.896 kb on - strand, within MPMX20_04291 at 4475.896 kb on - strand, within MPMX20_04291 at 4475.896 kb on - strand, within MPMX20_04291 at 4475.903 kb on + strand, within MPMX20_04291 at 4475.903 kb on + strand, within MPMX20_04291 at 4475.958 kb on - strand, within MPMX20_04291 at 4475.960 kb on + strand, within MPMX20_04291 at 4475.992 kb on + strand, within MPMX20_04291 at 4476.014 kb on + strand, within MPMX20_04291 at 4476.017 kb on - strand, within MPMX20_04291 at 4476.069 kb on - strand, within MPMX20_04291 at 4476.069 kb on - strand, within MPMX20_04291 at 4476.069 kb on - strand, within MPMX20_04291 at 4476.079 kb on - strand, within MPMX20_04291 at 4476.081 kb on - strand, within MPMX20_04291 at 4476.235 kb on + strand, within MPMX20_04291 at 4476.255 kb on - strand, within MPMX20_04291 at 4476.268 kb on + strand, within MPMX20_04291 at 4476.276 kb on - strand, within MPMX20_04291 at 4476.276 kb on - strand, within MPMX20_04291 at 4476.276 kb on - strand, within MPMX20_04291 at 4476.338 kb on - strand, within MPMX20_04291 at 4476.371 kb on + strand, within MPMX20_04291 at 4476.371 kb on + strand, within MPMX20_04291 at 4476.379 kb on - strand, within MPMX20_04291 at 4476.379 kb on - strand, within MPMX20_04291 at 4476.379 kb on - strand, within MPMX20_04291 at 4476.379 kb on - strand, within MPMX20_04291 at 4476.379 kb on - strand, within MPMX20_04291 at 4476.379 kb on - strand, within MPMX20_04291 at 4476.406 kb on - strand, within MPMX20_04291 at 4476.411 kb on - strand, within MPMX20_04291 at 4476.419 kb on + strand, within MPMX20_04291 at 4476.508 kb on - strand, within MPMX20_04291 at 4476.527 kb on - strand, within MPMX20_04291 at 4476.527 kb on - strand, within MPMX20_04291 at 4476.533 kb on + strand, within MPMX20_04291 at 4476.533 kb on + strand, within MPMX20_04291 at 4476.541 kb on - strand, within MPMX20_04291 at 4476.541 kb on - strand, within MPMX20_04291 at 4476.599 kb on + strand, within MPMX20_04291 at 4476.599 kb on + strand, within MPMX20_04291 at 4476.607 kb on - strand, within MPMX20_04291 at 4476.607 kb on - strand, within MPMX20_04291
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 4,473,181 + MPMX20_04289 0.37 +0.3 4,473,189 - MPMX20_04289 0.38 -0.3 4,473,243 - MPMX20_04289 0.44 +0.3 4,473,294 + MPMX20_04289 0.50 +0.8 4,473,294 + MPMX20_04289 0.50 -1.5 4,473,294 + MPMX20_04289 0.50 +0.5 4,473,312 - MPMX20_04289 0.52 +0.1 4,473,331 + MPMX20_04289 0.54 -0.6 4,473,416 - MPMX20_04289 0.63 -0.6 4,473,426 - MPMX20_04289 0.65 +0.1 4,473,439 + MPMX20_04289 0.66 -0.3 4,473,452 - MPMX20_04289 0.68 +3.5 4,473,479 + MPMX20_04289 0.71 +0.8 4,473,557 + MPMX20_04289 0.80 -1.2 4,473,565 - MPMX20_04289 0.80 -1.8 4,473,643 - MPMX20_04289 0.89 +0.6 4,473,746 + -0.1 4,473,751 + +0.4 4,473,752 + +0.8 4,473,752 + -0.1 4,473,794 + -0.5 4,473,812 + -0.3 4,473,830 - +0.9 4,473,899 - -0.6 4,473,929 - +0.8 4,473,966 - -0.8 4,473,990 + +0.5 4,474,028 + -0.8 4,474,054 + -1.9 4,474,110 - -0.5 4,474,133 - -1.0 4,474,182 + -3.5 4,474,182 + -1.6 4,474,194 + -3.4 4,474,194 + -1.5 4,474,194 + -0.5 4,474,202 - -0.7 4,474,207 - -1.1 4,474,207 - +0.0 4,474,207 - -1.4 4,474,327 + MPMX20_04290 0.15 -0.1 4,474,332 + MPMX20_04290 0.15 -1.4 4,474,332 + MPMX20_04290 0.15 -1.2 4,474,340 - MPMX20_04290 0.15 +0.3 4,474,340 - MPMX20_04290 0.15 -0.9 4,474,340 - MPMX20_04290 0.15 -2.4 4,474,401 + MPMX20_04290 0.19 -0.8 4,474,406 + MPMX20_04290 