Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02777

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02776 and MPMX20_02777 are separated by 184 nucleotidesMPMX20_02777 and MPMX20_02778 are separated by 76 nucleotidesMPMX20_02778 and MPMX20_02779 are separated by 239 nucleotides MPMX20_02776: MPMX20_02776 - tRNA U34 carboxymethyltransferase, at 2,929,827 to 2,930,798 _02776 MPMX20_02777: MPMX20_02777 - Copper homeostasis protein CutC, at 2,930,983 to 2,931,726 _02777 MPMX20_02778: MPMX20_02778 - Protein YecM, at 2,931,803 to 2,932,363 _02778 MPMX20_02779: MPMX20_02779 - Arginine--tRNA ligase, at 2,932,603 to 2,934,336 _02779 Position (kb) 2930 2931 2932Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2929.993 kb on + strand, within MPMX20_02776at 2929.993 kb on + strand, within MPMX20_02776at 2929.993 kb on + strand, within MPMX20_02776at 2930.011 kb on - strand, within MPMX20_02776at 2930.034 kb on - strand, within MPMX20_02776at 2930.093 kb on + strand, within MPMX20_02776at 2930.134 kb on - strand, within MPMX20_02776at 2930.156 kb on - strand, within MPMX20_02776at 2930.187 kb on - strand, within MPMX20_02776at 2930.187 kb on - strand, within MPMX20_02776at 2930.206 kb on - strand, within MPMX20_02776at 2930.276 kb on + strand, within MPMX20_02776at 2930.284 kb on - strand, within MPMX20_02776at 2930.296 kb on + strand, within MPMX20_02776at 2930.314 kb on - strand, within MPMX20_02776at 2930.332 kb on + strand, within MPMX20_02776at 2930.354 kb on + strand, within MPMX20_02776at 2930.373 kb on - strand, within MPMX20_02776at 2930.653 kb on + strand, within MPMX20_02776at 2930.673 kb on - strand, within MPMX20_02776at 2930.683 kb on - strand, within MPMX20_02776at 2930.745 kb on + strandat 2930.745 kb on + strandat 2930.753 kb on - strandat 2930.775 kb on + strandat 2930.783 kb on - strandat 2930.815 kb on + strandat 2930.815 kb on + strandat 2930.823 kb on - strandat 2930.845 kb on + strandat 2930.847 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.875 kb on + strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.883 kb on - strandat 2930.884 kb on - strandat 2930.884 kb on - strandat 2930.946 kb on - strandat 2931.033 kb on + strandat 2931.042 kb on - strandat 2931.044 kb on - strandat 2931.144 kb on + strand, within MPMX20_02777at 2931.155 kb on - strand, within MPMX20_02777at 2931.155 kb on - strand, within MPMX20_02777at 2931.192 kb on + strand, within MPMX20_02777at 2931.192 kb on + strand, within MPMX20_02777at 2931.259 kb on + strand, within MPMX20_02777at 2931.274 kb on + strand, within MPMX20_02777at 2931.292 kb on - strand, within MPMX20_02777at 2931.395 kb on + strand, within MPMX20_02777at 2931.476 kb on + strand, within MPMX20_02777at 2931.648 kb on + strand, within MPMX20_02777at 2931.662 kb on + strandat 2931.691 kb on + strandat 2931.698 kb on - strandat 2931.771 kb on + strandat 2931.771 kb on + strandat 2931.771 kb on + strandat 2931.771 kb on + strandat 2931.788 kb on + strandat 2931.848 kb on - strandat 2931.860 kb on - strand, within MPMX20_02778at 2931.880 kb on + strand, within MPMX20_02778at 2931.885 kb on + strand, within MPMX20_02778at 2931.888 kb on - strand, within MPMX20_02778at 2931.893 kb on - strand, within MPMX20_02778at 2931.947 kb on + strand, within MPMX20_02778at 2931.955 kb on - strand, within MPMX20_02778at 2931.955 kb on - strand, within MPMX20_02778at 2931.955 kb on - strand, within MPMX20_02778at 2931.955 kb on - strand, within MPMX20_02778at 2931.955 kb on - strand, within MPMX20_02778at 2931.966 kb on - strand, within MPMX20_02778at 2931.992 kb on - strand, within MPMX20_02778at 2932.028 kb on + strand, within MPMX20_02778at 2932.062 kb on + strand, within MPMX20_02778at 2932.119 kb on + strand, within MPMX20_02778at 2932.137 kb on - strand, within MPMX20_02778at 