Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03303

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03302 and MPMX20_03303 are separated by 89 nucleotidesMPMX20_03303 and MPMX20_03304 overlap by 4 nucleotidesMPMX20_03304 and MPMX20_03305 are separated by 1 nucleotides MPMX20_03302: MPMX20_03302 - HTH-type transcriptional regulator CynR, at 3,470,703 to 3,471,638 _03302 MPMX20_03303: MPMX20_03303 - hypothetical protein, at 3,471,728 to 3,472,723 _03303 MPMX20_03304: MPMX20_03304 - hypothetical protein, at 3,472,720 to 3,472,935 _03304 MPMX20_03305: MPMX20_03305 - DNA ligase, at 3,472,937 to 3,474,952 _03305 Position (kb) 3471 3472 3473Strain fitness (log2 ratio) -3 -2 -1 0 1at 3470.742 kb on + strandat 3470.750 kb on - strandat 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.797 kb on + strand, within MPMX20_03302at 3470.895 kb on + strand, within MPMX20_03302at 3470.943 kb on - strand, within MPMX20_03302at 3470.976 kb on + strand, within MPMX20_03302at 3470.998 kb on - strand, within MPMX20_03302at 3471.057 kb on + strand, within MPMX20_03302at 3471.150 kb on - strand, within MPMX20_03302at 3471.224 kb on - strand, within MPMX20_03302at 3471.239 kb on - strand, within MPMX20_03302at 3471.289 kb on + strand, within MPMX20_03302at 3471.297 kb on - strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.299 kb on + strand, within MPMX20_03302at 3471.301 kb on + strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.307 kb on - strand, within MPMX20_03302at 3471.309 kb on - strand, within MPMX20_03302at 3471.309 kb on - strand, within MPMX20_03302at 3471.309 kb on - strand, within MPMX20_03302at 3471.336 kb on - strand, within MPMX20_03302at 3471.366 kb on - strand, within MPMX20_03302at 3471.386 kb on + strand, within MPMX20_03302at 3471.439 kb on + strand, within MPMX20_03302at 3471.548 kb on + strandat 3471.556 kb on - strandat 3471.593 kb on + strandat 3471.602 kb on - strandat 3471.759 kb on + strandat 3471.787 kb on - strandat 3471.788 kb on + strandat 3471.816 kb on - strandat 3471.835 kb on + strand, within MPMX20_03303at 3471.859 kb on + strand, within MPMX20_03303at 3471.943 kb on + strand, within MPMX20_03303at 3471.961 kb on + strand, within MPMX20_03303at 3472.032 kb on + strand, within MPMX20_03303at 3472.064 kb on - strand, within MPMX20_03303at 3472.119 kb on + strand, within MPMX20_03303at 3472.171 kb on - strand, within MPMX20_03303at 3472.186 kb on + strand, within MPMX20_03303at 3472.397 kb on - strand, within MPMX20_03303at 3472.404 kb on - strand, within MPMX20_03303at 3472.429 kb on + strand, within MPMX20_03303at 3472.434 kb on + strand, within MPMX20_03303at 3472.437 kb on - strand, within MPMX20_03303at 3472.442 kb on - strand, within MPMX20_03303at 3472.461 kb on + strand, within MPMX20_03303at 3472.543 kb on - strand, within MPMX20_03303at 3472.660 kb on - strandat 3472.710 kb on - strandat 3472.763 kb on + strand, within MPMX20_03304at 3472.763 kb on + strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.771 kb on - strand, within MPMX20_03304at 3472.785 kb on - strand, within MPMX20_03304at 3472.944 kb on + strandat 3472.952 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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3,470,742 + +1.0
3,470,750 - -0.1
3,470,797 + MPMX20_03302 0.10 -0.0
3,470,797 + MPMX20_03302 0.10 -0.7
3,470,797 + MPMX20_03302 0.10 -0.0
3,470,797 + MPMX20_03302 0.10 -1.2
3,470,797 + MPMX20_03302 0.10 -0.5
3,470,895 + MPMX20_03302 0.21 +0.2
3,470,943 - MPMX20_03302 0.26 +0.3
3,470,976 + MPMX20_03302 0.29 -0.3
3,470,998 - MPMX20_03302 0.32 +0.8
3,471,057 + MPMX20_03302 0.38 +0.7
3,471,150 - MPMX20_03302 0.48 -0.6
3,471,224 - MPMX20_03302 0.56 -2.6
3,471,239 - MPMX20_03302 0.57 +0.6
3,471,289 + MPMX20_03302 0.63 +1.0
3,471,297 - MPMX20_03302 0.63 +1.4
3,471,299 + MPMX20_03302 0.64 +0.4
3,471,299 + MPMX20_03302 0.64 -1.1
3,471,299 + MPMX20_03302 0.64 +0.6
3,471,299 + MPMX20_03302 0.64 -1.2
3,471,301 + MPMX20_03302 0.64 +1.3
3,471,307 - MPMX20_03302 0.65 -0.1
3,471,307 - MPMX20_03302 0.65 +0.4
3,471,307 - MPMX20_03302 0.65 +0.1
3,471,307 - MPMX20_03302 0.65 -0.1
3,471,307 - MPMX20_03302 0.65 +0.1
3,471,307 - MPMX20_03302 0.65 -0.4
3,471,309 - MPMX20_03302 0.65 -0.5
3,471,309 - MPMX20_03302 0.65 -1.9
3,471,309 - MPMX20_03302 0.65 -0.5
3,471,336 - MPMX20_03302 0.68 +0.1
3,471,366 - MPMX20_03302 0.71 +0.1
3,471,386 + MPMX20_03302 0.73 +0.6
3,471,439 + MPMX20_03302 0.79 -1.3
3,471,548 + -0.0
3,471,556 - -0.2
3,471,593 + +0.9
3,471,602 - +0.4
3,471,759 + -1.0
3,471,787 - -1.0
3,471,788 + -1.2
3,471,816 - -1.6
3,471,835 + MPMX20_03303 0.11 -1.7
3,471,859 + MPMX20_03303 0.13 -0.9
3,471,943 + MPMX20_03303 0.22 -2.0
3,471,961 + MPMX20_03303 0.23 -1.8
3,472,032 + MPMX20_03303 0.31 -2.0
3,472,064 - MPMX20_03303 0.34 -1.0
3,472,119 + MPMX20_03303 0.39 +1.0
3,472,171 - MPMX20_03303 0.44 -0.0
3,472,186 + MPMX20_03303 0.46 -1.0
3,472,397 - MPMX20_03303 0.67 -0.9
3,472,404 - MPMX20_03303 0.68 -1.9
3,472,429 + MPMX20_03303 0.70 -2.2
3,472,434 + MPMX20_03303 0.71 -2.4
3,472,437 - MPMX20_03303 0.71 -1.5
3,472,442 - MPMX20_03303 0.72 -1.7
3,472,461 + MPMX20_03303 0.74 -3.1
3,472,543 - MPMX20_03303 0.82 -0.9
3,472,660 - -0.4
3,472,710 - -0.4
3,472,763 + MPMX20_03304 0.20 +1.1
3,472,763 + MPMX20_03304 0.20 -1.6
3,472,771 - MPMX20_03304 0.24 -1.4
3,472,771 - MPMX20_03304 0.24 -0.8
3,472,771 - MPMX20_03304 0.24 +0.3
3,472,771 - MPMX20_03304 0.24 +1.2
3,472,785 - MPMX20_03304 0.30 -0.0
3,472,944 + -3.7
3,472,952 - -0.3

Or see this region's nucleotide sequence