0.20 -1.8 4,474,636 + MPMX20_04290 0.34 -2.7 4,474,661 + MPMX20_04290 0.35 -1.3 4,474,661 + MPMX20_04290 0.35 -0.9 4,474,661 + MPMX20_04290 0.35 -2.1 4,474,661 + MPMX20_04290 0.35 -1.2 4,474,661 + MPMX20_04290 0.35 -2.0 4,474,661 + MPMX20_04290 0.35 -2.9 4,474,669 - MPMX20_04290 0.36 -1.7 4,474,669 - MPMX20_04290 0.36 -0.6 4,474,669 - MPMX20_04290 0.36 -1.1 4,474,669 - MPMX20_04290 0.36 -2.9 4,474,669 - MPMX20_04290 0.36 -0.4 4,474,669 - MPMX20_04290 0.36 +0.9 4,474,669 - MPMX20_04290 0.36 -1.3 4,474,669 - MPMX20_04290 0.36 -0.8 4,474,669 - MPMX20_04290 0.36 -1.9 4,474,687 - MPMX20_04290 0.37 -2.5 4,474,697 + MPMX20_04290 0.37 +0.7 4,474,774 + MPMX20_04290 0.42 -1.3 4,474,792 - MPMX20_04290 0.43 -1.2 4,474,823 + MPMX20_04290 0.45 -1.2 4,474,841 - MPMX20_04290 0.46 -2.0 4,474,851 - MPMX20_04290 0.47 +0.6 4,474,899 + MPMX20_04290 0.50 -0.8 4,474,901 + MPMX20_04290 0.50 -1.7 4,474,918 + MPMX20_04290 0.51 -1.3 4,474,928 - MPMX20_04290 0.52 -1.9 4,474,935 + MPMX20_04290 0.52 -0.3 4,474,960 - MPMX20_04290 0.54 -2.8 4,474,962 + MPMX20_04290 0.54 -1.4 4,474,970 - MPMX20_04290 0.54 -0.6 4,475,088 + MPMX20_04290 0.62 -2.7 4,475,095 - MPMX20_04290 0.62 -0.1 4,475,259 + MPMX20_04290 0.72 -1.2 4,475,259 + MPMX20_04290 0.72 -0.0 4,475,267 - MPMX20_04290 0.73 -3.7 4,475,276 + MPMX20_04290 0.73 +1.5 4,475,346 + MPMX20_04290 0.78 -1.0 4,475,386 + MPMX20_04290 0.80 -0.2 4,475,391 + MPMX20_04290 0.80 -0.9 4,475,398 + MPMX20_04290 0.81 -1.8 4,475,399 - MPMX20_04290 0.81 +0.3 4,475,399 - MPMX20_04290 0.81 -1.0 4,475,465 + MPMX20_04290 0.85 +0.1 4,475,509 - MPMX20_04290 0.88 +0.9 4,475,581 + -1.1 4,475,589 - -0.9 4,475,591 + +0.0 4,475,591 + -0.6 4,475,685 + +0.3 4,475,693 - -0.7 4,475,710 + +0.5 4,475,710 + +0.1 4,475,715 + +0.1 4,475,723 - -0.4 4,475,763 + +0.1 4,475,772 - -0.7 4,475,851 + -0.2 4,475,896 - MPMX20_04291 0.10 -0.2 4,475,896 - MPMX20_04291 0.10 +0.8 4,475,896 - MPMX20_04291 0.10 -0.5 4,475,903 + MPMX20_04291 0.11 +0.6 4,475,903 + MPMX20_04291 0.11 +0.1 4,475,958 - MPMX20_04291 0.15 -2.6 4,475,960 + MPMX20_04291 0.15 +0.1 4,475,992 + MPMX20_04291 0.17 -0.1 4,476,014 + MPMX20_04291 0.19 +0.3 4,476,017 - MPMX20_04291 0.19 -0.1 4,476,069 - MPMX20_04291 0.23 -0.7 4,476,069 - MPMX20_04291 0.23 -0.1 4,476,069 - MPMX20_04291 0.23 -0.2 4,476,079 - MPMX20_04291 0.24 +1.9 4,476,081 - MPMX20_04291 0.24 -1.3 4,476,235 + MPMX20_04291 0.35 +2.5 4,476,255 - MPMX20_04291 0.37 +0.4 4,476,268 + MPMX20_04291 0.38 -0.5 4,476,276 - MPMX20_04291 0.39 -0.3 4,476,276 - MPMX20_04291 0.39 -0.2 4,476,276 - MPMX20_04291 0.39 -0.1 4,476,338 - MPMX20_04291 0.43 +1.0 4,476,371 + MPMX20_04291 0.46 +0.1 4,476,371 + MPMX20_04291 0.46 -1.1 4,476,379 - MPMX20_04291 0.46 -1.2 4,476,379 - MPMX20_04291 0.46 -0.5 4,476,379 - MPMX20_04291 0.46 -0.2 4,476,379 - MPMX20_04291 0.46 +0.4 4,476,379 - MPMX20_04291 0.46 +0.6 4,476,379 - MPMX20_04291 0.46 +0.3 4,476,406 - MPMX20_04291 0.48 -0.1 4,476,411 - MPMX20_04291 0.49 +2.3 4,476,419 + MPMX20_04291 0.49 +1.9 4,476,508 - MPMX20_04291 0.56 -0.2 4,476,527 - MPMX20_04291 0.57 -0.8 4,476,527 - MPMX20_04291 0.57 -1.1 4,476,533 + MPMX20_04291 0.58 -0.3 4,476,533 + MPMX20_04291 0.58 -0.8 4,476,541 - MPMX20_04291 0.58 -0.2 4,476,541 - MPMX20_04291 0.58 +0.4 4,476,599 + MPMX20_04291 0.63 -1.3 4,476,599 + MPMX20_04291 0.63 +1.6 4,476,607 - MPMX20_04291 0.63 -0.1 4,476,607 - MPMX20_04291 0.63 -0.6
Or see this region's nucleotide sequence