2932.180 kb on + strand, within MPMX20_02778at 2932.180 kb on + strand, within MPMX20_02778at 2932.180 kb on + strand, within MPMX20_02778at 2932.188 kb on - strand, within MPMX20_02778at 2932.188 kb on - strand, within MPMX20_02778at 2932.188 kb on - strand, within MPMX20_02778at 2932.245 kb on + strand, within MPMX20_02778at 2932.253 kb on - strand, within MPMX20_02778at 2932.253 kb on - strand, within MPMX20_02778at 2932.262 kb on + strand, within MPMX20_02778at 2932.270 kb on - strand, within MPMX20_02778at 2932.380 kb on - strandat 2932.406 kb on + strandat 2932.414 kb on - strandat 2932.425 kb on + strandat 2932.498 kb on - strandat 2932.500 kb on + strandat 2932.530 kb on + strandat 2932.538 kb on - strandat 2932.538 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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2,929,993 + MPMX20_02776 0.17 -1.7
2,929,993 + MPMX20_02776 0.17 -0.8
2,929,993 + MPMX20_02776 0.17 -2.2
2,930,011 - MPMX20_02776 0.19 -1.5
2,930,034 - MPMX20_02776 0.21 -0.6
2,930,093 + MPMX20_02776 0.27 -0.4
2,930,134 - MPMX20_02776 0.32 -1.6
2,930,156 - MPMX20_02776 0.34 -1.3
2,930,187 - MPMX20_02776 0.37 -0.4
2,930,187 - MPMX20_02776 0.37 -2.4
2,930,206 - MPMX20_02776 0.39 -0.1
2,930,276 + MPMX20_02776 0.46 -0.8
2,930,284 - MPMX20_02776 0.47 -1.1
2,930,296 + MPMX20_02776 0.48 +2.0
2,930,314 - MPMX20_02776 0.50 -1.0
2,930,332 + MPMX20_02776 0.52 -0.7
2,930,354 + MPMX20_02776 0.54 -1.0
2,930,373 - MPMX20_02776 0.56 -1.5
2,930,653 + MPMX20_02776 0.85 +0.0
2,930,673 - MPMX20_02776 0.87 -0.5
2,930,683 - MPMX20_02776 0.88 -1.5
2,930,745 + -1.5
2,930,745 + +0.7
2,930,753 - -2.1
2,930,775 + -4.6
2,930,783 - -0.5
2,930,815 + -0.4
2,930,815 + +0.1
2,930,823 - -0.0
2,930,845 + +0.1
2,930,847 + -1.2
2,930,875 + +0.8
2,930,875 + +0.3
2,930,875 + -0.0
2,930,875 + -2.1
2,930,875 + +0.2
2,930,875 + -0.2
2,930,875 + +0.2
2,930,883 - +1.5
2,930,883 - -0.1
2,930,883 - -0.1
2,930,883 - -0.2
2,930,883 - -0.3
2,930,883 - -0.1
2,930,883 - +0.3
2,930,883 - -0.9
2,930,884 - -0.0
2,930,884 - -0.6
2,930,946 - -0.3
2,931,033 + +0.2
2,931,042 - +0.2
2,931,044 - +0.9
2,931,144 + MPMX20_02777 0.22 +0.1
2,931,155 - MPMX20_02777 0.23 -1.1
2,931,155 - MPMX20_02777 0.23 -0.1
2,931,192 + MPMX20_02777 0.28 +0.1
2,931,192 + MPMX20_02777 0.28 +0.4
2,931,259 + MPMX20_02777 0.37 -0.0
2,931,274 + MPMX20_02777 0.39 -0.7
2,931,292 - MPMX20_02777 0.42 +0.3
2,931,395 + MPMX20_02777 0.55 +0.1
2,931,476 + MPMX20_02777 0.66 +1.2
2,931,648 + MPMX20_02777 0.89 -0.1
2,931,662 + +1.4
2,931,691 + -0.1
2,931,698 - +0.7
2,931,771 + -0.2
2,931,771 + +0.8
2,931,771 + +0.1
2,931,771 + +0.1
2,931,788 + -0.3
2,931,848 - -1.8
2,931,860 - MPMX20_02778 0.10 -0.1
2,931,880 + MPMX20_02778 0.14 +0.5
2,931,885 + MPMX20_02778 0.15 -2.1
2,931,888 - MPMX20_02778 0.15 +0.1
2,931,893 - MPMX20_02778 0.16 +0.0
2,931,947 + MPMX20_02778 0.26 +0.5
2,931,955 - MPMX20_02778 0.27 -0.7
2,931,955 - MPMX20_02778 0.27 +0.9
2,931,955 - MPMX20_02778 0.27 +1.6
2,931,955 - MPMX20_02778 0.27 -1.1
2,931,955 - MPMX20_02778 0.27 -0.1
2,931,966 - MPMX20_02778 0.29 -0.2
2,931,992 - MPMX20_02778 0.34 -1.4
2,932,028 + MPMX20_02778 0.40 -0.8
2,932,062 + MPMX20_02778 0.46 -0.5
2,932,119 + MPMX20_02778 0.56 -0.4
2,932,137 - MPMX20_02778 0.60 -1.0
2,932,180 + MPMX20_02778 0.67 +1.0
2,932,180 + MPMX20_02778 0.67 -0.1
2,932,180 + MPMX20_02778 0.67 -0.6
2,932,188 - MPMX20_02778 0.69 +0.7
2,932,188 - MPMX20_02778 0.69 +2.0
2,932,188 - MPMX20_02778 0.69 +0.5
2,932,245 + MPMX20_02778 0.79 -0.5
2,932,253 - MPMX20_02778 0.80 +0.3
2,932,253 - MPMX20_02778 0.80 -0.9
2,932,262 + MPMX20_02778 0.82 -0.4
2,932,270 - MPMX20_02778 0.83 +1.1
2,932,380 - +0.2
2,932,406 + +1.6
2,932,414 - +0.1
2,932,425 + -0.4
2,932,498 - +0.1
2,932,500 + +0.3
2,932,530 + -0.1
2,932,538 - +0.4
2,932,538 - +0.9

Or see this region's nucleotide sequence